RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 HIST1H2BBP33778 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST1H2BDP58876 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST1H2BCP62807 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST2H2BEQ16778 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST1H2BHQ93079 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST1H2BNQ99877 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 HIST1H2BMQ99879 126 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
PFDN4-204ENST00000487129 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
PFDN4-204ENST00000487129 SPINK1P00995 79 aa8.22□□□□□ -1.09
PFDN4-204ENST00000487129 PRYO14603 147 aa8.21□□□□□ -1.1
PFDN4-204ENST00000487129 LGALS3P17931 250 aaKnown RBP8.21□□□□□ -1.1
PFDN4-204ENST00000487129 LCE1DQ5T752 114 aa8.21□□□□□ -1.1
PFDN4-204ENST00000487129 Q8N377 158 aa8.21□□□□□ -1.1
PFDN4-204ENST00000487129 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
PFDN4-204ENST00000487129 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
PFDN4-204ENST00000487129 NCR3O14931 201 aa8.19□□□□□ -1.1
PFDN4-204ENST00000487129 SPRR1AP35321 89 aa8.19□□□□□ -1.1
PFDN4-204ENST00000487129 TRBV10-2A0A0K0K1G8 114 aa8.18□□□□□ -1.1
PFDN4-204ENST00000487129 E9PLD3 99 aa8.18□□□□□ -1.1
PFDN4-204ENST00000487129 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
PFDN4-204ENST00000487129 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
PFDN4-204ENST00000487129 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
PFDN4-204ENST00000487129 S100A12P80511 92 aa8.16□□□□□ -1.1
PFDN4-204ENST00000487129 LINC01545Q5VT33 79 aa8.16□□□□□ -1.1
PFDN4-204ENST00000487129 PET117Q6UWS5 81 aa8.16□□□□□ -1.1
PFDN4-204ENST00000487129 A0A0J9YXY3 114 aa8.15□□□□□ -1.1
PFDN4-204ENST00000487129 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
PFDN4-204ENST00000487129 NDUFC2O95298 119 aa8.15□□□□□ -1.1
PFDN4-204ENST00000487129 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
PFDN4-204ENST00000487129 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
PFDN4-204ENST00000487129 MIEN1Q9BRT3 115 aa8.15□□□□□ -1.1
PFDN4-204ENST00000487129 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
PFDN4-204ENST00000487129 DDTP30046 118 aa8.14□□□□□ -1.11
PFDN4-204ENST00000487129 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
PFDN4-204ENST00000487129 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
PFDN4-204ENST00000487129 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
PFDN4-204ENST00000487129 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
PFDN4-204ENST00000487129 B5MCH6 92 aa8.11□□□□□ -1.11
PFDN4-204ENST00000487129 SLC25A20O43772 301 aa8.11□□□□□ -1.11
PFDN4-204ENST00000487129 IGLV6-57P01721 117 aa8.11□□□□□ -1.11
PFDN4-204ENST00000487129 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
PFDN4-204ENST00000487129 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
PFDN4-204ENST00000487129 IGLV8-61A0A075B6I0 122 aa8.1□□□□□ -1.11
PFDN4-204ENST00000487129 TIMM17BO60830 172 aa8.1□□□□□ -1.11
PFDN4-204ENST00000487129 MOBPQ13875 183 aa8.1□□□□□ -1.11
PFDN4-204ENST00000487129 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
PFDN4-204ENST00000487129 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
PFDN4-204ENST00000487129 LITAFQ99732 161 aa8.09□□□□□ -1.11
PFDN4-204ENST00000487129 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
PFDN4-204ENST00000487129 NPC2P61916 151 aa8.08□□□□□ -1.12
PFDN4-204ENST00000487129 KRTDAPP60985 99 aa8.07□□□□□ -1.12
PFDN4-204ENST00000487129 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
PFDN4-204ENST00000487129 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
PFDN4-204ENST00000487129 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
PFDN4-204ENST00000487129 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
PFDN4-204ENST00000487129 IGLV9-49A0A0B4J1Y8 123 aa8.06□□□□□ -1.12
PFDN4-204ENST00000487129 ZNF815PA8K554 130 aa8.06□□□□□ -1.12
PFDN4-204ENST00000487129 Q6ZRX8 168 aa8.06□□□□□ -1.12
PFDN4-204ENST00000487129 SPANXCQ9NY87 97 aa8.06□□□□□ -1.12
PFDN4-204ENST00000487129 C20orf202A1L168 122 aa8.05□□□□□ -1.12
PFDN4-204ENST00000487129 ERC2-IT1O76042 136 aa8.05□□□□□ -1.12
PFDN4-204ENST00000487129 JOSD1Q15040 202 aaPredicted RBP8.05□□□□□ -1.12
PFDN4-204ENST00000487129 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
PFDN4-204ENST00000487129 Q9BRP9 147 aa8.05□□□□□ -1.12
PFDN4-204ENST00000487129 SSPOA2VEC9 5147 aa8.05□□□□□ -1.12
PFDN4-204ENST00000487129 ZNF73O43830 326 aaPredicted RBP8.04□□□□□ -1.12
PFDN4-204ENST00000487129 AKR1D1P51857 326 aa8.04□□□□□ -1.12
PFDN4-204ENST00000487129 USH2AO75445 5202 aa8.04□□□□□ -1.12
PFDN4-204ENST00000487129 M0R2T5 61 aa8.03□□□□□ -1.12
PFDN4-204ENST00000487129 TTTY13Q9BZ97 58 aa8.03□□□□□ -1.12
PFDN4-204ENST00000487129 HINT1P49773 126 aaPredicted RBP8.02□□□□□ -1.13
PFDN4-204ENST00000487129 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
PFDN4-204ENST00000487129 LINC00518Q8N0U6 118 aa8.01□□□□□ -1.13
PFDN4-204ENST00000487129 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
PFDN4-204ENST00000487129 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
PFDN4-204ENST00000487129 SPANXDQ9BXN6 97 aa8□□□□□ -1.13
PFDN4-204ENST00000487129 S100A1P23297 94 aa7.99□□□□□ -1.13
PFDN4-204ENST00000487129 SCGB1D4Q6XE38 83 aa7.99□□□□□ -1.13
PFDN4-204ENST00000487129 KRTAP4-9Q9BYQ8 210 aa7.99□□□□□ -1.13
PFDN4-204ENST00000487129 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
PFDN4-204ENST00000487129 Q6ZVH6 145 aa7.98□□□□□ -1.13
PFDN4-204ENST00000487129 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
PFDN4-204ENST00000487129 IFITM1P13164 125 aa7.97□□□□□ -1.13
PFDN4-204ENST00000487129 ATOH7Q8N100 152 aa7.97□□□□□ -1.13
PFDN4-204ENST00000487129 COPS9Q8WXC6 57 aa7.97□□□□□ -1.13
PFDN4-204ENST00000487129 DHRS4-AS1Q9P1J3 65 aa7.96□□□□□ -1.14
PFDN4-204ENST00000487129 PCP2Q8IVA1 136 aa7.95□□□□□ -1.14
PFDN4-204ENST00000487129 HIST3H2BBQ8N257 126 aa7.95□□□□□ -1.14
PFDN4-204ENST00000487129 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
PFDN4-204ENST00000487129 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
PFDN4-204ENST00000487129 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
PFDN4-204ENST00000487129 SPRR1BP22528 89 aa7.93□□□□□ -1.14
PFDN4-204ENST00000487129 S100A2P29034 98 aa7.93□□□□□ -1.14
PFDN4-204ENST00000487129 ELOF1P60002 83 aaKnown RBP7.93□□□□□ -1.14
PFDN4-204ENST00000487129 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
PFDN4-204ENST00000487129 A6NJY4 79 aa7.92□□□□□ -1.14
PFDN4-204ENST00000487129 COX7BP24311 80 aa7.92□□□□□ -1.14
PFDN4-204ENST00000487129 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms