RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
HMGN1-220ENST00000492280 DSCR8Q96T75 97 aa8.09□□□□□ -1.12
HMGN1-220ENST00000492280 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.12
HMGN1-220ENST00000492280 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-220ENST00000492280 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
HMGN1-220ENST00000492280 HAMPP81172 84 aa8.08□□□□□ -1.12
HMGN1-220ENST00000492280 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
HMGN1-220ENST00000492280 KRTAP7-1Q8IUC3 87 aa8.07□□□□□ -1.12
HMGN1-220ENST00000492280 MDFIQ99750 246 aa8.07□□□□□ -1.12
HMGN1-220ENST00000492280 UBL5Q9BZL1 73 aa8.07□□□□□ -1.12
HMGN1-220ENST00000492280 PRKDCP78527 4128 aaKnown RBP8.07□□□□□ -1.12
HMGN1-220ENST00000492280 STARD9Q9P2P6 4700 aa8.06□□□□□ -1.12
HMGN1-220ENST00000492280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-220ENST00000492280 Q6ZVQ6 151 aa8.04□□□□□ -1.12
HMGN1-220ENST00000492280 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
HMGN1-220ENST00000492280 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
HMGN1-220ENST00000492280 IGKV2-24A0A0C4DH68 120 aa8.03□□□□□ -1.12
HMGN1-220ENST00000492280 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-220ENST00000492280 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
HMGN1-220ENST00000492280 C3orf84H3BNL1 204 aa8.02□□□□□ -1.13
HMGN1-220ENST00000492280 ATOX1O00244 68 aa8.02□□□□□ -1.13
HMGN1-220ENST00000492280 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-220ENST00000492280 TRBV7-4A0A0J9YYF1 115 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 COX7CP15954 63 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 Q8N9L7 120 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 Q9BRP9 147 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 UQCRQO14949 82 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 TGP01266 2768 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 DNHD1Q96M86 4753 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
HMGN1-220ENST00000492280 GHRHP01286 108 aa8□□□□□ -1.13
HMGN1-220ENST00000492280 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
HMGN1-220ENST00000492280 ERC2-IT1O76042 136 aa8□□□□□ -1.13
HMGN1-220ENST00000492280 A0A0G2JQZ4 141 aa7.99□□□□□ -1.13
HMGN1-220ENST00000492280 A0A1W2PNN7 141 aa7.99□□□□□ -1.13
HMGN1-220ENST00000492280 Q8N377 158 aa7.99□□□□□ -1.13
HMGN1-220ENST00000492280 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
HMGN1-220ENST00000492280 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
HMGN1-220ENST00000492280 IGLV1-50A0A075B6I6 118 aa7.97□□□□□ -1.13
HMGN1-220ENST00000492280 A0A096LNI7 61 aa7.97□□□□□ -1.13
HMGN1-220ENST00000492280 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
HMGN1-220ENST00000492280 PSCAO43653 123 aa7.97□□□□□ -1.13
HMGN1-220ENST00000492280 CHTF8P0CG12 524 aa7.97□□□□□ -1.13
HMGN1-220ENST00000492280 Q6ZRX8 168 aa7.96□□□□□ -1.13
HMGN1-220ENST00000492280 KMT2AQ03164 3969 aa7.96□□□□□ -1.14
HMGN1-220ENST00000492280 DYNC2H1Q8NCM8 4307 aaKnown RBP7.96□□□□□ -1.14
HMGN1-220ENST00000492280 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.14
HMGN1-220ENST00000492280 MRPL55Q7Z7F7 128 aaKnown RBP7.96□□□□□ -1.14
HMGN1-220ENST00000492280 TLX1NBP0CAT3 122 aa7.95□□□□□ -1.14
HMGN1-220ENST00000492280 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
HMGN1-220ENST00000492280 UBE2BP63146 152 aa7.95□□□□□ -1.14
HMGN1-220ENST00000492280 ATP5EP2Q5VTU8 51 aa7.95□□□□□ -1.14
HMGN1-220ENST00000492280 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
HMGN1-220ENST00000492280 FUSP35637 526 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGN1-220ENST00000492280 PRLHP81277 87 aa7.94□□□□□ -1.14
HMGN1-220ENST00000492280 RMI2Q96E14 147 aa7.94□□□□□ -1.14
HMGN1-220ENST00000492280 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
HMGN1-220ENST00000492280 BPY2O14599 106 aa7.93□□□□□ -1.14
HMGN1-220ENST00000492280 F8WDY8 70 aa7.91□□□□□ -1.14
HMGN1-220ENST00000492280 PDE6GP18545 87 aa7.91□□□□□ -1.14
HMGN1-220ENST00000492280 CRYGAP11844 174 aa7.91□□□□□ -1.14
HMGN1-220ENST00000492280 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
HMGN1-220ENST00000492280 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
HMGN1-220ENST00000492280 PRYO14603 147 aa7.9□□□□□ -1.14
HMGN1-220ENST00000492280 APLNQ9ULZ1 77 aa7.9□□□□□ -1.14
HMGN1-220ENST00000492280 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
HMGN1-220ENST00000492280 SPRR1AP35321 89 aa7.89□□□□□ -1.15
HMGN1-220ENST00000492280 HIGD2AQ9BW72 106 aa7.89□□□□□ -1.15
HMGN1-220ENST00000492280 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
HMGN1-220ENST00000492280 FRAS1Q86XX4 4008 aa7.89□□□□□ -1.15
HMGN1-220ENST00000492280 A0A1W2PNM2 257 aa7.88□□□□□ -1.15
HMGN1-220ENST00000492280 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
HMGN1-220ENST00000492280 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
HMGN1-220ENST00000492280 H3BQ85 93 aa7.88□□□□□ -1.15
HMGN1-220ENST00000492280 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
HMGN1-220ENST00000492280 DHRS4-AS1Q9P1J3 65 aa7.88□□□□□ -1.15
HMGN1-220ENST00000492280 SNURFQ9Y675 71 aa7.87□□□□□ -1.15
HMGN1-220ENST00000492280 NREPQ16612 68 aa7.87□□□□□ -1.15
HMGN1-220ENST00000492280 C1orf137Q5JT78 98 aa7.87□□□□□ -1.15
HMGN1-220ENST00000492280 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
HMGN1-220ENST00000492280 HECTD4Q9Y4D8 3996 aa7.86□□□□□ -1.15
HMGN1-220ENST00000492280 PANO1I0J062 215 aa7.86□□□□□ -1.15
HMGN1-220ENST00000492280 CXCL6P80162 114 aa7.86□□□□□ -1.15
HMGN1-220ENST00000492280 B9D2Q9BPU9 175 aa7.86□□□□□ -1.15
HMGN1-220ENST00000492280 IGLV5-48A0A075B6I7 105 aa7.85□□□□□ -1.15
HMGN1-220ENST00000492280 C16orf90A8MZG2 172 aa7.84□□□□□ -1.15
HMGN1-220ENST00000492280 TNP2Q05952 138 aa7.84□□□□□ -1.15
HMGN1-220ENST00000492280 DEFB116Q30KQ4 102 aa7.84□□□□□ -1.15
HMGN1-220ENST00000492280 IGKV4-1P06312 121 aa7.83□□□□□ -1.16
HMGN1-220ENST00000492280 SMIM29Q86T20 159 aa7.82□□□□□ -1.16
HMGN1-220ENST00000492280 CNBPP62633 177 aaKnown RBP7.81□□□□□ -1.16
HMGN1-220ENST00000492280 LINC00476Q8WZB0 136 aa7.81□□□□□ -1.16
HMGN1-220ENST00000492280 Q8NBF4 154 aa7.8□□□□□ -1.16
HMGN1-220ENST00000492280 NBDYA0A0U1RRE5 68 aa7.79□□□□□ -1.16
HMGN1-220ENST00000492280 OXTP01178 125 aa7.79□□□□□ -1.16
HMGN1-220ENST00000492280 DPH3Q96FX2 82 aa7.79□□□□□ -1.16
HMGN1-220ENST00000492280 FBN3Q75N90 2809 aa7.79□□□□□ -1.16
HMGN1-220ENST00000492280 TRAV7A0A075B6U4 112 aa7.78□□□□□ -1.16
HMGN1-220ENST00000492280 LRCOL1A6NCL2 159 aa7.78□□□□□ -1.16
HMGN1-220ENST00000492280 DNAH8Q96JB1 4490 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms