RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
CTNNB1-215ENST00000488914 PRO3102Q9H379 93 aa2.29□□□□□ -2.04
CTNNB1-215ENST00000488914 EP400Q96L91 3159 aa2.29□□□□□ -2.04
CTNNB1-215ENST00000488914 CACNA1CQ13936 2221 aa2.29□□□□□ -2.04
CTNNB1-215ENST00000488914 SHANK1Q9Y566 2161 aa2.28□□□□□ -2.04
CTNNB1-215ENST00000488914 LOC730098B7Z3J9 87 aa2.28□□□□□ -2.04
CTNNB1-215ENST00000488914 COX6B2Q6YFQ2 88 aa2.28□□□□□ -2.04
CTNNB1-215ENST00000488914 UBE2DNLQ8IWF7 75 aa2.28□□□□□ -2.04
CTNNB1-215ENST00000488914 K7EQZ3 153 aa2.27□□□□□ -2.05
CTNNB1-215ENST00000488914 TNRC6CQ9HCJ0 1690 aaKnown RBP2.27□□□□□ -2.05
CTNNB1-215ENST00000488914 ANKRD17O75179 2603 aaKnown RBP2.27□□□□□ -2.05
CTNNB1-215ENST00000488914 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
CTNNB1-215ENST00000488914 TP53AIP1Q9HCN2 124 aa2.26□□□□□ -2.05
CTNNB1-215ENST00000488914 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
CTNNB1-215ENST00000488914 TECTAO75443 2155 aa2.25□□□□□ -2.05
CTNNB1-215ENST00000488914 LINC01590Q5TEZ4 76 aa2.25□□□□□ -2.05
CTNNB1-215ENST00000488914 USMG5Q96IX5 58 aa2.25□□□□□ -2.05
CTNNB1-215ENST00000488914 PCNTO95613 3336 aa2.24□□□□□ -2.05
CTNNB1-215ENST00000488914 GOLGA4Q13439 2230 aaKnown RBP2.24□□□□□ -2.05
CTNNB1-215ENST00000488914 PRB3Q04118 309 aaPredicted RBP2.24□□□□□ -2.05
CTNNB1-215ENST00000488914 MRPL34Q9BQ48 92 aaKnown RBP2.23□□□□□ -2.05
CTNNB1-215ENST00000488914 TTTY10Q9BZA0 68 aa2.23□□□□□ -2.05
CTNNB1-215ENST00000488914 PDE4DIPQ5VU43 2346 aa2.23□□□□□ -2.05
CTNNB1-215ENST00000488914 ABCA1O95477 2261 aa2.22□□□□□ -2.05
CTNNB1-215ENST00000488914 TNRC18O15417 2968 aaPredicted RBP2.22□□□□□ -2.05
CTNNB1-215ENST00000488914 CACNA1AO00555 2505 aa2.22□□□□□ -2.05
CTNNB1-215ENST00000488914 POLR2KP53803 58 aaKnown RBP2.22□□□□□ -2.05
CTNNB1-215ENST00000488914 MINOS1Q5TGZ0 78 aa2.22□□□□□ -2.05
CTNNB1-215ENST00000488914 CCL22O00626 93 aa2.21□□□□□ -2.06
CTNNB1-215ENST00000488914 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
CTNNB1-215ENST00000488914 DEFB123Q8N688 67 aa2.21□□□□□ -2.06
CTNNB1-215ENST00000488914 C6orf48Q9UBA6 75 aa2.21□□□□□ -2.06
CTNNB1-215ENST00000488914 A0A0C4DFX4 3053 aa2.2□□□□□ -2.06
CTNNB1-215ENST00000488914 I3L2K1 104 aa2.2□□□□□ -2.06
CTNNB1-215ENST00000488914 LYNX1P0DP58 116 aa2.2□□□□□ -2.06
CTNNB1-215ENST00000488914 CADP27708 2225 aa2.18□□□□□ -2.06
CTNNB1-215ENST00000488914 H0YAA0 97 aa2.18□□□□□ -2.06
CTNNB1-215ENST00000488914 PIGYQ3MUY2 71 aa2.18□□□□□ -2.06
CTNNB1-215ENST00000488914 KNTC1P50748 2209 aa2.18□□□□□ -2.06
CTNNB1-215ENST00000488914 URB1O60287 2271 aaKnown RBP2.17□□□□□ -2.06
CTNNB1-215ENST00000488914 HIVEP2P31629 2446 aa2.17□□□□□ -2.06
CTNNB1-215ENST00000488914 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
CTNNB1-215ENST00000488914 UNC79Q9P2D8 2635 aa2.17□□□□□ -2.06
CTNNB1-215ENST00000488914 CACNA1GO43497 2377 aa2.16□□□□□ -2.06
CTNNB1-215ENST00000488914 BPTFQ12830 3046 aa2.16□□□□□ -2.06
CTNNB1-215ENST00000488914 ASXL3Q9C0F0 2248 aa2.16□□□□□ -2.06
CTNNB1-215ENST00000488914 PKD1L2Q7Z442 2459 aa2.16□□□□□ -2.06
CTNNB1-215ENST00000488914 IGLV5-48A0A075B6I7 105 aa2.15□□□□□ -2.07
CTNNB1-215ENST00000488914 RPL39P62891 51 aaKnown RBP2.15□□□□□ -2.07
CTNNB1-215ENST00000488914 ICE1Q9Y2F5 2266 aa2.14□□□□□ -2.07
CTNNB1-215ENST00000488914 DEFB103AP81534 67 aa2.14□□□□□ -2.07
CTNNB1-215ENST00000488914 COX6A2Q02221 97 aa2.14□□□□□ -2.07
CTNNB1-215ENST00000488914 Q6ZSA8 131 aa2.14□□□□□ -2.07
CTNNB1-215ENST00000488914 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
CTNNB1-215ENST00000488914 BRD3OSQ6XYD6 125 aa2.13□□□□□ -2.07
CTNNB1-215ENST00000488914 SZT2Q5T011 3432 aa2.13□□□□□ -2.07
CTNNB1-215ENST00000488914 COL6A3P12111 3177 aa2.12□□□□□ -2.07
CTNNB1-215ENST00000488914 H3BSH0 61 aa2.12□□□□□ -2.07
CTNNB1-215ENST00000488914 WFDC13Q8IUB5 93 aa2.12□□□□□ -2.07
CTNNB1-215ENST00000488914 RPL39LQ96EH5 51 aaKnown RBP2.12□□□□□ -2.07
CTNNB1-215ENST00000488914 GOLGB1Q14789 3259 aaKnown RBP2.12□□□□□ -2.07
CTNNB1-215ENST00000488914 WFDC10BQ8IUB3 73 aa2.11□□□□□ -2.07
CTNNB1-215ENST00000488914 DEFB106AQ8N104 65 aa2.11□□□□□ -2.07
CTNNB1-215ENST00000488914 SORL1Q92673 2214 aa2.11□□□□□ -2.07
CTNNB1-215ENST00000488914 TRIOBPQ9H2D6 2365 aa2.1□□□□□ -2.07
CTNNB1-215ENST00000488914 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.1□□□□□ -2.076e-6■□□□□ 9.4
CTNNB1-215ENST00000488914 K7EIL1 84 aa2.1□□□□□ -2.07
CTNNB1-215ENST00000488914 RPS27P42677 84 aaKnown RBP2.1□□□□□ -2.07
CTNNB1-215ENST00000488914 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
CTNNB1-215ENST00000488914 CACNA1EQ15878 2313 aa2.09□□□□□ -2.07
CTNNB1-215ENST00000488914 H1FX-AS1Q4G0G2 97 aa2.09□□□□□ -2.07
CTNNB1-215ENST00000488914 ASCC3Q8N3C0 2202 aaKnown RBP2.09□□□□□ -2.08
CTNNB1-215ENST00000488914 BAHCC1Q9P281 2608 aa2.08□□□□□ -2.08
CTNNB1-215ENST00000488914 DEFB131AP59861 70 aa2.07□□□□□ -2.08
CTNNB1-215ENST00000488914 PRCDQ00LT1 54 aa2.07□□□□□ -2.08
CTNNB1-215ENST00000488914 CNOT1A5YKK6 2376 aaKnown RBP2.07□□□□□ -2.08
CTNNB1-215ENST00000488914 DEFB130BP0DP73 79 aa2.06□□□□□ -2.08
CTNNB1-215ENST00000488914 DEFB130AP0DP74 79 aa2.06□□□□□ -2.08
CTNNB1-215ENST00000488914 SPINK9Q5DT21 86 aa2.06□□□□□ -2.08
CTNNB1-215ENST00000488914 LELP1Q5T871 98 aa2.06□□□□□ -2.08
CTNNB1-215ENST00000488914 AHCTF1Q8WYP5 2266 aa2.06□□□□□ -2.08
CTNNB1-215ENST00000488914 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CTNNB1-215ENST00000488914 SPTBN5Q9NRC6 3674 aaKnown RBP2.05□□□□□ -2.08
CTNNB1-215ENST00000488914 ALMS1Q8TCU4 4167 aa2.04□□□□□ -2.08
CTNNB1-215ENST00000488914 VCANP13611 3396 aa2.04□□□□□ -2.08
CTNNB1-215ENST00000488914 UNC80Q8N2C7 3258 aa2.04□□□□□ -2.08
CTNNB1-215ENST00000488914 KAAG1Q9UBP8 84 aa2.04□□□□□ -2.08
CTNNB1-215ENST00000488914 LEAP2Q969E1 77 aa2.03□□□□□ -2.08
CTNNB1-215ENST00000488914 CACNA1BQ00975 2339 aa2.02□□□□□ -2.09
CTNNB1-215ENST00000488914 CHD8Q9HCK8 2581 aa2.02□□□□□ -2.09
CTNNB1-215ENST00000488914 M0QY20 66 aa2.02□□□□□ -2.09
CTNNB1-215ENST00000488914 MMP24-AS1A0A0U1RRL7 71 aa2.01□□□□□ -2.09
CTNNB1-215ENST00000488914 SPRR1AP35321 89 aa2.01□□□□□ -2.09
CTNNB1-215ENST00000488914 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
CTNNB1-215ENST00000488914 WT1-ASQ06250 92 aa2.01□□□□□ -2.09
CTNNB1-215ENST00000488914 PRO0255Q9UI72 69 aa2.01□□□□□ -2.09
CTNNB1-215ENST00000488914 MKI67P46013 3256 aaKnown RBP2□□□□□ -2.09
CTNNB1-215ENST00000488914 H3BUA1 57 aa2□□□□□ -2.09
CTNNB1-215ENST00000488914 Q5VSD8 79 aa2□□□□□ -2.09
CTNNB1-215ENST00000488914 APLNQ9ULZ1 77 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms