RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MAP1LC3CQ9BXW4 147 aa6.58□□□□□ -1.36
VTI1A-208ENST00000494728 PLNP26678 52 aa6.57□□□□□ -1.36
VTI1A-208ENST00000494728 DDTP30046 118 aa6.57□□□□□ -1.36
VTI1A-208ENST00000494728 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
VTI1A-208ENST00000494728 GAGE2AQ6NT46 116 aa6.57□□□□□ -1.36
VTI1A-208ENST00000494728 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
VTI1A-208ENST00000494728 DPM2O94777 84 aa6.56□□□□□ -1.36
VTI1A-208ENST00000494728 NPC2P61916 151 aa6.56□□□□□ -1.36
VTI1A-208ENST00000494728 TRBV10-2A0A0K0K1G8 114 aa6.55□□□□□ -1.36
VTI1A-208ENST00000494728 IGLV6-57P01721 117 aa6.55□□□□□ -1.36
VTI1A-208ENST00000494728 IGKCP01834 107 aa6.55□□□□□ -1.36
VTI1A-208ENST00000494728 MOBPQ13875 183 aa6.55□□□□□ -1.36
VTI1A-208ENST00000494728 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
VTI1A-208ENST00000494728 Q6ZRX8 168 aa6.55□□□□□ -1.36
VTI1A-208ENST00000494728 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-208ENST00000494728 IGLV9-49A0A0B4J1Y8 123 aa6.54□□□□□ -1.36
VTI1A-208ENST00000494728 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
VTI1A-208ENST00000494728 SYS1-DBNDD2H3BUS1 97 aa6.54□□□□□ -1.36
VTI1A-208ENST00000494728 HERVK_113P61574 105 aa6.54□□□□□ -1.36
VTI1A-208ENST00000494728 FP248Q71RG6 208 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-208ENST00000494728 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
VTI1A-208ENST00000494728 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
VTI1A-208ENST00000494728 LGALS3P17931 250 aaKnown RBP6.53□□□□□ -1.36
VTI1A-208ENST00000494728 COA6Q5JTJ3 125 aaKnown RBP6.53□□□□□ -1.36
VTI1A-208ENST00000494728 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
VTI1A-208ENST00000494728 SPINK1P00995 79 aa6.52□□□□□ -1.37
VTI1A-208ENST00000494728 NMUP48645 174 aa6.52□□□□□ -1.37
VTI1A-208ENST00000494728 Q8N377 158 aa6.52□□□□□ -1.37
VTI1A-208ENST00000494728 NDUFC2O95298 119 aa6.51□□□□□ -1.37
VTI1A-208ENST00000494728 KRTDAPP60985 99 aa6.51□□□□□ -1.37
VTI1A-208ENST00000494728 ST20-AS1Q8NBB2 130 aa6.51□□□□□ -1.37
VTI1A-208ENST00000494728 LITAFQ99732 161 aa6.51□□□□□ -1.37
VTI1A-208ENST00000494728 MIEN1Q9BRT3 115 aa6.51□□□□□ -1.37
VTI1A-208ENST00000494728 E9PLD3 99 aa6.5□□□□□ -1.37
VTI1A-208ENST00000494728 C3orf79P0CE67 100 aa6.5□□□□□ -1.37
VTI1A-208ENST00000494728 S100A7L2Q5SY68 101 aa6.5□□□□□ -1.37
VTI1A-208ENST00000494728 PET117Q6UWS5 81 aa6.5□□□□□ -1.37
VTI1A-208ENST00000494728 ZNF73O43830 326 aaPredicted RBP6.49□□□□□ -1.37
VTI1A-208ENST00000494728 S100A12P80511 92 aa6.49□□□□□ -1.37
VTI1A-208ENST00000494728 ASB16-AS1Q495Z4 193 aa6.49□□□□□ -1.37
VTI1A-208ENST00000494728 LINC01545Q5VT33 79 aa6.49□□□□□ -1.37
VTI1A-208ENST00000494728 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
VTI1A-208ENST00000494728 TTTY13Q9BZ97 58 aa6.48□□□□□ -1.37
VTI1A-208ENST00000494728 SSBP3-AS1Q7Z2R9 100 aa6.47□□□□□ -1.37
VTI1A-208ENST00000494728 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
VTI1A-208ENST00000494728 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
VTI1A-208ENST00000494728 S100A2P29034 98 aa6.46□□□□□ -1.38
VTI1A-208ENST00000494728 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
VTI1A-208ENST00000494728 LINC00308Q8TCZ7 52 aa6.46□□□□□ -1.38
VTI1A-208ENST00000494728 C20orf202A1L168 122 aa6.45□□□□□ -1.38
VTI1A-208ENST00000494728 S100A6P06703 90 aa6.45□□□□□ -1.38
VTI1A-208ENST00000494728 ATOH7Q8N100 152 aa6.45□□□□□ -1.38
VTI1A-208ENST00000494728 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
VTI1A-208ENST00000494728 JOSD1Q15040 202 aaPredicted RBP6.44□□□□□ -1.38
VTI1A-208ENST00000494728 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
VTI1A-208ENST00000494728 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
VTI1A-208ENST00000494728 SLC25A20O43772 301 aa6.43□□□□□ -1.38
VTI1A-208ENST00000494728 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
VTI1A-208ENST00000494728 HIST1H2BLQ99880 126 aa6.43□□□□□ -1.38
VTI1A-208ENST00000494728 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
VTI1A-208ENST00000494728 TIMM17BO60830 172 aa6.42□□□□□ -1.38
VTI1A-208ENST00000494728 SPRR1BP22528 89 aa6.41□□□□□ -1.38
VTI1A-208ENST00000494728 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
VTI1A-208ENST00000494728 ELOF1P60002 83 aaKnown RBP6.4□□□□□ -1.38
VTI1A-208ENST00000494728 SNRPEP62304 92 aaKnown RBP6.4□□□□□ -1.38
VTI1A-208ENST00000494728 ANKRD39Q53RE8 183 aa6.4□□□□□ -1.38
VTI1A-208ENST00000494728 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.38
VTI1A-208ENST00000494728 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
VTI1A-208ENST00000494728 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
VTI1A-208ENST00000494728 HRCT1Q6UXD1 115 aa6.39□□□□□ -1.39
VTI1A-208ENST00000494728 C5orf52A6NGY3 159 aa6.38□□□□□ -1.39
VTI1A-208ENST00000494728 COX7BP24311 80 aa6.37□□□□□ -1.39
VTI1A-208ENST00000494728 AKR1D1P51857 326 aa6.37□□□□□ -1.39
VTI1A-208ENST00000494728 Q1RN00 199 aa6.37□□□□□ -1.39
VTI1A-208ENST00000494728 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
VTI1A-208ENST00000494728 SCGB1D4Q6XE38 83 aa6.37□□□□□ -1.39
VTI1A-208ENST00000494728 DHRS4-AS1Q9P1J3 65 aa6.37□□□□□ -1.39
VTI1A-208ENST00000494728 HINT1P49773 126 aaPredicted RBP6.36□□□□□ -1.39
VTI1A-208ENST00000494728 PCP2Q8IVA1 136 aa6.36□□□□□ -1.39
VTI1A-208ENST00000494728 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
VTI1A-208ENST00000494728 A6NJY4 79 aa6.35□□□□□ -1.39
VTI1A-208ENST00000494728 LINC01547P58512 204 aaPredicted RBP6.35□□□□□ -1.39
VTI1A-208ENST00000494728 SMIM29Q86T20 159 aa6.35□□□□□ -1.39
VTI1A-208ENST00000494728 C9orf92A6NGG3 77 aa6.34□□□□□ -1.39
VTI1A-208ENST00000494728 HSBP1L1C9JCN9 74 aa6.34□□□□□ -1.39
VTI1A-208ENST00000494728 SCGB1D1O95968 90 aa6.34□□□□□ -1.39
VTI1A-208ENST00000494728 DEFB105AQ8NG35 78 aa6.34□□□□□ -1.39
VTI1A-208ENST00000494728 CBY1Q9Y3M2 126 aa6.34□□□□□ -1.39
VTI1A-208ENST00000494728 H7C2G1 150 aa6.33□□□□□ -1.4
VTI1A-208ENST00000494728 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
VTI1A-208ENST00000494728 LAMTOR3Q9UHA4 124 aa6.33□□□□□ -1.4
VTI1A-208ENST00000494728 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
VTI1A-208ENST00000494728 PCOTHQ58A44 107 aa6.32□□□□□ -1.4
VTI1A-208ENST00000494728 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
VTI1A-208ENST00000494728 IGLV5-48A0A075B6I7 105 aa6.31□□□□□ -1.4
VTI1A-208ENST00000494728 SLC25A34Q6PIV7 304 aa6.31□□□□□ -1.4
VTI1A-208ENST00000494728 FSIP2Q5CZC0 6907 aa6.3□□□□□ -1.4
VTI1A-208ENST00000494728 TRBV7-6A0A0J9YX20 115 aa6.3□□□□□ -1.4
VTI1A-208ENST00000494728 TEX49A0A1B0GTD5 131 aa6.3□□□□□ -1.4
VTI1A-208ENST00000494728 TAL2Q16559 108 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms