RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 TRAV23DV6A0A075B6W5 121 aa8.38□□□□□ -1.07
CCM2-217ENST00000492883 COX8AP10176 69 aa8.38□□□□□ -1.07
CCM2-217ENST00000492883 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
CCM2-217ENST00000492883 C14orf144Q96I85 54 aa8.37□□□□□ -1.07
CCM2-217ENST00000492883 PPDPFQ9H3Y8 114 aa8.37□□□□□ -1.07
CCM2-217ENST00000492883 KRTAP4-16G5E9R7 235 aaPredicted RBP8.36□□□□□ -1.07
CCM2-217ENST00000492883 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
CCM2-217ENST00000492883 B5MCH6 92 aa8.35□□□□□ -1.07
CCM2-217ENST00000492883 DLEU1O43261 78 aa8.35□□□□□ -1.07
CCM2-217ENST00000492883 ZNF73O43830 326 aaPredicted RBP8.35□□□□□ -1.07
CCM2-217ENST00000492883 HINT1P49773 126 aaPredicted RBP8.35□□□□□ -1.07
CCM2-217ENST00000492883 A6NDN8 102 aa8.34□□□□□ -1.07
CCM2-217ENST00000492883 PYY3Q5JQD4 70 aa8.34□□□□□ -1.07
CCM2-217ENST00000492883 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
CCM2-217ENST00000492883 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
CCM2-217ENST00000492883 CRYGAP11844 174 aa8.33□□□□□ -1.08
CCM2-217ENST00000492883 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
CCM2-217ENST00000492883 FAT3Q8TDW7 4589 aa8.33□□□□□ -1.08
CCM2-217ENST00000492883 HIST1H4GQ99525 98 aa8.33□□□□□ -1.08
CCM2-217ENST00000492883 SLC25A34Q6PIV7 304 aa8.32□□□□□ -1.08
CCM2-217ENST00000492883 Q6ZRX8 168 aa8.32□□□□□ -1.08
CCM2-217ENST00000492883 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
CCM2-217ENST00000492883 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
CCM2-217ENST00000492883 A4D1N5 150 aa8.3□□□□□ -1.08
CCM2-217ENST00000492883 A0A087X002 238 aa8.29□□□□□ -1.08
CCM2-217ENST00000492883 FAM229BQ4G0N7 80 aa8.29□□□□□ -1.08
CCM2-217ENST00000492883 C6orf99Q4VX62 202 aa8.29□□□□□ -1.08
CCM2-217ENST00000492883 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
CCM2-217ENST00000492883 Q9BRP9 147 aa8.29□□□□□ -1.08
CCM2-217ENST00000492883 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
CCM2-217ENST00000492883 HIGD1BQ9P298 99 aa8.28□□□□□ -1.08
CCM2-217ENST00000492883 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
CCM2-217ENST00000492883 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
CCM2-217ENST00000492883 COX7BP24311 80 aa8.27□□□□□ -1.09
CCM2-217ENST00000492883 GAGE2AQ6NT46 116 aa8.26□□□□□ -1.09
CCM2-217ENST00000492883 C2orf91Q6ZV80 131 aa8.25□□□□□ -1.09
CCM2-217ENST00000492883 C12orf57Q99622 126 aa8.25□□□□□ -1.09
CCM2-217ENST00000492883 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
CCM2-217ENST00000492883 ELOF1P60002 83 aaKnown RBP8.24□□□□□ -1.09
CCM2-217ENST00000492883 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
CCM2-217ENST00000492883 SMIM11BQ8TCY0 68 aa8.24□□□□□ -1.09
CCM2-217ENST00000492883 DHRS4-AS1Q9P1J3 65 aa8.24□□□□□ -1.09
CCM2-217ENST00000492883 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
CCM2-217ENST00000492883 TAL2Q16559 108 aa8.22□□□□□ -1.09
CCM2-217ENST00000492883 VAMP3Q15836 100 aa8.21□□□□□ -1.1
CCM2-217ENST00000492883 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
CCM2-217ENST00000492883 CEND1Q8N111 149 aa8.21□□□□□ -1.1
CCM2-217ENST00000492883 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.1
CCM2-217ENST00000492883 ST20-AS1Q8NBB2 130 aa8.21□□□□□ -1.1
CCM2-217ENST00000492883 RAB37Q96AX2 223 aa8.2□□□□□ -1.1
CCM2-217ENST00000492883 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
CCM2-217ENST00000492883 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
CCM2-217ENST00000492883 CFC1P0CG37 223 aa8.19□□□□□ -1.1
CCM2-217ENST00000492883 HERC1Q15751 4861 aa8.19□□□□□ -1.1
CCM2-217ENST00000492883 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
CCM2-217ENST00000492883 A6NJY4 79 aa8.18□□□□□ -1.1
CCM2-217ENST00000492883 TSPAN13O95857 204 aa8.18□□□□□ -1.1
CCM2-217ENST00000492883 TNXBP22105 4242 aa8.18□□□□□ -1.1
CCM2-217ENST00000492883 H7C2G1 150 aa8.17□□□□□ -1.1
CCM2-217ENST00000492883 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
CCM2-217ENST00000492883 IGLV9-49A0A0B4J1Y8 123 aa8.16□□□□□ -1.1
CCM2-217ENST00000492883 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
CCM2-217ENST00000492883 SLC25A20O43772 301 aa8.16□□□□□ -1.1
CCM2-217ENST00000492883 DEFB105AQ8NG35 78 aa8.16□□□□□ -1.1
CCM2-217ENST00000492883 NHP2Q9NX24 153 aaKnown RBP8.16□□□□□ -1.1
CCM2-217ENST00000492883 FXYD2P54710 66 aa8.15□□□□□ -1.1
CCM2-217ENST00000492883 HSD52Q0P140 79 aa8.15□□□□□ -1.1
CCM2-217ENST00000492883 MOBPQ13875 183 aa8.14□□□□□ -1.11
CCM2-217ENST00000492883 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
CCM2-217ENST00000492883 BVES-AS1Q5T3Y7 98 aa8.14□□□□□ -1.11
CCM2-217ENST00000492883 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
CCM2-217ENST00000492883 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CCM2-217ENST00000492883 SMIM6P0DI80 62 aa8.13□□□□□ -1.11
CCM2-217ENST00000492883 Q1RN00 199 aa8.13□□□□□ -1.11
CCM2-217ENST00000492883 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
CCM2-217ENST00000492883 Q8NBF4 154 aa8.13□□□□□ -1.11
CCM2-217ENST00000492883 PRO1933Q9H354 126 aa8.13□□□□□ -1.11
CCM2-217ENST00000492883 TEX49A0A1B0GTD5 131 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 SPRR1BP22528 89 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 C9orf153Q5TBE3 101 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 SPAG11AQ6PDA7 123 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 LAMTOR3Q9UHA4 124 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 PRO1854Q9UHT4 67 aa8.12□□□□□ -1.11
CCM2-217ENST00000492883 LOC105371267A0A1B0GV96 52 aa8.1□□□□□ -1.11
CCM2-217ENST00000492883 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
CCM2-217ENST00000492883 CTAG1AP78358 180 aa8.08□□□□□ -1.12
CCM2-217ENST00000492883 IGLV5-48A0A075B6I7 105 aa8.07□□□□□ -1.12
CCM2-217ENST00000492883 H0YGX0 51 aa8.07□□□□□ -1.12
CCM2-217ENST00000492883 SNCGO76070 127 aa8.07□□□□□ -1.12
CCM2-217ENST00000492883 PRR4Q16378 134 aa8.07□□□□□ -1.12
CCM2-217ENST00000492883 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
CCM2-217ENST00000492883 Q6ZQY7 126 aa8.06□□□□□ -1.12
CCM2-217ENST00000492883 K7ERJ3 54 aa8.05□□□□□ -1.12
CCM2-217ENST00000492883 SPINK1P00995 79 aa8.05□□□□□ -1.12
CCM2-217ENST00000492883 Q8N377 158 aa8.05□□□□□ -1.12
CCM2-217ENST00000492883 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.04□□□□□ -1.12
CCM2-217ENST00000492883 SMIM29Q86T20 159 aa8.04□□□□□ -1.12
CCM2-217ENST00000492883 PSMB2P49721 201 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms