RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
MSH6-208ENST00000493177 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
MSH6-208ENST00000493177 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
MSH6-208ENST00000493177 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
MSH6-208ENST00000493177 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
MSH6-208ENST00000493177 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
MSH6-208ENST00000493177 H7C2G1 150 aa8.33□□□□□ -1.08
MSH6-208ENST00000493177 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
MSH6-208ENST00000493177 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
MSH6-208ENST00000493177 K7ERJ3 54 aa8.32□□□□□ -1.08
MSH6-208ENST00000493177 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
MSH6-208ENST00000493177 CBY1Q9Y3M2 126 aa8.32□□□□□ -1.08
MSH6-208ENST00000493177 PRYO14603 147 aa8.31□□□□□ -1.08
MSH6-208ENST00000493177 OXTP01178 125 aa8.31□□□□□ -1.08
MSH6-208ENST00000493177 Q1RN00 199 aa8.31□□□□□ -1.08
MSH6-208ENST00000493177 REG3GQ6UW15 175 aa8.31□□□□□ -1.08
MSH6-208ENST00000493177 PRO1854Q9UHT4 67 aa8.31□□□□□ -1.08
MSH6-208ENST00000493177 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
MSH6-208ENST00000493177 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
MSH6-208ENST00000493177 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
MSH6-208ENST00000493177 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
MSH6-208ENST00000493177 SMIM11BQ8TCY0 68 aa8.28□□□□□ -1.08
MSH6-208ENST00000493177 DIRC1Q969H9 104 aa8.28□□□□□ -1.08
MSH6-208ENST00000493177 SRRM2Q9UQ35 2752 aaKnown RBP8.28□□□□□ -1.08
MSH6-208ENST00000493177 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
MSH6-208ENST00000493177 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
MSH6-208ENST00000493177 FAM19A1Q7Z5A9 133 aa8.27□□□□□ -1.09
MSH6-208ENST00000493177 BCE1O60756 84 aa8.26□□□□□ -1.09
MSH6-208ENST00000493177 C6orf99Q4VX62 202 aa8.26□□□□□ -1.09
MSH6-208ENST00000493177 UBE2AP49459 152 aa8.25□□□□□ -1.09
MSH6-208ENST00000493177 SNHG12Q9BXW3 62 aa8.25□□□□□ -1.09
MSH6-208ENST00000493177 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
MSH6-208ENST00000493177 SPRR1AP35321 89 aa8.24□□□□□ -1.09
MSH6-208ENST00000493177 PSMB2P49721 201 aa8.24□□□□□ -1.09
MSH6-208ENST00000493177 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
MSH6-208ENST00000493177 TSPAN13O95857 204 aa8.23□□□□□ -1.09
MSH6-208ENST00000493177 COX7BP24311 80 aa8.23□□□□□ -1.09
MSH6-208ENST00000493177 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
MSH6-208ENST00000493177 PRLHP81277 87 aa8.23□□□□□ -1.09
MSH6-208ENST00000493177 VAMP3Q15836 100 aa8.23□□□□□ -1.09
MSH6-208ENST00000493177 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
MSH6-208ENST00000493177 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
MSH6-208ENST00000493177 B5MCH6 92 aa8.21□□□□□ -1.1
MSH6-208ENST00000493177 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
MSH6-208ENST00000493177 TRIAP1O43715 76 aa8.2□□□□□ -1.1
MSH6-208ENST00000493177 TRBV7-6A0A0J9YX20 115 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 ZNF861PO60384 105 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 COX6CP09669 75 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
MSH6-208ENST00000493177 COL5A1-AS1Q5SY13 56 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 Q6ZRX8 168 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
MSH6-208ENST00000493177 HIGD2AQ9BW72 106 aa8.19□□□□□ -1.1
MSH6-208ENST00000493177 TAX1BP3O14907 124 aa8.17□□□□□ -1.1
MSH6-208ENST00000493177 H0Y9J4 135 aa8.16□□□□□ -1.1
MSH6-208ENST00000493177 H0YGX0 51 aa8.16□□□□□ -1.1
MSH6-208ENST00000493177 H3BUT2 72 aa8.16□□□□□ -1.1
MSH6-208ENST00000493177 SLC25A20O43772 301 aa8.16□□□□□ -1.1
MSH6-208ENST00000493177 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
MSH6-208ENST00000493177 HERC1Q15751 4861 aa8.15□□□□□ -1.1
MSH6-208ENST00000493177 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
MSH6-208ENST00000493177 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.1
MSH6-208ENST00000493177 DHRS4-AS1Q9P1J3 65 aa8.15□□□□□ -1.1
MSH6-208ENST00000493177 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
MSH6-208ENST00000493177 Q9BRP9 147 aa8.14□□□□□ -1.11
MSH6-208ENST00000493177 SNCGO76070 127 aa8.13□□□□□ -1.11
MSH6-208ENST00000493177 LYRM7Q5U5X0 104 aa8.13□□□□□ -1.11
MSH6-208ENST00000493177 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
MSH6-208ENST00000493177 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
MSH6-208ENST00000493177 hADV29S1A0JD25 119 aa8.12□□□□□ -1.11
MSH6-208ENST00000493177 LRP1Q07954 4544 aaKnown RBP8.12□□□□□ -1.11
MSH6-208ENST00000493177 ERC2-IT1O76042 136 aa8.11□□□□□ -1.11
MSH6-208ENST00000493177 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
MSH6-208ENST00000493177 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
MSH6-208ENST00000493177 A0A1W2PPM0 123 aa8.1□□□□□ -1.11
MSH6-208ENST00000493177 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
MSH6-208ENST00000493177 FABP2P12104 132 aa8.09□□□□□ -1.11
MSH6-208ENST00000493177 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
MSH6-208ENST00000493177 A0A1B0GX51 115 aa8.08□□□□□ -1.12
MSH6-208ENST00000493177 ST20-AS1Q8NBB2 130 aa8.08□□□□□ -1.12
MSH6-208ENST00000493177 TCL1BO95988 128 aa8.07□□□□□ -1.12
MSH6-208ENST00000493177 DNAL4O96015 105 aa8.07□□□□□ -1.12
MSH6-208ENST00000493177 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
MSH6-208ENST00000493177 DEFB105AQ8NG35 78 aa8.07□□□□□ -1.12
MSH6-208ENST00000493177 LST1O00453 97 aa8.06□□□□□ -1.12
MSH6-208ENST00000493177 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
MSH6-208ENST00000493177 Q6ZQY7 126 aa8.06□□□□□ -1.12
MSH6-208ENST00000493177 SPRR4Q96PI1 79 aa8.06□□□□□ -1.12
MSH6-208ENST00000493177 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.05□□□□□ -1.12
MSH6-208ENST00000493177 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
MSH6-208ENST00000493177 SPCS1Q9Y6A9 102 aa8.04□□□□□ -1.12
MSH6-208ENST00000493177 TRACP01848 142 aa8.03□□□□□ -1.12
MSH6-208ENST00000493177 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
MSH6-208ENST00000493177 TEX49A0A1B0GTD5 131 aa8.01□□□□□ -1.13
MSH6-208ENST00000493177 OCIAD2Q56VL3 154 aa8.01□□□□□ -1.13
MSH6-208ENST00000493177 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
MSH6-208ENST00000493177 GHRHP01286 108 aa8□□□□□ -1.13
MSH6-208ENST00000493177 KRTAP10-8P60410 259 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms