RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 RNF213Q63HN8 5207 aa10.12□□□□□ -0.79
SEC13-218ENST00000490283 TIMM17BO60830 172 aa10.11□□□□□ -0.79
SEC13-218ENST00000490283 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
SEC13-218ENST00000490283 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
SEC13-218ENST00000490283 Q6ZRX8 168 aa10.11□□□□□ -0.79
SEC13-218ENST00000490283 RETNLBQ9BQ08 111 aa10.11□□□□□ -0.79
SEC13-218ENST00000490283 LPAP08519 4548 aa10.1□□□□□ -0.79
SEC13-218ENST00000490283 HINT1P49773 126 aaPredicted RBP10.1□□□□□ -0.79
SEC13-218ENST00000490283 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
SEC13-218ENST00000490283 SPANXCQ9NY87 97 aa10.1□□□□□ -0.79
SEC13-218ENST00000490283 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
SEC13-218ENST00000490283 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
SEC13-218ENST00000490283 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
SEC13-218ENST00000490283 AKR1D1P51857 326 aa10.07□□□□□ -0.8
SEC13-218ENST00000490283 OR13C6PQ8NH95 151 aa10.07□□□□□ -0.8
SEC13-218ENST00000490283 EIF4EBP3O60516 100 aaPredicted RBP10.06□□□□□ -0.8
SEC13-218ENST00000490283 Q8NBF4 154 aa10.06□□□□□ -0.8
SEC13-218ENST00000490283 LITAFQ99732 161 aa10.06□□□□□ -0.8
SEC13-218ENST00000490283 Q9BRP9 147 aa10.06□□□□□ -0.8
SEC13-218ENST00000490283 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
SEC13-218ENST00000490283 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
SEC13-218ENST00000490283 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
SEC13-218ENST00000490283 IGLV9-49A0A0B4J1Y8 123 aa10.04□□□□□ -0.8
SEC13-218ENST00000490283 COPS9Q8WXC6 57 aa10.04□□□□□ -0.8
SEC13-218ENST00000490283 TTTY13Q9BZ97 58 aa10.04□□□□□ -0.8
SEC13-218ENST00000490283 LINC00518Q8N0U6 118 aa10.03□□□□□ -0.8
SEC13-218ENST00000490283 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
SEC13-218ENST00000490283 SPINK1P00995 79 aa10.02□□□□□ -0.81
SEC13-218ENST00000490283 MOBPQ13875 183 aa10.02□□□□□ -0.81
SEC13-218ENST00000490283 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
SEC13-218ENST00000490283 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
SEC13-218ENST00000490283 TPRXLQ17RH7 258 aa10□□□□□ -0.81
SEC13-218ENST00000490283 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
SEC13-218ENST00000490283 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
SEC13-218ENST00000490283 ANKRD39Q53RE8 183 aa9.98□□□□□ -0.81
SEC13-218ENST00000490283 C9orf153Q5TBE3 101 aa9.98□□□□□ -0.81
SEC13-218ENST00000490283 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
SEC13-218ENST00000490283 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
SEC13-218ENST00000490283 IFITM1P13164 125 aa9.97□□□□□ -0.81
SEC13-218ENST00000490283 S100A2P29034 98 aa9.97□□□□□ -0.81
SEC13-218ENST00000490283 S100A1P23297 94 aa9.96□□□□□ -0.82
SEC13-218ENST00000490283 SNRPEP62304 92 aaKnown RBP9.96□□□□□ -0.82
SEC13-218ENST00000490283 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.82
SEC13-218ENST00000490283 Q6ZVH6 145 aa9.96□□□□□ -0.82
SEC13-218ENST00000490283 A0A0U1RQV1 116 aa9.95□□□□□ -0.82
SEC13-218ENST00000490283 COX7BP24311 80 aa9.95□□□□□ -0.82
SEC13-218ENST00000490283 RPS29P62273 56 aaKnown RBP9.94□□□□□ -0.82
SEC13-218ENST00000490283 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
SEC13-218ENST00000490283 C6orf99Q4VX62 202 aa9.93□□□□□ -0.82
SEC13-218ENST00000490283 HSBP1L1C9JCN9 74 aa9.92□□□□□ -0.82
SEC13-218ENST00000490283 S100A6P06703 90 aa9.92□□□□□ -0.82
SEC13-218ENST00000490283 ELOF1P60002 83 aaKnown RBP9.92□□□□□ -0.82
SEC13-218ENST00000490283 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
SEC13-218ENST00000490283 A6NDN8 102 aa9.91□□□□□ -0.82
SEC13-218ENST00000490283 HIST3H2BBQ8N257 126 aa9.91□□□□□ -0.82
SEC13-218ENST00000490283 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
SEC13-218ENST00000490283 SLC25A20O43772 301 aa9.89□□□□□ -0.83
SEC13-218ENST00000490283 MUSTN1Q8IVN3 82 aa9.89□□□□□ -0.83
SEC13-218ENST00000490283 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
SEC13-218ENST00000490283 TRBV7-6A0A0J9YX20 115 aa9.88□□□□□ -0.83
SEC13-218ENST00000490283 SPRR1BP22528 89 aa9.88□□□□□ -0.83
SEC13-218ENST00000490283 TAL2Q16559 108 aa9.88□□□□□ -0.83
SEC13-218ENST00000490283 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
SEC13-218ENST00000490283 A0A1B0GWB2 263 aa9.87□□□□□ -0.83
SEC13-218ENST00000490283 Q8N377 158 aa9.87□□□□□ -0.83
SEC13-218ENST00000490283 DEFB105AQ8NG35 78 aa9.84□□□□□ -0.83
SEC13-218ENST00000490283 A4D1N5 150 aa9.83□□□□□ -0.84
SEC13-218ENST00000490283 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
SEC13-218ENST00000490283 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
SEC13-218ENST00000490283 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
SEC13-218ENST00000490283 NHP2Q9NX24 153 aaKnown RBP9.82□□□□□ -0.84
SEC13-218ENST00000490283 MUC2Q02817 5179 aa9.8□□□□□ -0.84
SEC13-218ENST00000490283 Q1RN00 199 aa9.8□□□□□ -0.84
SEC13-218ENST00000490283 SCGB1D1O95968 90 aa9.79□□□□□ -0.84
SEC13-218ENST00000490283 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
SEC13-218ENST00000490283 VAMP3Q15836 100 aa9.78□□□□□ -0.84
SEC13-218ENST00000490283 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
SEC13-218ENST00000490283 PRO1933Q9H354 126 aa9.78□□□□□ -0.84
SEC13-218ENST00000490283 IGLV5-48A0A075B6I7 105 aa9.74□□□□□ -0.85
SEC13-218ENST00000490283 H7C2G1 150 aa9.74□□□□□ -0.85
SEC13-218ENST00000490283 CD164Q04900 197 aa9.74□□□□□ -0.85
SEC13-218ENST00000490283 SEC61BP60468 96 aaKnown RBP9.73□□□□□ -0.85
SEC13-218ENST00000490283 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
SEC13-218ENST00000490283 MUC17Q685J3 4493 aa9.71□□□□□ -0.85
SEC13-218ENST00000490283 ASB16-AS1Q495Z4 193 aa9.71□□□□□ -0.86
SEC13-218ENST00000490283 F8WEM9 126 aa9.7□□□□□ -0.86
SEC13-218ENST00000490283 LINC01547P58512 204 aaPredicted RBP9.7□□□□□ -0.86
SEC13-218ENST00000490283 SMIM29Q86T20 159 aa9.7□□□□□ -0.86
SEC13-218ENST00000490283 COX8AP10176 69 aa9.69□□□□□ -0.86
SEC13-218ENST00000490283 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
SEC13-218ENST00000490283 LINC00575Q6W349 94 aa9.67□□□□□ -0.86
SEC13-218ENST00000490283 C12orf57Q99622 126 aa9.67□□□□□ -0.86
SEC13-218ENST00000490283 DLEU1O43261 78 aa9.66□□□□□ -0.86
SEC13-218ENST00000490283 BVES-AS1Q5T3Y7 98 aa9.65□□□□□ -0.86
SEC13-218ENST00000490283 XP32Q5T750 250 aa9.65□□□□□ -0.86
SEC13-218ENST00000490283 Q6ZQY7 126 aa9.64□□□□□ -0.87
SEC13-218ENST00000490283 Q5XG85 94 aa9.63□□□□□ -0.87
SEC13-218ENST00000490283 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
SEC13-218ENST00000490283 SPATA45Q537H7 98 aa9.61□□□□□ -0.87
SEC13-218ENST00000490283 RAB37Q96AX2 223 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms