RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 REG3GQ6UW15 175 aa5.9□□□□□ -1.46
MCF2L-227ENST00000486806 RAB37Q96AX2 223 aa5.9□□□□□ -1.46
MCF2L-227ENST00000486806 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.46
MCF2L-227ENST00000486806 PCP4L1A6NKN8 68 aa5.89□□□□□ -1.47
MCF2L-227ENST00000486806 ZNF73O43830 326 aaPredicted RBP5.89□□□□□ -1.47
MCF2L-227ENST00000486806 BCE1O60756 84 aa5.89□□□□□ -1.47
MCF2L-227ENST00000486806 SMIM11BQ8TCY0 68 aa5.89□□□□□ -1.47
MCF2L-227ENST00000486806 PRO1854Q9UHT4 67 aa5.89□□□□□ -1.47
MCF2L-227ENST00000486806 CBY1Q9Y3M2 126 aa5.89□□□□□ -1.47
MCF2L-227ENST00000486806 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
MCF2L-227ENST00000486806 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
MCF2L-227ENST00000486806 KRTAP13-1Q8IUC0 172 aa5.88□□□□□ -1.47
MCF2L-227ENST00000486806 SNHG12Q9BXW3 62 aa5.88□□□□□ -1.47
MCF2L-227ENST00000486806 RPL28P46779 137 aaKnown RBP5.87□□□□□ -1.47
MCF2L-227ENST00000486806 BATFQ16520 125 aa5.87□□□□□ -1.47
MCF2L-227ENST00000486806 C6orf99Q4VX62 202 aa5.87□□□□□ -1.47
MCF2L-227ENST00000486806 Q8N1X5 172 aa5.87□□□□□ -1.47
MCF2L-227ENST00000486806 DIRC1Q969H9 104 aa5.87□□□□□ -1.47
MCF2L-227ENST00000486806 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
MCF2L-227ENST00000486806 B5MCH6 92 aa5.86□□□□□ -1.47
MCF2L-227ENST00000486806 TSPAN13O95857 204 aa5.86□□□□□ -1.47
MCF2L-227ENST00000486806 IGLV7-43P04211 117 aa5.86□□□□□ -1.47
MCF2L-227ENST00000486806 Q5VSD8 79 aa5.86□□□□□ -1.47
MCF2L-227ENST00000486806 TRBV7-6A0A0J9YX20 115 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 ETDCA0A1B0GVM5 59 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 H0Y9J4 135 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 H7C2G1 150 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
MCF2L-227ENST00000486806 PRLHP81277 87 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 Q6ZRX8 168 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
MCF2L-227ENST00000486806 PLA2G1BP04054 148 aaKnown RBP5.84□□□□□ -1.47
MCF2L-227ENST00000486806 Q1RN00 199 aa5.84□□□□□ -1.47
MCF2L-227ENST00000486806 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.48
MCF2L-227ENST00000486806 TRIAP1O43715 76 aa5.83□□□□□ -1.48
MCF2L-227ENST00000486806 ZNF861PO60384 105 aa5.83□□□□□ -1.48
MCF2L-227ENST00000486806 UBE2AP49459 152 aa5.83□□□□□ -1.48
MCF2L-227ENST00000486806 Q9BRP9 147 aa5.83□□□□□ -1.48
MCF2L-227ENST00000486806 TAX1BP3O14907 124 aa5.82□□□□□ -1.48
MCF2L-227ENST00000486806 COX7BP24311 80 aa5.82□□□□□ -1.48
MCF2L-227ENST00000486806 SMCR5Q8TEV8 140 aa5.82□□□□□ -1.48
MCF2L-227ENST00000486806 COL5A1-AS1Q5SY13 56 aa5.8□□□□□ -1.48
MCF2L-227ENST00000486806 INAFM2P0DMQ5 153 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 VAMP3Q15836 100 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 SPINK6Q6UWN8 80 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 LINC00575Q6W349 94 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 NAA38Q9BRA0 125 aaKnown RBP5.79□□□□□ -1.48
MCF2L-227ENST00000486806 HIGD2AQ9BW72 106 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 DHRS4-AS1Q9P1J3 65 aa5.79□□□□□ -1.48
MCF2L-227ENST00000486806 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
MCF2L-227ENST00000486806 H0YGX0 51 aa5.78□□□□□ -1.48
MCF2L-227ENST00000486806 ERC2-IT1O76042 136 aa5.78□□□□□ -1.48
MCF2L-227ENST00000486806 PSMB2P49721 201 aa5.78□□□□□ -1.48
MCF2L-227ENST00000486806 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
MCF2L-227ENST00000486806 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
MCF2L-227ENST00000486806 H3BUT2 72 aa5.77□□□□□ -1.49
MCF2L-227ENST00000486806 COX6CP09669 75 aa5.77□□□□□ -1.49
MCF2L-227ENST00000486806 A0A1B0GX51 115 aa5.76□□□□□ -1.49
MCF2L-227ENST00000486806 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
MCF2L-227ENST00000486806 SRRM2Q9UQ35 2752 aaKnown RBP5.76□□□□□ -1.49
MCF2L-227ENST00000486806 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 hADV29S1A0JD25 119 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 LST1O00453 97 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 SLC25A20O43772 301 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 SPRR4Q96PI1 79 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
MCF2L-227ENST00000486806 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
MCF2L-227ENST00000486806 PCLOQ9Y6V0 5065 aa5.74□□□□□ -1.49
MCF2L-227ENST00000486806 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
MCF2L-227ENST00000486806 LINC01547P58512 204 aaPredicted RBP5.74□□□□□ -1.49
MCF2L-227ENST00000486806 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
MCF2L-227ENST00000486806 LYRM7Q5U5X0 104 aa5.74□□□□□ -1.49
MCF2L-227ENST00000486806 ST20-AS1Q8NBB2 130 aa5.74□□□□□ -1.49
MCF2L-227ENST00000486806 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
MCF2L-227ENST00000486806 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
MCF2L-227ENST00000486806 TCL1BO95988 128 aa5.73□□□□□ -1.49
MCF2L-227ENST00000486806 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.73□□□□□ -1.49
MCF2L-227ENST00000486806 Q6ZQY7 126 aa5.73□□□□□ -1.49
MCF2L-227ENST00000486806 TRACP01848 142 aa5.72□□□□□ -1.49
MCF2L-227ENST00000486806 FABP2P12104 132 aa5.72□□□□□ -1.49
MCF2L-227ENST00000486806 SPRR1BP22528 89 aa5.72□□□□□ -1.49
MCF2L-227ENST00000486806 TNXBP22105 4242 aa5.71□□□□□ -1.49
MCF2L-227ENST00000486806 TRBV20-1A0A075B6N2 111 aa5.71□□□□□ -1.5
MCF2L-227ENST00000486806 ATXN8Q156A1 80 aa5.71□□□□□ -1.5
MCF2L-227ENST00000486806 SNCGO76070 127 aa5.7□□□□□ -1.5
MCF2L-227ENST00000486806 GAGE2AQ6NT46 116 aa5.7□□□□□ -1.5
MCF2L-227ENST00000486806 A0A087X002 238 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 TEX49A0A1B0GTD5 131 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 DNAL4O96015 105 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 OCIAD2Q56VL3 154 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 Q8N377 158 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 PPDPFLQ8WWR9 84 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 ANAPC11Q9NYG5 84 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 SPCS1Q9Y6A9 102 aa5.69□□□□□ -1.5
MCF2L-227ENST00000486806 SMIM29Q86T20 159 aa5.68□□□□□ -1.5
MCF2L-227ENST00000486806 K7EP34 96 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms