RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 TIMM17BO60830 172 aa11.64□□□□□ -0.55
CHRD-215ENST00000485883 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
CHRD-215ENST00000485883 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
CHRD-215ENST00000485883 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
CHRD-215ENST00000485883 SMCR5Q8TEV8 140 aa11.62□□□□□ -0.55
CHRD-215ENST00000485883 S100A1P23297 94 aa11.61□□□□□ -0.55
CHRD-215ENST00000485883 CTAG1AP78358 180 aa11.61□□□□□ -0.55
CHRD-215ENST00000485883 LITAFQ99732 161 aa11.61□□□□□ -0.55
CHRD-215ENST00000485883 B5MCH6 92 aa11.6□□□□□ -0.55
CHRD-215ENST00000485883 EIF4EBP3O60516 100 aaPredicted RBP11.6□□□□□ -0.55
CHRD-215ENST00000485883 AKR1D1P51857 326 aa11.6□□□□□ -0.55
CHRD-215ENST00000485883 TRAV23DV6A0A075B6W5 121 aa11.59□□□□□ -0.55
CHRD-215ENST00000485883 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
CHRD-215ENST00000485883 TTTY13Q9BZ97 58 aa11.59□□□□□ -0.55
CHRD-215ENST00000485883 SPANXCQ9NY87 97 aa11.59□□□□□ -0.55
CHRD-215ENST00000485883 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
CHRD-215ENST00000485883 Q6ZRX8 168 aa11.56□□□□□ -0.56
CHRD-215ENST00000485883 JOSD1Q15040 202 aaPredicted RBP11.55□□□□□ -0.56
CHRD-215ENST00000485883 SPAG11AQ6PDA7 123 aa11.55□□□□□ -0.56
CHRD-215ENST00000485883 ZNF73O43830 326 aaPredicted RBP11.54□□□□□ -0.56
CHRD-215ENST00000485883 ANKRD39Q53RE8 183 aa11.54□□□□□ -0.56
CHRD-215ENST00000485883 SCGB1D4Q6XE38 83 aa11.54□□□□□ -0.56
CHRD-215ENST00000485883 ATOH7Q8N100 152 aa11.54□□□□□ -0.56
CHRD-215ENST00000485883 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
CHRD-215ENST00000485883 HINT1P49773 126 aaPredicted RBP11.52□□□□□ -0.57
CHRD-215ENST00000485883 LINC00483Q53H64 154 aa11.52□□□□□ -0.57
CHRD-215ENST00000485883 GAGE2AQ6NT46 116 aa11.52□□□□□ -0.57
CHRD-215ENST00000485883 Q9BRP9 147 aa11.52□□□□□ -0.57
CHRD-215ENST00000485883 KRTAP9-6A0A140TA67 174 aa11.51□□□□□ -0.57
CHRD-215ENST00000485883 ERC2-IT1O76042 136 aa11.51□□□□□ -0.57
CHRD-215ENST00000485883 S100A2P29034 98 aa11.51□□□□□ -0.57
CHRD-215ENST00000485883 Q8NBF4 154 aa11.51□□□□□ -0.57
CHRD-215ENST00000485883 FP248Q71RG6 208 aaPredicted RBP11.5□□□□□ -0.57
CHRD-215ENST00000485883 LINC00518Q8N0U6 118 aa11.5□□□□□ -0.57
CHRD-215ENST00000485883 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
CHRD-215ENST00000485883 COPS9Q8WXC6 57 aa11.5□□□□□ -0.57
CHRD-215ENST00000485883 SPANXDQ9BXN6 97 aa11.5□□□□□ -0.57
CHRD-215ENST00000485883 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
CHRD-215ENST00000485883 C4orf48Q5BLP8 95 aa11.49□□□□□ -0.57
CHRD-215ENST00000485883 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
CHRD-215ENST00000485883 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
CHRD-215ENST00000485883 S100A6P06703 90 aa11.47□□□□□ -0.57
CHRD-215ENST00000485883 IFITM1P13164 125 aa11.46□□□□□ -0.57
CHRD-215ENST00000485883 Q6ZVH6 145 aa11.45□□□□□ -0.58
CHRD-215ENST00000485883 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
CHRD-215ENST00000485883 KRTAP4-1Q9BYQ7 146 aa11.44□□□□□ -0.58
CHRD-215ENST00000485883 IGLV9-49A0A0B4J1Y8 123 aa11.43□□□□□ -0.58
CHRD-215ENST00000485883 C5orf52A6NGY3 159 aa11.42□□□□□ -0.58
CHRD-215ENST00000485883 MOBPQ13875 183 aa11.42□□□□□ -0.58
CHRD-215ENST00000485883 ASB16-AS1Q495Z4 193 aa11.42□□□□□ -0.58
CHRD-215ENST00000485883 HSBP1L1C9JCN9 74 aa11.41□□□□□ -0.58
CHRD-215ENST00000485883 DHRS4-AS1Q9P1J3 65 aa11.41□□□□□ -0.58
CHRD-215ENST00000485883 SPINK1P00995 79 aa11.4□□□□□ -0.58
CHRD-215ENST00000485883 SSBP3-AS1Q7Z2R9 100 aa11.4□□□□□ -0.58
CHRD-215ENST00000485883 COX7BP24311 80 aa11.39□□□□□ -0.59
CHRD-215ENST00000485883 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
CHRD-215ENST00000485883 ST20-AS1Q8NBB2 130 aa11.39□□□□□ -0.59
CHRD-215ENST00000485883 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
CHRD-215ENST00000485883 ELOF1P60002 83 aaKnown RBP11.37□□□□□ -0.59
CHRD-215ENST00000485883 A6NDN8 102 aa11.36□□□□□ -0.59
CHRD-215ENST00000485883 C9orf153Q5TBE3 101 aa11.36□□□□□ -0.59
CHRD-215ENST00000485883 SLC25A34Q6PIV7 304 aa11.34□□□□□ -0.59
CHRD-215ENST00000485883 Q8N377 158 aa11.34□□□□□ -0.59
CHRD-215ENST00000485883 TRBV7-6A0A0J9YX20 115 aa11.33□□□□□ -0.6
CHRD-215ENST00000485883 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
CHRD-215ENST00000485883 SPRR1BP22528 89 aa11.32□□□□□ -0.6
CHRD-215ENST00000485883 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
CHRD-215ENST00000485883 SEC61BP60468 96 aaKnown RBP11.32□□□□□ -0.6
CHRD-215ENST00000485883 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
CHRD-215ENST00000485883 A0A1B0GWB2 263 aa11.31□□□□□ -0.6
CHRD-215ENST00000485883 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
CHRD-215ENST00000485883 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
CHRD-215ENST00000485883 TAL2Q16559 108 aa11.27□□□□□ -0.61
CHRD-215ENST00000485883 A4D1N5 150 aa11.26□□□□□ -0.61
CHRD-215ENST00000485883 SLC25A20O43772 301 aa11.25□□□□□ -0.61
CHRD-215ENST00000485883 XP32Q5T750 250 aa11.24□□□□□ -0.61
CHRD-215ENST00000485883 DEFB105AQ8NG35 78 aa11.24□□□□□ -0.61
CHRD-215ENST00000485883 SMIM11BQ8TCY0 68 aa11.24□□□□□ -0.61
CHRD-215ENST00000485883 TEX49A0A1B0GTD5 131 aa11.23□□□□□ -0.61
CHRD-215ENST00000485883 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
CHRD-215ENST00000485883 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
CHRD-215ENST00000485883 COX8AP10176 69 aa11.21□□□□□ -0.61
CHRD-215ENST00000485883 VAMP3Q15836 100 aa11.2□□□□□ -0.62
CHRD-215ENST00000485883 Q1RN00 199 aa11.2□□□□□ -0.62
CHRD-215ENST00000485883 FSIP2Q5CZC0 6907 aa11.19□□□□□ -0.62
CHRD-215ENST00000485883 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
CHRD-215ENST00000485883 IGLV5-48A0A075B6I7 105 aa11.18□□□□□ -0.62
CHRD-215ENST00000485883 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
CHRD-215ENST00000485883 DLEU1O43261 78 aa11.17□□□□□ -0.62
CHRD-215ENST00000485883 LIMD2Q9BT23 127 aa11.17□□□□□ -0.62
CHRD-215ENST00000485883 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
CHRD-215ENST00000485883 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.62
CHRD-215ENST00000485883 KRTAP19-2Q3LHN2 52 aa11.14□□□□□ -0.63
CHRD-215ENST00000485883 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
CHRD-215ENST00000485883 C12orf57Q99622 126 aa11.13□□□□□ -0.63
CHRD-215ENST00000485883 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
CHRD-215ENST00000485883 CD164Q04900 197 aa11.12□□□□□ -0.63
CHRD-215ENST00000485883 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
CHRD-215ENST00000485883 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
CHRD-215ENST00000485883 VAMP8Q9BV40 100 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms