RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TENM4Q6N022 2769 aa8.9□□□□□ -0.98
HMGN1-216ENST00000486741 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
HMGN1-216ENST00000486741 SEC61GP60059 68 aa8.9□□□□□ -0.99
HMGN1-216ENST00000486741 ATP5EP2Q5VTU8 51 aa8.9□□□□□ -0.99
HMGN1-216ENST00000486741 LY6G6CO95867 125 aa8.88□□□□□ -0.99
HMGN1-216ENST00000486741 CRYGAP11844 174 aa8.87□□□□□ -0.99
HMGN1-216ENST00000486741 K7EIL1 84 aa8.87□□□□□ -0.99
HMGN1-216ENST00000486741 C7orf33Q8WU49 177 aa8.87□□□□□ -0.99
HMGN1-216ENST00000486741 H3BNG1 76 aa8.86□□□□□ -0.99
HMGN1-216ENST00000486741 Q6ZRP5 223 aa8.86□□□□□ -0.99
HMGN1-216ENST00000486741 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-216ENST00000486741 DHRS4-AS1Q9P1J3 65 aa8.85□□□□□ -0.99
HMGN1-216ENST00000486741 PRLHP81277 87 aa8.85□□□□□ -0.99
HMGN1-216ENST00000486741 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
HMGN1-216ENST00000486741 PRR34Q9NV39 138 aa8.85□□□□□ -0.99
HMGN1-216ENST00000486741 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
HMGN1-216ENST00000486741 RPS28P62857 69 aaKnown RBP8.84□□□□□ -0.99
HMGN1-216ENST00000486741 MP68P56378 58 aa8.83□□□□□ -1
HMGN1-216ENST00000486741 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
HMGN1-216ENST00000486741 NDUFS5O43920 106 aa8.83□□□□□ -1
HMGN1-216ENST00000486741 PMAIP1Q13794 54 aa8.83□□□□□ -1
HMGN1-216ENST00000486741 C9orf129Q5T035 196 aaKnown RBP8.83□□□□□ -1
HMGN1-216ENST00000486741 FAM168BA1KXE4 195 aa8.82□□□□□ -1
HMGN1-216ENST00000486741 NDUFC1O43677 76 aa8.82□□□□□ -1
HMGN1-216ENST00000486741 LINC00167Q96N53 147 aa8.82□□□□□ -1
HMGN1-216ENST00000486741 H0Y9J4 135 aa8.82□□□□□ -1
HMGN1-216ENST00000486741 REG3GQ6UW15 175 aa8.81□□□□□ -1
HMGN1-216ENST00000486741 NBPF19A0A087WUL8 3843 aa8.81□□□□□ -1
HMGN1-216ENST00000486741 PSPHP1O15172 72 aa8.81□□□□□ -1
HMGN1-216ENST00000486741 C1orf137Q5JT78 98 aa8.81□□□□□ -1
HMGN1-216ENST00000486741 Q8N9L7 120 aa8.8□□□□□ -1
HMGN1-216ENST00000486741 CASC10Q5T4H9 136 aa8.8□□□□□ -1
HMGN1-216ENST00000486741 C15orf56Q8N910 161 aa8.8□□□□□ -1
HMGN1-216ENST00000486741 DEFB116Q30KQ4 102 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 NUPR2A6NF83 97 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 VPREB1P12018 145 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 Q6ZVQ6 151 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 MDFIQ99750 246 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 IGLV9-49A0A0B4J1Y8 123 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 TRBV7-6A0A0J9YX20 115 aa8.79□□□□□ -1
HMGN1-216ENST00000486741 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
HMGN1-216ENST00000486741 CHTF8P0CG12 524 aa8.78□□□□□ -1
HMGN1-216ENST00000486741 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
HMGN1-216ENST00000486741 DNAH10OSP0CZ25 163 aa8.77□□□□□ -1
HMGN1-216ENST00000486741 WFDC13Q8IUB5 93 aa8.77□□□□□ -1.01
HMGN1-216ENST00000486741 ATP5EP56381 51 aaPredicted RBP8.77□□□□□ -1.01
HMGN1-216ENST00000486741 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
HMGN1-216ENST00000486741 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
HMGN1-216ENST00000486741 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
HMGN1-216ENST00000486741 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
HMGN1-216ENST00000486741 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-216ENST00000486741 ELOF1P60002 83 aaKnown RBP8.75□□□□□ -1.01
HMGN1-216ENST00000486741 OTOGQ6ZRI0 2925 aa8.75□□□□□ -1.01
HMGN1-216ENST00000486741 VWFP04275 2813 aa8.75□□□□□ -1.01
HMGN1-216ENST00000486741 A6NED7 52 aa8.74□□□□□ -1.01
HMGN1-216ENST00000486741 NDUFB1O75438 58 aa8.74□□□□□ -1.01
HMGN1-216ENST00000486741 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-216ENST00000486741 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
HMGN1-216ENST00000486741 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
HMGN1-216ENST00000486741 PRYO14603 147 aa8.72□□□□□ -1.01
HMGN1-216ENST00000486741 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
HMGN1-216ENST00000486741 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.01
HMGN1-216ENST00000486741 A0A087WSZ3 146 aa8.71□□□□□ -1.01
HMGN1-216ENST00000486741 F8WDY8 70 aa8.71□□□□□ -1.02
HMGN1-216ENST00000486741 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.02
HMGN1-216ENST00000486741 Q6ZQT0 140 aa8.7□□□□□ -1.02
HMGN1-216ENST00000486741 Q8NDZ9 215 aa8.7□□□□□ -1.02
HMGN1-216ENST00000486741 Q9BRP9 147 aa8.7□□□□□ -1.02
HMGN1-216ENST00000486741 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
HMGN1-216ENST00000486741 TM2D3Q9BRN9 247 aa8.69□□□□□ -1.02
HMGN1-216ENST00000486741 PDZD2O15018 2839 aa8.68□□□□□ -1.02
HMGN1-216ENST00000486741 FBN1P35555 2871 aaKnown RBP8.68□□□□□ -1.02
HMGN1-216ENST00000486741 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
HMGN1-216ENST00000486741 Q6ZRX8 168 aa8.67□□□□□ -1.02
HMGN1-216ENST00000486741 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
HMGN1-216ENST00000486741 NBDYA0A0U1RRE5 68 aa8.66□□□□□ -1.02
HMGN1-216ENST00000486741 WIPF1O43516 503 aa8.66□□□□□ -1.02
HMGN1-216ENST00000486741 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
HMGN1-216ENST00000486741 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
HMGN1-216ENST00000486741 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.03
HMGN1-216ENST00000486741 VPS13CQ709C8 3753 aa8.64□□□□□ -1.03
HMGN1-216ENST00000486741 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
HMGN1-216ENST00000486741 PRR15LQ9BU68 103 aa8.62□□□□□ -1.03
HMGN1-216ENST00000486741 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
HMGN1-216ENST00000486741 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
HMGN1-216ENST00000486741 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
HMGN1-216ENST00000486741 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
HMGN1-216ENST00000486741 LOC110117498A0A087WWA1 95 aa8.59□□□□□ -1.03
HMGN1-216ENST00000486741 EPM2AB3EWF7 344 aa8.59□□□□□ -1.03
HMGN1-216ENST00000486741 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
HMGN1-216ENST00000486741 LINC00476Q8WZB0 136 aa8.58□□□□□ -1.04
HMGN1-216ENST00000486741 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
HMGN1-216ENST00000486741 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
HMGN1-216ENST00000486741 CIRBP-AS1Q8TBR5 109 aa8.58□□□□□ -1.04
HMGN1-216ENST00000486741 ERC2-IT1O76042 136 aa8.57□□□□□ -1.04
HMGN1-216ENST00000486741 Q8N377 158 aa8.57□□□□□ -1.04
HMGN1-216ENST00000486741 CXCL6P80162 114 aa8.56□□□□□ -1.04
HMGN1-216ENST00000486741 Q8NBF4 154 aa8.54□□□□□ -1.04
HMGN1-216ENST00000486741 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms