RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SS18Q15532 418 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 Q9HAA7 133 aa7.22□□□□□ -1.25
PDLIM1-205ENST00000493949 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 USP17L23D6RBM5 183 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 LINC00612Q8N6U2 182 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 UPK3BQ9BT76 320 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 C14orf132Q9NPU4 83 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 C6orf226Q5I0X4 101 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 SMIM9A6NGZ8 99 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 PRM2P04554 102 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 FHL2Q14192 279 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 Q8N814 137 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 CSNK1G2-AS1Q8NCQ2 148 aa7.18□□□□□ -1.26
PDLIM1-205ENST00000493949 IGLV4-60A0A075B6I1 120 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 Q6ZTC4 211 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 Q8NAQ8 132 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 FAT1Q14517 4588 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 LOC100131303A0A0U1RQF7 123 aa7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 GIG44P09565 113 aaPredicted RBP7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 LOC107984640A0A0U1RRK4 108 aa7.15□□□□□ -1.26
PDLIM1-205ENST00000493949 IGKV3D-7A0A0C4DH55 119 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 NCR3O14931 201 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 PFN2P35080 140 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 ATP5EP56381 51 aaPredicted RBP7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 CXCL6P80162 114 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 FAM19A5Q7Z5A7 132 aaPredicted RBP7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 DPH3Q96FX2 82 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 PRO0255Q9UI72 69 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 LYRM9A8MSI8 78 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 NDUFC1O43677 76 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 CELA1Q9UNI1 258 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 DEFB131BA0A096LNP1 70 aa7.12□□□□□ -1.27
PDLIM1-205ENST00000493949 LINC00575Q6W349 94 aa7.12□□□□□ -1.27
PDLIM1-205ENST00000493949 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 MIFP14174 115 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 RBM3P98179 157 aaKnown RBP7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 C9orf129Q5T035 196 aaKnown RBP7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 UBE2DNLQ8IWF7 75 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 KRTAP4-2Q9BYR5 136 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 Q6ZQT0 140 aa7.1□□□□□ -1.27
PDLIM1-205ENST00000493949 GYPEP15421 78 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 KLKP1Q107X0 134 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 Q5VSD8 79 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 X6R8D5 127 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 XCL1P47992 114 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 SERP1Q9Y6X1 66 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
PDLIM1-205ENST00000493949 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
PDLIM1-205ENST00000493949 C6orf99Q4VX62 202 aa7.07□□□□□ -1.28
PDLIM1-205ENST00000493949 A0A087WVE0 104 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 A0A1B0GW54 56 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 F8WDY8 70 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 SLPIP03973 132 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 SERTAD4-AS1Q5TG53 156 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 CHCHD10Q8WYQ3 142 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 KRTAP10-2P60368 255 aa7.05□□□□□ -1.28
PDLIM1-205ENST00000493949 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
PDLIM1-205ENST00000493949 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
PDLIM1-205ENST00000493949 REG3AQ06141 175 aa7.04□□□□□ -1.28
PDLIM1-205ENST00000493949 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
PDLIM1-205ENST00000493949 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
PDLIM1-205ENST00000493949 LINC01547P58512 204 aaPredicted RBP7.03□□□□□ -1.28
PDLIM1-205ENST00000493949 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
PDLIM1-205ENST00000493949 TRAV23DV6A0A075B6W5 121 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 SPAG11BQ08648 103 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 LELP1Q5T871 98 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 Q6ZVQ6 151 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 DEFB130BP0DP73 79 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 DEFB130AP0DP74 79 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
PDLIM1-205ENST00000493949 H7BZZ5 65 aa7□□□□□ -1.29
PDLIM1-205ENST00000493949 ANGP03950 147 aaKnown RBP7□□□□□ -1.29
PDLIM1-205ENST00000493949 FAM19A1Q7Z5A9 133 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms