RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 M0R2T5 61 aa7.34□□□□□ -1.23
SAMM50-204ENST00000493161 LEPROTO15243 131 aa7.34□□□□□ -1.23
SAMM50-204ENST00000493161 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
SAMM50-204ENST00000493161 JOSD1Q15040 202 aaPredicted RBP7.34□□□□□ -1.23
SAMM50-204ENST00000493161 SOSTDC1Q6X4U4 206 aa7.34□□□□□ -1.23
SAMM50-204ENST00000493161 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
SAMM50-204ENST00000493161 NPC2P61916 151 aa7.33□□□□□ -1.24
SAMM50-204ENST00000493161 COMMD7Q86VX2 200 aa7.33□□□□□ -1.24
SAMM50-204ENST00000493161 NDUFC2O95298 119 aa7.32□□□□□ -1.24
SAMM50-204ENST00000493161 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
SAMM50-204ENST00000493161 J3QQQ9 107 aa7.31□□□□□ -1.24
SAMM50-204ENST00000493161 SPRR1BP22528 89 aa7.31□□□□□ -1.24
SAMM50-204ENST00000493161 MIEN1Q9BRT3 115 aa7.31□□□□□ -1.24
SAMM50-204ENST00000493161 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
SAMM50-204ENST00000493161 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
SAMM50-204ENST00000493161 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
SAMM50-204ENST00000493161 H7C2G1 150 aa7.28□□□□□ -1.24
SAMM50-204ENST00000493161 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
SAMM50-204ENST00000493161 PMCHL2Q9BQD1 86 aa7.27□□□□□ -1.25
SAMM50-204ENST00000493161 HSBP1O75506 76 aa7.26□□□□□ -1.25
SAMM50-204ENST00000493161 LGALS3P17931 250 aaKnown RBP7.26□□□□□ -1.25
SAMM50-204ENST00000493161 YPEL4Q96NS1 127 aa7.26□□□□□ -1.25
SAMM50-204ENST00000493161 LAMTOR3Q9UHA4 124 aa7.26□□□□□ -1.25
SAMM50-204ENST00000493161 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
SAMM50-204ENST00000493161 NMUP48645 174 aa7.25□□□□□ -1.25
SAMM50-204ENST00000493161 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
SAMM50-204ENST00000493161 Q1RN00 199 aa7.25□□□□□ -1.25
SAMM50-204ENST00000493161 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
SAMM50-204ENST00000493161 A0A0G2JQZ4 141 aa7.24□□□□□ -1.25
SAMM50-204ENST00000493161 PLNP26678 52 aa7.24□□□□□ -1.25
SAMM50-204ENST00000493161 HINT1P49773 126 aaPredicted RBP7.24□□□□□ -1.25
SAMM50-204ENST00000493161 LINC00310P59036 64 aa7.24□□□□□ -1.25
SAMM50-204ENST00000493161 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
SAMM50-204ENST00000493161 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
SAMM50-204ENST00000493161 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
SAMM50-204ENST00000493161 DPM2O94777 84 aa7.23□□□□□ -1.25
SAMM50-204ENST00000493161 APOC3P02656 99 aa7.23□□□□□ -1.25
SAMM50-204ENST00000493161 CD164Q04900 197 aa7.23□□□□□ -1.25
SAMM50-204ENST00000493161 DEFB105AQ8NG35 78 aa7.23□□□□□ -1.25
SAMM50-204ENST00000493161 DHRS4-AS1Q9P1J3 65 aa7.23□□□□□ -1.25
SAMM50-204ENST00000493161 LEPROTL1O95214 131 aa7.22□□□□□ -1.25
SAMM50-204ENST00000493161 HERVK_113P61574 105 aa7.22□□□□□ -1.25
SAMM50-204ENST00000493161 OR13C6PQ8NH95 151 aa7.22□□□□□ -1.25
SAMM50-204ENST00000493161 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
SAMM50-204ENST00000493161 SERF1AO75920 110 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 GHRHP01286 108 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 IGKCP01834 107 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 FABP4P15090 132 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 TAL2Q16559 108 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 Q5XG85 94 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 SMIM29Q86T20 159 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 LINC00308Q8TCZ7 52 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 LITAFQ99732 161 aa7.2□□□□□ -1.26
SAMM50-204ENST00000493161 COX7BP24311 80 aa7.19□□□□□ -1.26
SAMM50-204ENST00000493161 ELOF1P60002 83 aaKnown RBP7.19□□□□□ -1.26
SAMM50-204ENST00000493161 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
SAMM50-204ENST00000493161 SNAPINO95295 136 aa7.18□□□□□ -1.26
SAMM50-204ENST00000493161 C6orf99Q4VX62 202 aa7.18□□□□□ -1.26
SAMM50-204ENST00000493161 SPANXCQ9NY87 97 aa7.18□□□□□ -1.26
SAMM50-204ENST00000493161 CBY1Q9Y3M2 126 aa7.18□□□□□ -1.26
SAMM50-204ENST00000493161 USH2AO75445 5202 aa7.16□□□□□ -1.26
SAMM50-204ENST00000493161 TEX49A0A1B0GTD5 131 aa7.16□□□□□ -1.26
SAMM50-204ENST00000493161 E9PLD3 99 aa7.16□□□□□ -1.26
SAMM50-204ENST00000493161 TRGC2P03986 189 aa7.16□□□□□ -1.26
SAMM50-204ENST00000493161 AKR1D1P51857 326 aa7.16□□□□□ -1.26
SAMM50-204ENST00000493161 SVBPQ8N300 66 aa7.16□□□□□ -1.26
SAMM50-204ENST00000493161 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
SAMM50-204ENST00000493161 HSPB8Q9UJY1 196 aa7.15□□□□□ -1.26
SAMM50-204ENST00000493161 Q6Q795 121 aa7.14□□□□□ -1.27
SAMM50-204ENST00000493161 NDUFA5Q16718 116 aa7.12□□□□□ -1.27
SAMM50-204ENST00000493161 IGLV5-48A0A075B6I7 105 aa7.11□□□□□ -1.27
SAMM50-204ENST00000493161 TIMM17BO60830 172 aa7.11□□□□□ -1.27
SAMM50-204ENST00000493161 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
SAMM50-204ENST00000493161 TTTY13Q9BZ97 58 aa7.11□□□□□ -1.27
SAMM50-204ENST00000493161 TRBV7-6A0A0J9YX20 115 aa7.07□□□□□ -1.28
SAMM50-204ENST00000493161 ZNF815PA8K554 130 aa7.07□□□□□ -1.28
SAMM50-204ENST00000493161 LINC00518Q8N0U6 118 aa7.07□□□□□ -1.28
SAMM50-204ENST00000493161 TCL1BO95988 128 aa7.06□□□□□ -1.28
SAMM50-204ENST00000493161 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
SAMM50-204ENST00000493161 SYS1-DBNDD2H3BUS1 97 aa7.04□□□□□ -1.28
SAMM50-204ENST00000493161 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
SAMM50-204ENST00000493161 PCP2Q8IVA1 136 aa7.04□□□□□ -1.28
SAMM50-204ENST00000493161 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
SAMM50-204ENST00000493161 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
SAMM50-204ENST00000493161 CFC1P0CG37 223 aa7.03□□□□□ -1.28
SAMM50-204ENST00000493161 A6NDN8 102 aa7.02□□□□□ -1.29
SAMM50-204ENST00000493161 Q75L30 129 aa7.02□□□□□ -1.29
SAMM50-204ENST00000493161 LINC01545Q5VT33 79 aa7.01□□□□□ -1.29
SAMM50-204ENST00000493161 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
SAMM50-204ENST00000493161 COLCA2A8K830 154 aa6.98□□□□□ -1.29
SAMM50-204ENST00000493161 SMIM11BQ8TCY0 68 aa6.98□□□□□ -1.29
SAMM50-204ENST00000493161 A4D1N5 150 aa6.97□□□□□ -1.29
SAMM50-204ENST00000493161 MT2AP02795 61 aa6.97□□□□□ -1.29
SAMM50-204ENST00000493161 IGFL1Q6UW32 110 aa6.97□□□□□ -1.29
SAMM50-204ENST00000493161 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
SAMM50-204ENST00000493161 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
SAMM50-204ENST00000493161 C20orf202A1L168 122 aa6.96□□□□□ -1.3
SAMM50-204ENST00000493161 F8WEM9 126 aa6.96□□□□□ -1.3
SAMM50-204ENST00000493161 PET117Q6UWS5 81 aa6.96□□□□□ -1.3
SAMM50-204ENST00000493161 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms