RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
VTI1A-206ENST00000489142 Q6ZRX8 168 aa8.03□□□□□ -1.12
VTI1A-206ENST00000489142 LITAFQ99732 161 aa8.03□□□□□ -1.12
VTI1A-206ENST00000489142 IGLV7-46A0A075B6I9 117 aa8.02□□□□□ -1.13
VTI1A-206ENST00000489142 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
VTI1A-206ENST00000489142 KRTDAPP60985 99 aa8.02□□□□□ -1.13
VTI1A-206ENST00000489142 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
VTI1A-206ENST00000489142 PET117Q6UWS5 81 aa8.02□□□□□ -1.13
VTI1A-206ENST00000489142 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
VTI1A-206ENST00000489142 MOBPQ13875 183 aa8□□□□□ -1.13
VTI1A-206ENST00000489142 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
VTI1A-206ENST00000489142 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
VTI1A-206ENST00000489142 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-206ENST00000489142 SPAG11AQ6PDA7 123 aa7.99□□□□□ -1.13
VTI1A-206ENST00000489142 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
VTI1A-206ENST00000489142 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
VTI1A-206ENST00000489142 TMA7Q9Y2S6 64 aaKnown RBP7.98□□□□□ -1.13
VTI1A-206ENST00000489142 MUC2Q02817 5179 aa7.98□□□□□ -1.13
VTI1A-206ENST00000489142 TIMM17BO60830 172 aa7.97□□□□□ -1.13
VTI1A-206ENST00000489142 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
VTI1A-206ENST00000489142 COA6Q5JTJ3 125 aaKnown RBP7.97□□□□□ -1.13
VTI1A-206ENST00000489142 ATOH7Q8N100 152 aa7.97□□□□□ -1.13
VTI1A-206ENST00000489142 ST20-AS1Q8NBB2 130 aa7.97□□□□□ -1.13
VTI1A-206ENST00000489142 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
VTI1A-206ENST00000489142 CTAG1AP78358 180 aa7.96□□□□□ -1.14
VTI1A-206ENST00000489142 JOSD1Q15040 202 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-206ENST00000489142 ANKRD39Q53RE8 183 aa7.95□□□□□ -1.14
VTI1A-206ENST00000489142 S100A1P23297 94 aa7.94□□□□□ -1.14
VTI1A-206ENST00000489142 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
VTI1A-206ENST00000489142 SCGB1D4Q6XE38 83 aa7.93□□□□□ -1.14
VTI1A-206ENST00000489142 C20orf202A1L168 122 aa7.92□□□□□ -1.14
VTI1A-206ENST00000489142 SPINK1P00995 79 aa7.92□□□□□ -1.14
VTI1A-206ENST00000489142 HINT1P49773 126 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-206ENST00000489142 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-206ENST00000489142 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
VTI1A-206ENST00000489142 SSBP3-AS1Q7Z2R9 100 aa7.9□□□□□ -1.14
VTI1A-206ENST00000489142 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
VTI1A-206ENST00000489142 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
VTI1A-206ENST00000489142 Q8N377 158 aa7.89□□□□□ -1.15
VTI1A-206ENST00000489142 CBY1Q9Y3M2 126 aa7.89□□□□□ -1.15
VTI1A-206ENST00000489142 COX7BP24311 80 aa7.88□□□□□ -1.15
VTI1A-206ENST00000489142 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
VTI1A-206ENST00000489142 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
VTI1A-206ENST00000489142 ELOF1P60002 83 aaKnown RBP7.87□□□□□ -1.15
VTI1A-206ENST00000489142 MUC17Q685J3 4493 aa7.86□□□□□ -1.15
VTI1A-206ENST00000489142 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
VTI1A-206ENST00000489142 DHRS4-AS1Q9P1J3 65 aa7.86□□□□□ -1.15
VTI1A-206ENST00000489142 A0A0U1RQV1 116 aa7.85□□□□□ -1.15
VTI1A-206ENST00000489142 HRCT1Q6UXD1 115 aa7.85□□□□□ -1.15
VTI1A-206ENST00000489142 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
VTI1A-206ENST00000489142 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
VTI1A-206ENST00000489142 A6NDN8 102 aa7.84□□□□□ -1.15
VTI1A-206ENST00000489142 SLC25A20O43772 301 aa7.84□□□□□ -1.15
VTI1A-206ENST00000489142 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.15
VTI1A-206ENST00000489142 HIST3H2BBQ8N257 126 aa7.84□□□□□ -1.15
VTI1A-206ENST00000489142 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
VTI1A-206ENST00000489142 IFITM1P13164 125 aa7.83□□□□□ -1.16
VTI1A-206ENST00000489142 SPRR1BP22528 89 aa7.83□□□□□ -1.16
VTI1A-206ENST00000489142 Q1RN00 199 aa7.83□□□□□ -1.16
VTI1A-206ENST00000489142 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
VTI1A-206ENST00000489142 S100A2P29034 98 aa7.81□□□□□ -1.16
VTI1A-206ENST00000489142 TAL2Q16559 108 aa7.81□□□□□ -1.16
VTI1A-206ENST00000489142 COPS9Q8WXC6 57 aa7.81□□□□□ -1.16
VTI1A-206ENST00000489142 LAMTOR3Q9UHA4 124 aa7.81□□□□□ -1.16
VTI1A-206ENST00000489142 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
VTI1A-206ENST00000489142 Q6ZVH6 145 aa7.8□□□□□ -1.16
VTI1A-206ENST00000489142 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
VTI1A-206ENST00000489142 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
VTI1A-206ENST00000489142 AKR1D1P51857 326 aa7.78□□□□□ -1.16
VTI1A-206ENST00000489142 SMIM11BQ8TCY0 68 aa7.78□□□□□ -1.16
VTI1A-206ENST00000489142 A0A0G2JQZ4 141 aa7.77□□□□□ -1.17
VTI1A-206ENST00000489142 TEX49A0A1B0GTD5 131 aa7.77□□□□□ -1.17
VTI1A-206ENST00000489142 SNRPEP62304 92 aaKnown RBP7.77□□□□□ -1.17
VTI1A-206ENST00000489142 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 HSBP1L1C9JCN9 74 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 H7C2G1 150 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 S100A6P06703 90 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-206ENST00000489142 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-206ENST00000489142 SMIM29Q86T20 159 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
VTI1A-206ENST00000489142 TRAV13-2A0A0B4J235 113 aa7.75□□□□□ -1.17
VTI1A-206ENST00000489142 XP32Q5T750 250 aa7.74□□□□□ -1.17
VTI1A-206ENST00000489142 LIMD2Q9BT23 127 aa7.74□□□□□ -1.17
VTI1A-206ENST00000489142 A4D1N5 150 aa7.73□□□□□ -1.17
VTI1A-206ENST00000489142 PRO1933Q9H354 126 aa7.73□□□□□ -1.17
VTI1A-206ENST00000489142 IGLV5-48A0A075B6I7 105 aa7.72□□□□□ -1.17
VTI1A-206ENST00000489142 SCGB1D1O95968 90 aa7.72□□□□□ -1.17
VTI1A-206ENST00000489142 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
VTI1A-206ENST00000489142 C12orf57Q99622 126 aa7.72□□□□□ -1.17
VTI1A-206ENST00000489142 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
VTI1A-206ENST00000489142 LCE2BO14633 110 aa7.7□□□□□ -1.18
VTI1A-206ENST00000489142 CD164Q04900 197 aa7.69□□□□□ -1.18
VTI1A-206ENST00000489142 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
VTI1A-206ENST00000489142 A6NJY4 79 aa7.68□□□□□ -1.18
VTI1A-206ENST00000489142 VAMP3Q15836 100 aa7.67□□□□□ -1.18
VTI1A-206ENST00000489142 LINC00575Q6W349 94 aa7.67□□□□□ -1.18
VTI1A-206ENST00000489142 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms