RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 IFI27L1Q96BM0 104 aa4.81□□□□□ -1.64
PRKCB-208ENST00000487674 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
PRKCB-208ENST00000487674 NDUFA12Q9UI09 145 aa4.81□□□□□ -1.64
PRKCB-208ENST00000487674 FAM19A2Q8N3H0 131 aa4.8□□□□□ -1.64
PRKCB-208ENST00000487674 MAP1LC3CQ9BXW4 147 aa4.8□□□□□ -1.64
PRKCB-208ENST00000487674 MYMXA0A1B0GTQ4 84 aa4.79□□□□□ -1.64
PRKCB-208ENST00000487674 SNAPINO95295 136 aa4.79□□□□□ -1.64
PRKCB-208ENST00000487674 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
PRKCB-208ENST00000487674 MOBPQ13875 183 aa4.79□□□□□ -1.64
PRKCB-208ENST00000487674 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
PRKCB-208ENST00000487674 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
PRKCB-208ENST00000487674 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
PRKCB-208ENST00000487674 TRBV10-2A0A0K0K1G8 114 aa4.78□□□□□ -1.64
PRKCB-208ENST00000487674 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
PRKCB-208ENST00000487674 Q6ZRX8 168 aa4.78□□□□□ -1.64
PRKCB-208ENST00000487674 Q8N377 158 aa4.78□□□□□ -1.64
PRKCB-208ENST00000487674 LOC107984156A0A0G2JMH3 177 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 COLCA2A8K830 154 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 SLC25A20O43772 301 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 DDTP30046 118 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 ARL17AQ8IVW1 177 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 Q9BRP9 147 aa4.77□□□□□ -1.65
PRKCB-208ENST00000487674 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
PRKCB-208ENST00000487674 HSBP1O75506 76 aa4.76□□□□□ -1.65
PRKCB-208ENST00000487674 TSPEAR-AS2P59090 65 aa4.76□□□□□ -1.65
PRKCB-208ENST00000487674 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
PRKCB-208ENST00000487674 H0Y8G0 127 aa4.75□□□□□ -1.65
PRKCB-208ENST00000487674 LEPROTO15243 131 aa4.75□□□□□ -1.65
PRKCB-208ENST00000487674 PLNP26678 52 aa4.75□□□□□ -1.65
PRKCB-208ENST00000487674 MIEN1Q9BRT3 115 aa4.75□□□□□ -1.65
PRKCB-208ENST00000487674 J3QQQ9 107 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 NDUFC2O95298 119 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 IGLV6-57P01721 117 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 NMUP48645 174 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 JOSD1Q15040 202 aaPredicted RBP4.74□□□□□ -1.65
PRKCB-208ENST00000487674 S100A7L2Q5SY68 101 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 C9orf153Q5TBE3 101 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
PRKCB-208ENST00000487674 TRAV23DV6A0A075B6W5 121 aa4.73□□□□□ -1.65
PRKCB-208ENST00000487674 HERVK_113P61574 105 aa4.73□□□□□ -1.65
PRKCB-208ENST00000487674 ZNF73O43830 326 aaPredicted RBP4.72□□□□□ -1.65
PRKCB-208ENST00000487674 DPM2O94777 84 aa4.72□□□□□ -1.65
PRKCB-208ENST00000487674 LEPROTL1O95214 131 aa4.72□□□□□ -1.65
PRKCB-208ENST00000487674 LGALS3P17931 250 aaKnown RBP4.72□□□□□ -1.65
PRKCB-208ENST00000487674 C5orf52A6NGY3 159 aa4.71□□□□□ -1.66
PRKCB-208ENST00000487674 HSPB8Q9UJY1 196 aa4.71□□□□□ -1.66
PRKCB-208ENST00000487674 SERF1AO75920 110 aa4.7□□□□□ -1.66
PRKCB-208ENST00000487674 IGKCP01834 107 aa4.7□□□□□ -1.66
PRKCB-208ENST00000487674 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
PRKCB-208ENST00000487674 CBY1Q9Y3M2 126 aa4.7□□□□□ -1.66
PRKCB-208ENST00000487674 TRGC2P03986 189 aa4.69□□□□□ -1.66
PRKCB-208ENST00000487674 HINT1P49773 126 aaPredicted RBP4.69□□□□□ -1.66
PRKCB-208ENST00000487674 NPC2P61916 151 aa4.69□□□□□ -1.66
PRKCB-208ENST00000487674 ST20-AS1Q8NBB2 130 aa4.69□□□□□ -1.66
PRKCB-208ENST00000487674 PMCHL2Q9BQD1 86 aa4.69□□□□□ -1.66
PRKCB-208ENST00000487674 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
PRKCB-208ENST00000487674 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
PRKCB-208ENST00000487674 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
PRKCB-208ENST00000487674 SPRR1BP22528 89 aa4.68□□□□□ -1.66
PRKCB-208ENST00000487674 ADAMTSL4-AS1Q5T5F5 129 aa4.68□□□□□ -1.66
PRKCB-208ENST00000487674 SLC25A34Q6PIV7 304 aa4.68□□□□□ -1.66
PRKCB-208ENST00000487674 E9PLD3 99 aa4.67□□□□□ -1.66
PRKCB-208ENST00000487674 FABP4P15090 132 aa4.67□□□□□ -1.66
PRKCB-208ENST00000487674 DHRS4-AS1Q9P1J3 65 aa4.67□□□□□ -1.66
PRKCB-208ENST00000487674 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
PRKCB-208ENST00000487674 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
PRKCB-208ENST00000487674 LOC105371267A0A1B0GV96 52 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BKO60814 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BJP06899 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BOP23527 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BBP33778 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BDP58876 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BCP62807 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST2H2BEQ16778 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 PCOTHQ58A44 107 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.65□□□□□ -1.67
PRKCB-208ENST00000487674 LINC00308Q8TCZ7 52 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BHQ93079 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 LITAFQ99732 161 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BNQ99877 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 HIST1H2BMQ99879 126 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 SPANXDQ9BXN6 97 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 LAMTOR3Q9UHA4 124 aa4.65□□□□□ -1.67
PRKCB-208ENST00000487674 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
PRKCB-208ENST00000487674 TIMM17BO60830 172 aa4.64□□□□□ -1.67
PRKCB-208ENST00000487674 MT1HP80294 61 aa4.64□□□□□ -1.67
PRKCB-208ENST00000487674 HRCT1Q6UXD1 115 aa4.64□□□□□ -1.67
PRKCB-208ENST00000487674 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
PRKCB-208ENST00000487674 C9orf92A6NGG3 77 aa4.63□□□□□ -1.67
PRKCB-208ENST00000487674 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
PRKCB-208ENST00000487674 ELOF1P60002 83 aaKnown RBP4.63□□□□□ -1.67
PRKCB-208ENST00000487674 CD164Q04900 197 aa4.63□□□□□ -1.67
PRKCB-208ENST00000487674 COA6Q5JTJ3 125 aaKnown RBP4.63□□□□□ -1.67
PRKCB-208ENST00000487674 COX7BP24311 80 aa4.62□□□□□ -1.67
PRKCB-208ENST00000487674 ZNF815PA8K554 130 aa4.61□□□□□ -1.67
PRKCB-208ENST00000487674 SYS1-DBNDD2H3BUS1 97 aa4.61□□□□□ -1.67
PRKCB-208ENST00000487674 Q1RN00 199 aa4.61□□□□□ -1.67
PRKCB-208ENST00000487674 C6orf99Q4VX62 202 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms