RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CICQ96RK0 1608 aaPredicted RBP-0.53□□□□□ -2.49
LTN1-206ENST00000486427 SONP18583 2426 aaKnown RBP-0.53□□□□□ -2.49
LTN1-206ENST00000486427 FANCAO15360 1455 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 MAGI2Q86UL8 1455 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 EPPK1P58107 5090 aaKnown RBP-0.53□□□□□ -2.49
LTN1-206ENST00000486427 HIVEP1P15822 2718 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 EPG5Q9HCE0 2579 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 ALKAL2Q6UX46 152 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 ACBD7Q8N6N7 88 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 PKHD1L1Q86WI1 4243 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 AKAP12Q02952 1782 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 MYO3AQ8NEV4 1616 aa-0.53□□□□□ -2.49
LTN1-206ENST00000486427 DNAH3Q8TD57 4116 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 C4AP0C0L4 1744 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 C4BP0C0L5 1744 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 UBE2D4Q9Y2X8 147 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 PDE4DIPQ5VU43 2346 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 ZZEF1O43149 2961 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 TACC2O95359 2948 aa-0.54□□□□□ -2.5
LTN1-206ENST00000486427 SPG11Q96JI7 2443 aa-0.55□□□□□ -2.5
LTN1-206ENST00000486427 TIAM2Q8IVF5 1701 aa-0.55□□□□□ -2.5
LTN1-206ENST00000486427 TEP1Q99973 2627 aaKnown RBP-0.55□□□□□ -2.5
LTN1-206ENST00000486427 HECTD1Q9ULT8 2610 aa-0.55□□□□□ -2.5
LTN1-206ENST00000486427 COX7BP24311 80 aa-0.55□□□□□ -2.5
LTN1-206ENST00000486427 KRTAP20-2Q3LI61 65 aa-0.55□□□□□ -2.5
LTN1-206ENST00000486427 ANK3Q12955 4377 aaKnown RBP-0.55□□□□□ -2.5
LTN1-206ENST00000486427 ABCC10Q5T3U5 1492 aa-0.55□□□□□ -2.5
LTN1-206ENST00000486427 APOBP04114 4563 aaKnown RBP-0.56□□□□□ -2.5
LTN1-206ENST00000486427 NBPF19A0A087WUL8 3843 aa-0.56□□□□□ -2.5
LTN1-206ENST00000486427 H0YGG7 62 aa-0.56□□□□□ -2.5
LTN1-206ENST00000486427 M0R143 59 aa-0.56□□□□□ -2.5
LTN1-206ENST00000486427 LRRC7Q96NW7 1537 aa-0.56□□□□□ -2.5
LTN1-206ENST00000486427 SUPT6HQ7KZ85 1726 aaKnown RBP-0.56□□□□□ -2.5
LTN1-206ENST00000486427 LRRC9Q6ZRR7 1453 aa-0.56□□□□□ -2.5
LTN1-206ENST00000486427 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.56□□□□□ -2.5
LTN1-206ENST00000486427 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
LTN1-206ENST00000486427 DNAH11Q96DT5 4516 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 RGPD8O14715 1765 aaPredicted RBP-0.57□□□□□ -2.5
LTN1-206ENST00000486427 RGPD4Q7Z3J3 1758 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 RGPD5Q99666 1765 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 NDUFA3O95167 84 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 SPRR2FQ96RM1 72 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 C20orf78Q9BR46 151 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 ATP10BO94823 1461 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 AKAP9Q99996 3911 aa-0.57□□□□□ -2.5
LTN1-206ENST00000486427 TROQ12816 1431 aaPredicted RBP-0.57□□□□□ -2.5
LTN1-206ENST00000486427 RGPD3A6NKT7 1758 aaPredicted RBP-0.57□□□□□ -2.5
LTN1-206ENST00000486427 POLR1AO95602 1720 aaPredicted RBP-0.58□□□□□ -2.5
LTN1-206ENST00000486427 HMGN2P05204 90 aaKnown RBP-0.58□□□□□ -2.5
LTN1-206ENST00000486427 NMSQ5H8A3 153 aa-0.58□□□□□ -2.5
LTN1-206ENST00000486427 SNHG12Q9BXW3 62 aa-0.58□□□□□ -2.5
LTN1-206ENST00000486427 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.58□□□□□ -2.5
LTN1-206ENST00000486427 LYSTQ99698 3801 aa-0.58□□□□□ -2.5
LTN1-206ENST00000486427 NEXMIFQ5QGS0 1516 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.59□□□□□ -2.5
LTN1-206ENST00000486427 ITPR3Q14573 2671 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 ATP7BP35670 1465 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 SCN11AQ9UI33 1791 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 A0A1B0GUT8 65 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 IQCF6A8MYZ5 107 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 GAFA1Q96PS6 74 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 FASNP49327 2511 aaKnown RBP-0.59□□□□□ -2.5
LTN1-206ENST00000486427 PLXNC1O60486 1568 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 USP9YO00507 2555 aaPredicted RBP-0.59□□□□□ -2.5
LTN1-206ENST00000486427 CUBNO60494 3623 aa-0.59□□□□□ -2.5
LTN1-206ENST00000486427 LTN1O94822 1766 aa-0.6□□□□□ -2.5
LTN1-206ENST00000486427 CEP162Q5TB80 1403 aa-0.6□□□□□ -2.51
LTN1-206ENST00000486427 VPS8Q8N3P4 1428 aa-0.6□□□□□ -2.51
LTN1-206ENST00000486427 MT4P47944 62 aa-0.6□□□□□ -2.51
LTN1-206ENST00000486427 PLGLAQ15195 96 aa-0.6□□□□□ -2.51
LTN1-206ENST00000486427 COX6B2Q6YFQ2 88 aa-0.6□□□□□ -2.51
LTN1-206ENST00000486427 NESP48681 1621 aa-0.6□□□□□ -2.51
LTN1-206ENST00000486427 DOT1LQ8TEK3 1739 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 HYDINQ4G0P3 5121 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 VPS13BQ7Z7G8 4022 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 KALRNO60229 2985 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 ZNF831Q5JPB2 1677 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 GYPAP02724 150 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 PEA15Q15121 130 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 TMEM131LA2VDJ0 1609 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 DSPP15924 2871 aaKnown RBP-0.61□□□□□ -2.51
LTN1-206ENST00000486427 USP32Q8NFA0 1604 aa-0.61□□□□□ -2.51
LTN1-206ENST00000486427 ANKRD11Q6UB99 2663 aaPredicted RBP-0.61□□□□□ -2.51
LTN1-206ENST00000486427 NWD1Q149M9 1564 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 BIRC6Q9NR09 4857 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 TRAV21A0A0B4J279 112 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 H3BNG1 76 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 MT1AP04731 61 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 SMIM11AP58511 58 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 PKIAP61925 76 aa-0.62□□□□□ -2.51
LTN1-206ENST00000486427 RPL38P63173 70 aaKnown RBP-0.62□□□□□ -2.51
LTN1-206ENST00000486427 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.62□□□□□ -2.51
LTN1-206ENST00000486427 LAMA1P25391 3075 aa-0.63□□□□□ -2.51
LTN1-206ENST00000486427 GCN1Q92616 2671 aaKnown RBP-0.63□□□□□ -2.51
LTN1-206ENST00000486427 S100A8P05109 93 aa-0.63□□□□□ -2.51
LTN1-206ENST00000486427 RYR1P21817 5038 aa-0.63□□□□□ -2.51
LTN1-206ENST00000486427 CYB5AP00167 134 aa-0.64□□□□□ -2.51
LTN1-206ENST00000486427 WFDC9Q8NEX5 89 aa-0.64□□□□□ -2.51
LTN1-206ENST00000486427 MYO18BQ8IUG5 2567 aa-0.64□□□□□ -2.51
LTN1-206ENST00000486427 ANKRD50Q9ULJ7 1429 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms