RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
ACTB-213ENST00000493945 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
ACTB-213ENST00000493945 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
ACTB-213ENST00000493945 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
ACTB-213ENST00000493945 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
ACTB-213ENST00000493945 CFC1P0CG37 223 aa9.23□□□□□ -0.93
ACTB-213ENST00000493945 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
ACTB-213ENST00000493945 BVES-AS1Q5T3Y7 98 aa9.22□□□□□ -0.93
ACTB-213ENST00000493945 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.94
ACTB-213ENST00000493945 H0Y9J4 135 aa9.21□□□□□ -0.94
ACTB-213ENST00000493945 SNCGO76070 127 aa9.21□□□□□ -0.94
ACTB-213ENST00000493945 SPRR1AP35321 89 aa9.21□□□□□ -0.94
ACTB-213ENST00000493945 A0A1B0GWB2 263 aa9.2□□□□□ -0.94
ACTB-213ENST00000493945 H7C2G1 150 aa9.2□□□□□ -0.94
ACTB-213ENST00000493945 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
ACTB-213ENST00000493945 RYR1P21817 5038 aa9.19□□□□□ -0.94
ACTB-213ENST00000493945 ZNF861PO60384 105 aa9.19□□□□□ -0.94
ACTB-213ENST00000493945 SLC25A20O43772 301 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 COX6CP09669 75 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 COX7BP24311 80 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 BATFQ16520 125 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 Q6ZRX8 168 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
ACTB-213ENST00000493945 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
ACTB-213ENST00000493945 PSMB2P49721 201 aa9.16□□□□□ -0.94
ACTB-213ENST00000493945 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
ACTB-213ENST00000493945 PRLHP81277 87 aa9.16□□□□□ -0.94
ACTB-213ENST00000493945 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
ACTB-213ENST00000493945 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.94
ACTB-213ENST00000493945 B5MCH6 92 aa9.15□□□□□ -0.94
ACTB-213ENST00000493945 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
ACTB-213ENST00000493945 HSPG2P98160 4391 aa9.14□□□□□ -0.95
ACTB-213ENST00000493945 PCP4L1A6NKN8 68 aa9.14□□□□□ -0.95
ACTB-213ENST00000493945 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
ACTB-213ENST00000493945 H0YGX0 51 aa9.14□□□□□ -0.95
ACTB-213ENST00000493945 K7ERJ3 54 aa9.14□□□□□ -0.95
ACTB-213ENST00000493945 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
ACTB-213ENST00000493945 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
ACTB-213ENST00000493945 GHRHP01286 108 aa9.11□□□□□ -0.95
ACTB-213ENST00000493945 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
ACTB-213ENST00000493945 TSPAN13O95857 204 aa9.1□□□□□ -0.95
ACTB-213ENST00000493945 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
ACTB-213ENST00000493945 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
ACTB-213ENST00000493945 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
ACTB-213ENST00000493945 A0A1B0GX51 115 aa9.07□□□□□ -0.96
ACTB-213ENST00000493945 TRIAP1O43715 76 aa9.07□□□□□ -0.96
ACTB-213ENST00000493945 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
ACTB-213ENST00000493945 SMCR5Q8TEV8 140 aa9.07□□□□□ -0.96
ACTB-213ENST00000493945 hADV29S1A0JD25 119 aa9.06□□□□□ -0.96
ACTB-213ENST00000493945 DNAL4O96015 105 aa9.06□□□□□ -0.96
ACTB-213ENST00000493945 LINC00575Q6W349 94 aa9.05□□□□□ -0.96
ACTB-213ENST00000493945 Q9BRP9 147 aa9.05□□□□□ -0.96
ACTB-213ENST00000493945 SNHG12Q9BXW3 62 aa9.04□□□□□ -0.96
ACTB-213ENST00000493945 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
ACTB-213ENST00000493945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
ACTB-213ENST00000493945 FAT1Q14517 4588 aa9.02□□□□□ -0.96
ACTB-213ENST00000493945 H3BQ85 93 aa9.02□□□□□ -0.97
ACTB-213ENST00000493945 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
ACTB-213ENST00000493945 SPRR4Q96PI1 79 aa9.01□□□□□ -0.97
ACTB-213ENST00000493945 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
ACTB-213ENST00000493945 HERC2O95714 4834 aa9□□□□□ -0.97
ACTB-213ENST00000493945 C9orf118A6NHY6 69 aa9□□□□□ -0.97
ACTB-213ENST00000493945 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
ACTB-213ENST00000493945 TRBV20-1A0A075B6N2 111 aa8.99□□□□□ -0.97
ACTB-213ENST00000493945 H3BUT2 72 aa8.99□□□□□ -0.97
ACTB-213ENST00000493945 CRYGAP11844 174 aa8.99□□□□□ -0.97
ACTB-213ENST00000493945 FABP2P12104 132 aa8.99□□□□□ -0.97
ACTB-213ENST00000493945 ATXN8Q156A1 80 aa8.99□□□□□ -0.97
ACTB-213ENST00000493945 GAGE2AQ6NT46 116 aa8.99□□□□□ -0.97
ACTB-213ENST00000493945 TEX49A0A1B0GTD5 131 aa8.98□□□□□ -0.97
ACTB-213ENST00000493945 OXTP01178 125 aa8.98□□□□□ -0.97
ACTB-213ENST00000493945 Q6ZQY7 126 aa8.98□□□□□ -0.97
ACTB-213ENST00000493945 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
ACTB-213ENST00000493945 TRACP01848 142 aa8.97□□□□□ -0.97
ACTB-213ENST00000493945 CLEC2BQ92478 149 aa8.97□□□□□ -0.97
ACTB-213ENST00000493945 LAMTOR3Q9UHA4 124 aa8.97□□□□□ -0.97
ACTB-213ENST00000493945 F8WEM9 126 aa8.96□□□□□ -0.98
ACTB-213ENST00000493945 TAX1BP3O14907 124 aa8.96□□□□□ -0.98
ACTB-213ENST00000493945 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
ACTB-213ENST00000493945 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
ACTB-213ENST00000493945 A0A1W2PPM0 123 aa8.95□□□□□ -0.98
ACTB-213ENST00000493945 LST1O00453 97 aa8.95□□□□□ -0.98
ACTB-213ENST00000493945 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
ACTB-213ENST00000493945 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
ACTB-213ENST00000493945 SPRR1BP22528 89 aa8.94□□□□□ -0.98
ACTB-213ENST00000493945 NAA38Q9BRA0 125 aaKnown RBP8.94□□□□□ -0.98
ACTB-213ENST00000493945 ST20-AS1Q8NBB2 130 aa8.93□□□□□ -0.98
ACTB-213ENST00000493945 LINC01600Q96MT4 127 aa8.93□□□□□ -0.98
ACTB-213ENST00000493945 FAM218AQ96MZ4 157 aa8.93□□□□□ -0.98
ACTB-213ENST00000493945 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
ACTB-213ENST00000493945 KRTAP4-5Q9BYR2 181 aa8.93□□□□□ -0.98
ACTB-213ENST00000493945 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
ACTB-213ENST00000493945 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
ACTB-213ENST00000493945 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.98
ACTB-213ENST00000493945 FLG2Q5D862 2391 aaPredicted RBP8.9□□□□□ -0.98
ACTB-213ENST00000493945 C9orf153Q5TBE3 101 aa8.9□□□□□ -0.98
ACTB-213ENST00000493945 TYMSOSQ8TAI1 123 aa8.9□□□□□ -0.98
ACTB-213ENST00000493945 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms