RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
HMG20B-212ENST00000487894 HIST1H2BLQ99880 126 aa10.06□□□□□ -0.8
HMG20B-212ENST00000487894 LRP2P98164 4655 aa10.06□□□□□ -0.8
HMG20B-212ENST00000487894 KRTAP13-2Q52LG2 175 aa10.05□□□□□ -0.8
HMG20B-212ENST00000487894 LINC00308Q8TCZ7 52 aa10.04□□□□□ -0.8
HMG20B-212ENST00000487894 ETDCA0A1B0GVM5 59 aa10.03□□□□□ -0.8
HMG20B-212ENST00000487894 IGLV6-57P01721 117 aa10.03□□□□□ -0.8
HMG20B-212ENST00000487894 S100A2P29034 98 aa10.03□□□□□ -0.8
HMG20B-212ENST00000487894 AKR1D1P51857 326 aa10.03□□□□□ -0.8
HMG20B-212ENST00000487894 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
HMG20B-212ENST00000487894 S100A12P80511 92 aa10.02□□□□□ -0.81
HMG20B-212ENST00000487894 S100A6P06703 90 aa10.01□□□□□ -0.81
HMG20B-212ENST00000487894 S100A7L2Q5SY68 101 aa10.01□□□□□ -0.81
HMG20B-212ENST00000487894 SPANXCQ9NY87 97 aa10.01□□□□□ -0.81
HMG20B-212ENST00000487894 B5MCH6 92 aa10□□□□□ -0.81
HMG20B-212ENST00000487894 SMCR5Q8TEV8 140 aa10□□□□□ -0.81
HMG20B-212ENST00000487894 SPRR4Q96PI1 79 aa10□□□□□ -0.81
HMG20B-212ENST00000487894 TRAV23DV6A0A075B6W5 121 aa9.99□□□□□ -0.81
HMG20B-212ENST00000487894 SPANXDQ9BXN6 97 aa9.99□□□□□ -0.81
HMG20B-212ENST00000487894 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
HMG20B-212ENST00000487894 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
HMG20B-212ENST00000487894 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
HMG20B-212ENST00000487894 SNRPEP62304 92 aaKnown RBP9.97□□□□□ -0.81
HMG20B-212ENST00000487894 Q6ZRX8 168 aa9.97□□□□□ -0.81
HMG20B-212ENST00000487894 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
HMG20B-212ENST00000487894 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
HMG20B-212ENST00000487894 Q9BRP9 147 aa9.96□□□□□ -0.82
HMG20B-212ENST00000487894 LPAP08519 4548 aa9.96□□□□□ -0.82
HMG20B-212ENST00000487894 ZNF73O43830 326 aaPredicted RBP9.94□□□□□ -0.82
HMG20B-212ENST00000487894 ERC2-IT1O76042 136 aa9.94□□□□□ -0.82
HMG20B-212ENST00000487894 TSPAN13O95857 204 aa9.94□□□□□ -0.82
HMG20B-212ENST00000487894 C5orf52A6NGY3 159 aa9.93□□□□□ -0.82
HMG20B-212ENST00000487894 LINC00304Q8N9R0 145 aa9.92□□□□□ -0.82
HMG20B-212ENST00000487894 OR13C6PQ8NH95 151 aa9.92□□□□□ -0.82
HMG20B-212ENST00000487894 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
HMG20B-212ENST00000487894 IFITM1P13164 125 aa9.91□□□□□ -0.82
HMG20B-212ENST00000487894 LINC00483Q53H64 154 aa9.91□□□□□ -0.82
HMG20B-212ENST00000487894 CBY1Q9Y3M2 126 aa9.91□□□□□ -0.82
HMG20B-212ENST00000487894 Q6ZVH6 145 aa9.9□□□□□ -0.82
HMG20B-212ENST00000487894 LINC00518Q8N0U6 118 aa9.9□□□□□ -0.82
HMG20B-212ENST00000487894 HSBP1L1C9JCN9 74 aa9.89□□□□□ -0.83
HMG20B-212ENST00000487894 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-212ENST00000487894 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
HMG20B-212ENST00000487894 GAGE2AQ6NT46 116 aa9.88□□□□□ -0.83
HMG20B-212ENST00000487894 MUSTN1Q8IVN3 82 aa9.88□□□□□ -0.83
HMG20B-212ENST00000487894 PRR4Q16378 134 aa9.87□□□□□ -0.83
HMG20B-212ENST00000487894 SCGB1D1O95968 90 aa9.86□□□□□ -0.83
HMG20B-212ENST00000487894 HINT1P49773 126 aaPredicted RBP9.85□□□□□ -0.83
HMG20B-212ENST00000487894 ELOF1P60002 83 aaKnown RBP9.83□□□□□ -0.84
HMG20B-212ENST00000487894 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
HMG20B-212ENST00000487894 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
HMG20B-212ENST00000487894 CTAG1AP78358 180 aa9.82□□□□□ -0.84
HMG20B-212ENST00000487894 ST20-AS1Q8NBB2 130 aa9.82□□□□□ -0.84
HMG20B-212ENST00000487894 Q8NBF4 154 aa9.82□□□□□ -0.84
HMG20B-212ENST00000487894 COX7BP24311 80 aa9.81□□□□□ -0.84
HMG20B-212ENST00000487894 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
HMG20B-212ENST00000487894 IGLV9-49A0A0B4J1Y8 123 aa9.8□□□□□ -0.84
HMG20B-212ENST00000487894 A6NDN8 102 aa9.8□□□□□ -0.84
HMG20B-212ENST00000487894 MOBPQ13875 183 aa9.8□□□□□ -0.84
HMG20B-212ENST00000487894 SPAG11AQ6PDA7 123 aa9.8□□□□□ -0.84
HMG20B-212ENST00000487894 DHRS4-AS1Q9P1J3 65 aa9.8□□□□□ -0.84
HMG20B-212ENST00000487894 TRBV7-6A0A0J9YX20 115 aa9.78□□□□□ -0.84
HMG20B-212ENST00000487894 COX8AP10176 69 aa9.78□□□□□ -0.84
HMG20B-212ENST00000487894 TRAV13-2A0A0B4J235 113 aa9.77□□□□□ -0.85
HMG20B-212ENST00000487894 A0A1B0GWB2 263 aa9.75□□□□□ -0.85
HMG20B-212ENST00000487894 A4D1N5 150 aa9.75□□□□□ -0.85
HMG20B-212ENST00000487894 SPRR1BP22528 89 aa9.75□□□□□ -0.85
HMG20B-212ENST00000487894 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
HMG20B-212ENST00000487894 DLEU1O43261 78 aa9.74□□□□□ -0.85
HMG20B-212ENST00000487894 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
HMG20B-212ENST00000487894 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
HMG20B-212ENST00000487894 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
HMG20B-212ENST00000487894 SPINK1P00995 79 aa9.72□□□□□ -0.85
HMG20B-212ENST00000487894 SPATA45Q537H7 98 aa9.72□□□□□ -0.85
HMG20B-212ENST00000487894 C14orf144Q96I85 54 aa9.71□□□□□ -0.86
HMG20B-212ENST00000487894 HIST1H4GQ99525 98 aa9.71□□□□□ -0.86
HMG20B-212ENST00000487894 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
HMG20B-212ENST00000487894 RPS29P62273 56 aaKnown RBP9.68□□□□□ -0.86
HMG20B-212ENST00000487894 SLC25A34Q6PIV7 304 aa9.68□□□□□ -0.86
HMG20B-212ENST00000487894 C12orf57Q99622 126 aa9.68□□□□□ -0.86
HMG20B-212ENST00000487894 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
HMG20B-212ENST00000487894 LINC01547P58512 204 aaPredicted RBP9.67□□□□□ -0.86
HMG20B-212ENST00000487894 TAL2Q16559 108 aa9.67□□□□□ -0.86
HMG20B-212ENST00000487894 DEFB105AQ8NG35 78 aa9.67□□□□□ -0.86
HMG20B-212ENST00000487894 HIGD1BQ9P298 99 aa9.67□□□□□ -0.86
HMG20B-212ENST00000487894 IGLV5-48A0A075B6I7 105 aa9.66□□□□□ -0.86
HMG20B-212ENST00000487894 TEX49A0A1B0GTD5 131 aa9.66□□□□□ -0.86
HMG20B-212ENST00000487894 TPRXLQ17RH7 258 aa9.66□□□□□ -0.86
HMG20B-212ENST00000487894 C2orf91Q6ZV80 131 aa9.66□□□□□ -0.86
HMG20B-212ENST00000487894 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
HMG20B-212ENST00000487894 Q1RN00 199 aa9.65□□□□□ -0.86
HMG20B-212ENST00000487894 FP248Q71RG6 208 aaPredicted RBP9.65□□□□□ -0.86
HMG20B-212ENST00000487894 Q8N377 158 aa9.65□□□□□ -0.86
HMG20B-212ENST00000487894 NHP2Q9NX24 153 aaKnown RBP9.65□□□□□ -0.86
HMG20B-212ENST00000487894 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
HMG20B-212ENST00000487894 SMIM29Q86T20 159 aa9.64□□□□□ -0.87
HMG20B-212ENST00000487894 VAMP3Q15836 100 aa9.62□□□□□ -0.87
HMG20B-212ENST00000487894 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
HMG20B-212ENST00000487894 SLC25A20O43772 301 aa9.6□□□□□ -0.87
HMG20B-212ENST00000487894 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms