RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	URB1-AS1	Q96HZ7	61 aa		10.07	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	SEC11C	Q9BY50	192 aa		10.07	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	C1orf195	Q5TG92	126 aa		10.06	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334		Q5XG85	94 aa		10.06	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	MIEN1	Q9BRT3	115 aa		10.06	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	PRO1933	Q9H354	126 aa		10.05	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334		H7C2G1	150 aa		10.04	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	NDUFC2	O95298	119 aa		10.04	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	TRAV12-1	A0A0B4J245	112 aa		10.03	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	C18orf32	Q8TCD1	76 aa		10.03	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	CBY1	Q9Y3M2	126 aa		10.03	□□□□□ -0.8
CDK5RAP2-218	ENST00000491334	COMMD7	Q86VX2	200 aa		10.02	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	KRTAP19-1	Q8IUB9	90 aa		10.02	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	IFITM2	Q01629	132 aa		10	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	DHRS4-AS1	Q9P1J3	65 aa		10	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	AKR1D1	P51857	326 aa		9.98	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	IFI27L1	Q96BM0	104 aa		9.98	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	TAL2	Q16559	108 aa		9.97	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334	SMIM29	Q86T20	159 aa		9.97	□□□□□ -0.81
CDK5RAP2-218	ENST00000491334		Q1RN00	199 aa		9.96	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	ATP11AUN	Q6ZP68	121 aa		9.96	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	RPS10P5	Q9NQ39	176 aa		9.94	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	TRAPPC1	Q9Y5R8	145 aa		9.94	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	SYNE2	Q8WXH0	6885 aa	Known RBP	9.94	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	C20orf202	A1L168	122 aa		9.93	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	LEPROT	O15243	131 aa		9.93	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	DEFB105A	Q8NG35	78 aa		9.93	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	MACF1	Q9UPN3	7388 aa	Known RBP	9.92	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	TSPEAR-AS2	P59090	65 aa		9.92	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	RHEB	Q15382	184 aa		9.92	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	TEX49	A0A1B0GTD5	131 aa		9.91	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	TCL1B	O95988	128 aa		9.9	□□□□□ -0.82
CDK5RAP2-218	ENST00000491334	TMEM218	A2RU14	115 aa		9.89	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	NMU	P48645	174 aa		9.89	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	C10orf91	Q5T1B1	145 aa		9.89	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334		J3QQQ9	107 aa		9.88	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	LCE2B	O14633	110 aa		9.88	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	NPC2	P61916	151 aa		9.88	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	SOSTDC1	Q6X4U4	206 aa		9.88	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	OR13C6P	Q8NH95	151 aa		9.88	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	EIF4EBP3	O60516	100 aa	Predicted RBP	9.86	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	CHCHD1	Q96BP2	118 aa	Known RBP	9.86	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	LINC00846	Q9NV44	126 aa		9.86	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	COX7B	P24311	80 aa		9.85	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	UQCC3	Q6UW78	93 aa		9.85	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334		Q75L30	129 aa		9.85	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334		A0A0G2JQZ4	141 aa		9.84	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	MT2A	P02795	61 aa		9.84	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	LGALS3	P17931	250 aa	Known RBP	9.84	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	ELOF1	P60002	83 aa	Known RBP	9.84	□□□□□ -0.83
CDK5RAP2-218	ENST00000491334	ADAMTSL4-AS1	Q5T5F5	129 aa		9.83	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334		H0Y8G0	127 aa		9.82	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	HERVK_113	P61574	105 aa		9.82	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	PCP2	Q8IVA1	136 aa		9.82	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	TRBV20-1	A0A075B6N2	111 aa		9.81	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	PLN	P26678	52 aa		9.8	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	SPANXC	Q9NY87	97 aa		9.8	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	OBSCN-AS1	Q96MR7	158 aa		9.79	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	SPANXD	Q9BXN6	97 aa		9.79	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	C6orf99	Q4VX62	202 aa		9.78	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	CLLU1	Q5K131	121 aa		9.78	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334	KRTAP9-3	Q9BYQ3	159 aa		9.78	□□□□□ -0.84
CDK5RAP2-218	ENST00000491334		A0A0J9YXY3	114 aa		9.77	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	KRTAP10-10	P60014	251 aa		9.76	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	IGLV5-48	A0A075B6I7	105 aa		9.75	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	MT1F	P04733	61 aa		9.75	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	HSBP1	O75506	76 aa		9.74	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	LINC00308	Q8TCZ7	52 aa		9.74	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	TRBV7-6	A0A0J9YX20	115 aa		9.73	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	DPM2	O94777	84 aa		9.73	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	LINC00518	Q8N0U6	118 aa		9.72	□□□□□ -0.85
CDK5RAP2-218	ENST00000491334	LEPROTL1	O95214	131 aa		9.69	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334	IGKC	P01834	107 aa		9.69	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334		Q96NJ1	140 aa		9.69	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334		A0A1B0GWB2	263 aa		9.68	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334	KRTAP6-3	Q3LI67	103 aa		9.67	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334	KRTAP19-6	Q3LI70	58 aa		9.66	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334	LITAF	Q99732	161 aa		9.66	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334	PMCHL2	Q9BQD1	86 aa		9.66	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334		F8WEM9	126 aa		9.65	□□□□□ -0.86
CDK5RAP2-218	ENST00000491334	FAM236D	A0A1B0GTK5	79 aa		9.64	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	TIMM17B	O60830	172 aa		9.64	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	FAM236C	P0DP71	79 aa		9.64	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334		E9PLD3	99 aa		9.63	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	TRBV7-7	A0A0K0K1E9	115 aa		9.62	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	HSPB8	Q9UJY1	196 aa		9.62	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334		A4D1N5	150 aa		9.61	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	C20orf166-AS1	Q96NR2	134 aa		9.61	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	KRTAP3-3	Q9BYR6	98 aa		9.61	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	KRTAP3-2	Q9BYR7	98 aa		9.61	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	NHP2	Q9NX24	153 aa	Known RBP	9.61	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334		Q6JHZ5	121 aa		9.6	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334	IGFL1	Q6UW32	110 aa		9.6	□□□□□ -0.87
CDK5RAP2-218	ENST00000491334		A8MUU9	505 aa		9.58	□□□□□ -0.88
CDK5RAP2-218	ENST00000491334	FABP4	P15090	132 aa		9.58	□□□□□ -0.88
CDK5RAP2-218	ENST00000491334	SERF1A	O75920	110 aa		9.56	□□□□□ -0.88
CDK5RAP2-218	ENST00000491334	CLEC2B	Q92478	149 aa		9.56	□□□□□ -0.88
CDK5RAP2-218	ENST00000491334	LST1	O00453	97 aa		9.55	□□□□□ -0.88
CDK5RAP2-218	ENST00000491334		A6NDN8	102 aa		9.54	□□□□□ -0.88
CDK5RAP2-218	ENST00000491334	RBM12B-AS1	Q9P1G2	102 aa		9.54	□□□□□ -0.88

Retrieved 100 of 20,778 RNA–protein pairs in 125 ms