RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 M0R378 163 aa8.88□□□□□ -0.99
SMPD4-219ENST00000491128 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
SMPD4-219ENST00000491128 TRAV23DV6A0A075B6W5 121 aa8.88□□□□□ -0.99
SMPD4-219ENST00000491128 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
SMPD4-219ENST00000491128 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
SMPD4-219ENST00000491128 FAT2Q9NYQ8 4349 aa8.88□□□□□ -0.99
SMPD4-219ENST00000491128 CCDC179H3BU77 68 aa8.87□□□□□ -0.99
SMPD4-219ENST00000491128 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
SMPD4-219ENST00000491128 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
SMPD4-219ENST00000491128 RTL8CO15255 209 aa8.87□□□□□ -0.99
SMPD4-219ENST00000491128 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
SMPD4-219ENST00000491128 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
SMPD4-219ENST00000491128 SNCGO76070 127 aa8.86□□□□□ -0.99
SMPD4-219ENST00000491128 LINC00167Q96N53 147 aa8.86□□□□□ -0.99
SMPD4-219ENST00000491128 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
SMPD4-219ENST00000491128 ZNF73O43830 326 aaPredicted RBP8.85□□□□□ -0.99
SMPD4-219ENST00000491128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SMPD4-219ENST00000491128 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
SMPD4-219ENST00000491128 TEX49A0A1B0GTD5 131 aa8.84□□□□□ -0.99
SMPD4-219ENST00000491128 SMIM20Q8N5G0 67 aa8.84□□□□□ -0.99
SMPD4-219ENST00000491128 LINC01600Q96MT4 127 aa8.84□□□□□ -0.99
SMPD4-219ENST00000491128 Q6Q795 121 aa8.83□□□□□ -1
SMPD4-219ENST00000491128 KRTAP10-2P60368 255 aa8.83□□□□□ -1
SMPD4-219ENST00000491128 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
SMPD4-219ENST00000491128 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
SMPD4-219ENST00000491128 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
SMPD4-219ENST00000491128 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
SMPD4-219ENST00000491128 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
SMPD4-219ENST00000491128 H0YGX0 51 aa8.81□□□□□ -1
SMPD4-219ENST00000491128 DIRC1Q969H9 104 aa8.81□□□□□ -1
SMPD4-219ENST00000491128 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
SMPD4-219ENST00000491128 DNAL4O96015 105 aa8.8□□□□□ -1
SMPD4-219ENST00000491128 PKD1P98161 4303 aa8.8□□□□□ -1
SMPD4-219ENST00000491128 BAALC-AS2P0C853 105 aa8.79□□□□□ -1
SMPD4-219ENST00000491128 PLA2G2DQ9UNK4 145 aa8.79□□□□□ -1
SMPD4-219ENST00000491128 HAMPP81172 84 aa8.79□□□□□ -1
SMPD4-219ENST00000491128 PKHD1P08F94 4074 aa8.79□□□□□ -1
SMPD4-219ENST00000491128 TRACP01848 142 aa8.78□□□□□ -1
SMPD4-219ENST00000491128 LINC00575Q6W349 94 aa8.78□□□□□ -1
SMPD4-219ENST00000491128 COX7BP24311 80 aa8.77□□□□□ -1
SMPD4-219ENST00000491128 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1
SMPD4-219ENST00000491128 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
SMPD4-219ENST00000491128 DNAH8Q96JB1 4490 aa8.77□□□□□ -1.01
SMPD4-219ENST00000491128 RYR2Q92736 4967 aa8.76□□□□□ -1.01
SMPD4-219ENST00000491128 hADV29S1A0JD25 119 aa8.76□□□□□ -1.01
SMPD4-219ENST00000491128 ELOF1P60002 83 aaKnown RBP8.75□□□□□ -1.01
SMPD4-219ENST00000491128 UBE2BP63146 152 aa8.75□□□□□ -1.01
SMPD4-219ENST00000491128 Q6ZQY7 126 aa8.74□□□□□ -1.01
SMPD4-219ENST00000491128 SPACA4Q8TDM5 124 aa8.74□□□□□ -1.01
SMPD4-219ENST00000491128 LCE6AA0A183 80 aa8.73□□□□□ -1.01
SMPD4-219ENST00000491128 FAM30AQ9NZY2 134 aa8.73□□□□□ -1.01
SMPD4-219ENST00000491128 PRLHP81277 87 aa8.73□□□□□ -1.01
SMPD4-219ENST00000491128 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
SMPD4-219ENST00000491128 H3BT86 120 aa8.72□□□□□ -1.01
SMPD4-219ENST00000491128 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
SMPD4-219ENST00000491128 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
SMPD4-219ENST00000491128 Q9BRP9 147 aa8.72□□□□□ -1.01
SMPD4-219ENST00000491128 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.01
SMPD4-219ENST00000491128 DEFB105AQ8NG35 78 aa8.71□□□□□ -1.01
SMPD4-219ENST00000491128 ORMDL1Q9P0S3 153 aa8.71□□□□□ -1.01
SMPD4-219ENST00000491128 FAM240AA0A1B0GVK7 77 aa8.7□□□□□ -1.02
SMPD4-219ENST00000491128 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
SMPD4-219ENST00000491128 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
SMPD4-219ENST00000491128 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
SMPD4-219ENST00000491128 PRYO14603 147 aa8.69□□□□□ -1.02
SMPD4-219ENST00000491128 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
SMPD4-219ENST00000491128 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
SMPD4-219ENST00000491128 RYR3Q15413 4870 aa8.69□□□□□ -1.02
SMPD4-219ENST00000491128 SPRR1AP35321 89 aa8.68□□□□□ -1.02
SMPD4-219ENST00000491128 Q6ZRX8 168 aa8.68□□□□□ -1.02
SMPD4-219ENST00000491128 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
SMPD4-219ENST00000491128 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
SMPD4-219ENST00000491128 C3orf22Q8N5N4 141 aa8.66□□□□□ -1.02
SMPD4-219ENST00000491128 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
SMPD4-219ENST00000491128 LRP1BQ9NZR2 4599 aa8.66□□□□□ -1.02
SMPD4-219ENST00000491128 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
SMPD4-219ENST00000491128 A0A1B0GX51 115 aa8.65□□□□□ -1.02
SMPD4-219ENST00000491128 SMCR5Q8TEV8 140 aa8.64□□□□□ -1.03
SMPD4-219ENST00000491128 FAM236AA0A1B0GUQ0 79 aa8.64□□□□□ -1.03
SMPD4-219ENST00000491128 FAM236BA0A1B0GV22 79 aa8.64□□□□□ -1.03
SMPD4-219ENST00000491128 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
SMPD4-219ENST00000491128 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
SMPD4-219ENST00000491128 TMEM256-PLSCR3K7ERE1 68 aa8.63□□□□□ -1.03
SMPD4-219ENST00000491128 CIRBP-AS1Q8TBR5 109 aa8.63□□□□□ -1.03
SMPD4-219ENST00000491128 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
SMPD4-219ENST00000491128 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
SMPD4-219ENST00000491128 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.61□□□□□ -1.03
SMPD4-219ENST00000491128 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
SMPD4-219ENST00000491128 IMUPQ9GZP8 106 aa8.61□□□□□ -1.03
SMPD4-219ENST00000491128 PSORS1C2Q9UIG4 136 aa8.61□□□□□ -1.03
SMPD4-219ENST00000491128 UBE2AP49459 152 aa8.6□□□□□ -1.03
SMPD4-219ENST00000491128 ACYP1P07311 99 aa8.6□□□□□ -1.03
SMPD4-219ENST00000491128 Q8N377 158 aa8.6□□□□□ -1.03
SMPD4-219ENST00000491128 DHRS4-AS1Q9P1J3 65 aa8.6□□□□□ -1.03
SMPD4-219ENST00000491128 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
SMPD4-219ENST00000491128 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
SMPD4-219ENST00000491128 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
SMPD4-219ENST00000491128 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
SMPD4-219ENST00000491128 C9orf153Q5TBE3 101 aa8.58□□□□□ -1.04
SMPD4-219ENST00000491128 INAFM2P0DMQ5 153 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms