RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 E9PLD3 99 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 TSPAN13O95857 204 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 PRR4Q16378 134 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 ARL17AQ8IVW1 177 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
USP39-217ENST00000491659 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
USP39-217ENST00000491659 HINT1P49773 126 aaPredicted RBP8.86□□□□□ -0.99
USP39-217ENST00000491659 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
USP39-217ENST00000491659 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
USP39-217ENST00000491659 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
USP39-217ENST00000491659 TRBV10-2A0A0K0K1G8 114 aa8.85□□□□□ -0.99
USP39-217ENST00000491659 SPRR1AP35321 89 aa8.85□□□□□ -0.99
USP39-217ENST00000491659 PCP2Q8IVA1 136 aa8.85□□□□□ -0.99
USP39-217ENST00000491659 SPANXB1Q9NS25 103 aaPredicted RBP8.85□□□□□ -0.99
USP39-217ENST00000491659 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
USP39-217ENST00000491659 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
USP39-217ENST00000491659 HSD52Q0P140 79 aa8.83□□□□□ -1
USP39-217ENST00000491659 SPRR4Q96PI1 79 aa8.83□□□□□ -1
USP39-217ENST00000491659 NDUFC2O95298 119 aa8.82□□□□□ -1
USP39-217ENST00000491659 NPC2P61916 151 aa8.82□□□□□ -1
USP39-217ENST00000491659 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
USP39-217ENST00000491659 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
USP39-217ENST00000491659 KRTAP4-16G5E9R7 235 aaPredicted RBP8.81□□□□□ -1
USP39-217ENST00000491659 TAL2Q16559 108 aa8.81□□□□□ -1
USP39-217ENST00000491659 BVES-AS1Q5T3Y7 98 aa8.81□□□□□ -1
USP39-217ENST00000491659 A6NDN8 102 aa8.8□□□□□ -1
USP39-217ENST00000491659 A0A1B0GV90 55 aa8.79□□□□□ -1
USP39-217ENST00000491659 ZNF815PA8K554 130 aa8.79□□□□□ -1
USP39-217ENST00000491659 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
USP39-217ENST00000491659 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
USP39-217ENST00000491659 C3orf22Q8N5N4 141 aa8.79□□□□□ -1
USP39-217ENST00000491659 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
USP39-217ENST00000491659 LPAP08519 4548 aa8.79□□□□□ -1
USP39-217ENST00000491659 B5MCH6 92 aa8.78□□□□□ -1
USP39-217ENST00000491659 SCGB1D4Q6XE38 83 aa8.78□□□□□ -1
USP39-217ENST00000491659 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
USP39-217ENST00000491659 TIMM17BO60830 172 aa8.77□□□□□ -1.01
USP39-217ENST00000491659 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
USP39-217ENST00000491659 TTTY13Q9BZ97 58 aa8.77□□□□□ -1.01
USP39-217ENST00000491659 Q6ZRX8 168 aa8.76□□□□□ -1.01
USP39-217ENST00000491659 HIST1H4GQ99525 98 aa8.76□□□□□ -1.01
USP39-217ENST00000491659 CBY1Q9Y3M2 126 aa8.76□□□□□ -1.01
USP39-217ENST00000491659 EIF4EBP3O60516 100 aaPredicted RBP8.75□□□□□ -1.01
USP39-217ENST00000491659 LINC00308Q8TCZ7 52 aa8.75□□□□□ -1.01
USP39-217ENST00000491659 LITAFQ99732 161 aa8.75□□□□□ -1.01
USP39-217ENST00000491659 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
USP39-217ENST00000491659 SPANXCQ9NY87 97 aa8.75□□□□□ -1.01
USP39-217ENST00000491659 CEND1Q8N111 149 aa8.74□□□□□ -1.01
USP39-217ENST00000491659 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
USP39-217ENST00000491659 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
USP39-217ENST00000491659 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
USP39-217ENST00000491659 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
USP39-217ENST00000491659 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
USP39-217ENST00000491659 Q9BRP9 147 aa8.72□□□□□ -1.01
USP39-217ENST00000491659 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
USP39-217ENST00000491659 A6NJY4 79 aa8.71□□□□□ -1.02
USP39-217ENST00000491659 ERC2-IT1O76042 136 aa8.71□□□□□ -1.02
USP39-217ENST00000491659 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.02
USP39-217ENST00000491659 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
USP39-217ENST00000491659 Q8NBF4 154 aa8.7□□□□□ -1.02
USP39-217ENST00000491659 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
USP39-217ENST00000491659 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
USP39-217ENST00000491659 COPS9Q8WXC6 57 aa8.68□□□□□ -1.02
USP39-217ENST00000491659 IGLV9-49A0A0B4J1Y8 123 aa8.67□□□□□ -1.02
USP39-217ENST00000491659 MOBPQ13875 183 aa8.67□□□□□ -1.02
USP39-217ENST00000491659 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
USP39-217ENST00000491659 FXYD2P54710 66 aa8.66□□□□□ -1.02
USP39-217ENST00000491659 VAMP3Q15836 100 aa8.66□□□□□ -1.02
USP39-217ENST00000491659 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
USP39-217ENST00000491659 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
USP39-217ENST00000491659 Q6ZVH6 145 aa8.65□□□□□ -1.02
USP39-217ENST00000491659 NHP2Q9NX24 153 aaKnown RBP8.65□□□□□ -1.02
USP39-217ENST00000491659 SPINK1P00995 79 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 IFITM1P13164 125 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 SSBP3-AS1Q7Z2R9 100 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 RAB37Q96AX2 223 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 DHRS4-AS1Q9P1J3 65 aa8.63□□□□□ -1.03
USP39-217ENST00000491659 COX7BP24311 80 aa8.61□□□□□ -1.03
USP39-217ENST00000491659 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
USP39-217ENST00000491659 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
USP39-217ENST00000491659 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
USP39-217ENST00000491659 A0A1B0GWB2 263 aa8.6□□□□□ -1.03
USP39-217ENST00000491659 H3BUT2 72 aa8.6□□□□□ -1.03
USP39-217ENST00000491659 ELOF1P60002 83 aaKnown RBP8.6□□□□□ -1.03
USP39-217ENST00000491659 UBE2V1Q13404 147 aa8.6□□□□□ -1.03
USP39-217ENST00000491659 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
USP39-217ENST00000491659 GTF2H5Q6ZYL4 71 aa8.6□□□□□ -1.03
USP39-217ENST00000491659 FABP2P12104 132 aa8.59□□□□□ -1.03
USP39-217ENST00000491659 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
USP39-217ENST00000491659 MUSTN1Q8IVN3 82 aa8.59□□□□□ -1.03
USP39-217ENST00000491659 TRBV7-6A0A0J9YX20 115 aa8.57□□□□□ -1.04
USP39-217ENST00000491659 A0A1W2PPM0 123 aa8.57□□□□□ -1.04
USP39-217ENST00000491659 K7ERJ3 54 aa8.57□□□□□ -1.04
USP39-217ENST00000491659 SPRR1BP22528 89 aa8.56□□□□□ -1.04
USP39-217ENST00000491659 A4D1N5 150 aa8.55□□□□□ -1.04
USP39-217ENST00000491659 LYRM7Q5U5X0 104 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms