RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 CHD7Q9P2D1 2997 aa3.58□□□□□ -1.84
FN1-224ENST00000492816 C9orf129Q5T035 196 aaKnown RBP3.58□□□□□ -1.84
FN1-224ENST00000492816 Q6ZQT0 140 aa3.57□□□□□ -1.84
FN1-224ENST00000492816 CSAG1Q6PB30 78 aa3.57□□□□□ -1.84
FN1-224ENST00000492816 SMIM29Q86T20 159 aa3.57□□□□□ -1.84
FN1-224ENST00000492816 LINC01600Q96MT4 127 aa3.57□□□□□ -1.84
FN1-224ENST00000492816 IGLV5-48A0A075B6I7 105 aa3.56□□□□□ -1.84
FN1-224ENST00000492816 FAM229BQ4G0N7 80 aa3.56□□□□□ -1.84
FN1-224ENST00000492816 A0A1B0GVX0 72 aa3.56□□□□□ -1.84
FN1-224ENST00000492816 CNBPP62633 177 aaKnown RBP3.56□□□□□ -1.84
FN1-224ENST00000492816 CD164Q04900 197 aa3.55□□□□□ -1.84
FN1-224ENST00000492816 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
FN1-224ENST00000492816 A8MUN3 132 aa3.55□□□□□ -1.84
FN1-224ENST00000492816 K7EQZ3 153 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 LAMA2P24043 3122 aaKnown RBP3.54□□□□□ -1.84
FN1-224ENST00000492816 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
FN1-224ENST00000492816 LINC00612Q8N6U2 182 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 SPTBN4Q9H254 2564 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 FAM168BA1KXE4 195 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 UQCR11O14957 56 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 PSPHP1O15172 72 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
FN1-224ENST00000492816 ANKRD11Q6UB99 2663 aaPredicted RBP3.53□□□□□ -1.84
FN1-224ENST00000492816 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
FN1-224ENST00000492816 KRTAP21-3Q3LHN1 58 aa3.53□□□□□ -1.84
FN1-224ENST00000492816 YPEL4Q96NS1 127 aa3.53□□□□□ -1.84
FN1-224ENST00000492816 LITAFQ99732 161 aa3.53□□□□□ -1.84
FN1-224ENST00000492816 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
FN1-224ENST00000492816 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
FN1-224ENST00000492816 SPRR4Q96PI1 79 aa3.53□□□□□ -1.84
FN1-224ENST00000492816 KCNQ1DNQ9H478 68 aa3.52□□□□□ -1.85
FN1-224ENST00000492816 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
FN1-224ENST00000492816 S4R3F8 94 aa3.52□□□□□ -1.85
FN1-224ENST00000492816 ERC2-IT1O76042 136 aa3.52□□□□□ -1.85
FN1-224ENST00000492816 C1orf195Q5TG92 126 aa3.52□□□□□ -1.85
FN1-224ENST00000492816 ADAMTSL4-AS1Q5T5F5 129 aa3.51□□□□□ -1.85
FN1-224ENST00000492816 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
FN1-224ENST00000492816 CRIP3Q6Q6R5 217 aa3.51□□□□□ -1.85
FN1-224ENST00000492816 PCSK5Q92824 1860 aa3.5□□□□□ -1.85
FN1-224ENST00000492816 A0A0D9SG42 100 aa3.5□□□□□ -1.85
FN1-224ENST00000492816 UNC80Q8N2C7 3258 aa3.5□□□□□ -1.85
FN1-224ENST00000492816 LOC110117498A0A087WWA1 95 aa3.5□□□□□ -1.85
FN1-224ENST00000492816 KRTAP10-3P60369 221 aa3.49□□□□□ -1.85
FN1-224ENST00000492816 IGLV5-45A0A087WSX0 123 aa3.49□□□□□ -1.85
FN1-224ENST00000492816 C15orf56Q8N910 161 aa3.49□□□□□ -1.85
FN1-224ENST00000492816 PRR15Q8IV56 129 aa3.49□□□□□ -1.85
FN1-224ENST00000492816 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
FN1-224ENST00000492816 R4GN34 69 aa3.48□□□□□ -1.85
FN1-224ENST00000492816 SPTBN5Q9NRC6 3674 aaKnown RBP3.48□□□□□ -1.85
FN1-224ENST00000492816 PRR34Q9NV39 138 aa3.48□□□□□ -1.85
FN1-224ENST00000492816 TSPEAR-AS2P59090 65 aa3.47□□□□□ -1.85
FN1-224ENST00000492816 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
FN1-224ENST00000492816 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
FN1-224ENST00000492816 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
FN1-224ENST00000492816 LAMA3Q16787 3333 aa3.46□□□□□ -1.86
FN1-224ENST00000492816 A0A096LNT2 108 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 XIRP2A4UGR9 3374 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 A0A087WVE0 104 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 WIPF1O43516 503 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 A0A1W2PNN7 141 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 H7BZZ5 65 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 Q8N1X5 172 aa3.45□□□□□ -1.86
FN1-224ENST00000492816 PLAC8Q9NZF1 115 aa3.44□□□□□ -1.86
FN1-224ENST00000492816 LCA10Q71F78 164 aa3.44□□□□□ -1.86
FN1-224ENST00000492816 MKI67P46013 3256 aaKnown RBP3.44□□□□□ -1.86
FN1-224ENST00000492816 KRTAP1-3Q8IUG1 177 aa3.43□□□□□ -1.86
FN1-224ENST00000492816 SETD2Q9BYW2 2564 aaPredicted RBP3.43□□□□□ -1.86
FN1-224ENST00000492816 COA5Q86WW8 74 aa3.43□□□□□ -1.86
FN1-224ENST00000492816 FLNBO75369 2602 aaKnown RBP3.43□□□□□ -1.86
FN1-224ENST00000492816 CDH23Q9H251 3354 aa3.42□□□□□ -1.86
FN1-224ENST00000492816 USP9YO00507 2555 aaPredicted RBP3.42□□□□□ -1.86
FN1-224ENST00000492816 USP24Q9UPU5 2620 aa3.42□□□□□ -1.86
FN1-224ENST00000492816 KRTAP1-1Q07627 177 aa3.42□□□□□ -1.86
FN1-224ENST00000492816 EPG5Q9HCE0 2579 aa3.41□□□□□ -1.86
FN1-224ENST00000492816 SZT2Q5T011 3432 aa3.41□□□□□ -1.86
FN1-224ENST00000492816 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
FN1-224ENST00000492816 CYP4F30PQ9H0H9 118 aa3.41□□□□□ -1.86
FN1-224ENST00000492816 CCDC179H3BU77 68 aa3.41□□□□□ -1.86
FN1-224ENST00000492816 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.86
FN1-224ENST00000492816 RANBP2P49792 3224 aaKnown RBP3.4□□□□□ -1.87
FN1-224ENST00000492816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.39□□□□□ -1.87
FN1-224ENST00000492816 KLK9Q2XQG4 91 aa3.39□□□□□ -1.87
FN1-224ENST00000492816 MGAM2Q2M2H8 2515 aa3.39□□□□□ -1.87
FN1-224ENST00000492816 LINC01546A6NGU7 62 aa3.38□□□□□ -1.87
FN1-224ENST00000492816 CFAP54Q96N23 3096 aa3.38□□□□□ -1.87
FN1-224ENST00000492816 SPENQ96T58 3664 aaKnown RBP3.38□□□□□ -1.87
FN1-224ENST00000492816 DMAC1Q96GE9 116 aa3.38□□□□□ -1.87
FN1-224ENST00000492816 TNRC18O15417 2968 aaPredicted RBP3.38□□□□□ -1.87
FN1-224ENST00000492816 Q8N377 158 aa3.37□□□□□ -1.87
FN1-224ENST00000492816 PRUNE2Q8WUY3 3088 aa3.37□□□□□ -1.87
FN1-224ENST00000492816 H1FX-AS1Q4G0G2 97 aa3.36□□□□□ -1.87
FN1-224ENST00000492816 Q1T7F1 81 aa3.36□□□□□ -1.87
FN1-224ENST00000492816 CR1P17927 2039 aa3.36□□□□□ -1.87
FN1-224ENST00000492816 A0A1B0GU33 70 aa3.36□□□□□ -1.87
FN1-224ENST00000492816 USP34Q70CQ2 3546 aa3.36□□□□□ -1.87
FN1-224ENST00000492816 H3BS24 57 aa3.36□□□□□ -1.87
FN1-224ENST00000492816 M0QZ58 72 aa3.35□□□□□ -1.87
FN1-224ENST00000492816 HELZ2Q9BYK8 2649 aaKnown RBP3.35□□□□□ -1.87
FN1-224ENST00000492816 EYSQ5T1H1 3165 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms