RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 MRPL34Q9BQ48 92 aaKnown RBP1.26□□□□□ -2.21
FN1-222ENST00000485567 CACNA1EQ15878 2313 aa1.25□□□□□ -2.21
FN1-222ENST00000485567 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.25□□□□□ -2.213e-16■■■□□ 16.5
FN1-222ENST00000485567 PLNP26678 52 aa1.25□□□□□ -2.21
FN1-222ENST00000485567 SERF2P84101 59 aa1.25□□□□□ -2.21
FN1-222ENST00000485567 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
FN1-222ENST00000485567 C3P01024 1663 aa1.25□□□□□ -2.21
FN1-222ENST00000485567 FAM208BQ5VWN6 2430 aa1.25□□□□□ -2.21
FN1-222ENST00000485567 NAV3Q8IVL0 2385 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 SMIM27A0A1W2PRY6 76 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 COX6A2Q02221 97 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 USMG5Q96IX5 58 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 PRO3102Q9H379 93 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 CDKN2A-AS1Q9UH64 79 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 ABCC8Q09428 1581 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
FN1-222ENST00000485567 KIAA0586Q9BVV6 1533 aa1.24□□□□□ -2.21
FN1-222ENST00000485567 LOC730098B7Z3J9 87 aa1.23□□□□□ -2.21
FN1-222ENST00000485567 MRPL33O75394 65 aaKnown RBP1.23□□□□□ -2.21
FN1-222ENST00000485567 NDUFA3O95167 84 aa1.23□□□□□ -2.21
FN1-222ENST00000485567 SPINK9Q5DT21 86 aa1.23□□□□□ -2.21
FN1-222ENST00000485567 LELP1Q5T871 98 aa1.23□□□□□ -2.21
FN1-222ENST00000485567 CNFNQ9BYD5 112 aa1.23□□□□□ -2.21
FN1-222ENST00000485567 NRXN3Q9Y4C0 1643 aa1.22□□□□□ -2.21
FN1-222ENST00000485567 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
FN1-222ENST00000485567 PRO0255Q9UI72 69 aa1.22□□□□□ -2.21
FN1-222ENST00000485567 TIMM8BQ9Y5J9 83 aaPredicted RBP1.22□□□□□ -2.21
FN1-222ENST00000485567 IQGAP2Q13576 1575 aa1.21□□□□□ -2.22
FN1-222ENST00000485567 A0A0D9SG42 100 aa1.21□□□□□ -2.22
FN1-222ENST00000485567 SPINK4O60575 86 aa1.2□□□□□ -2.22
FN1-222ENST00000485567 Q8IZM0 81 aa1.2□□□□□ -2.22
FN1-222ENST00000485567 ANKRD36CQ5JPF3 1778 aa1.2□□□□□ -2.22
FN1-222ENST00000485567 LINC01546A6NGU7 62 aa1.19□□□□□ -2.22
FN1-222ENST00000485567 LINC00158P58513 81 aa1.19□□□□□ -2.22
FN1-222ENST00000485567 TNRC6CQ9HCJ0 1690 aaKnown RBP1.19□□□□□ -2.22
FN1-222ENST00000485567 DDX60LQ5H9U9 1706 aaKnown RBP1.18□□□□□ -2.22
FN1-222ENST00000485567 H0YGX0 51 aa1.18□□□□□ -2.22
FN1-222ENST00000485567 SPRR1AP35321 89 aa1.18□□□□□ -2.22
FN1-222ENST00000485567 PIEZO2Q9H5I5 2752 aa1.17□□□□□ -2.22
FN1-222ENST00000485567 CNOT1A5YKK6 2376 aaKnown RBP1.17□□□□□ -2.22
FN1-222ENST00000485567 H0YAA0 97 aa1.17□□□□□ -2.22
FN1-222ENST00000485567 CCL22O00626 93 aa1.17□□□□□ -2.22
FN1-222ENST00000485567 COX6B2Q6YFQ2 88 aa1.17□□□□□ -2.22
FN1-222ENST00000485567 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
FN1-222ENST00000485567 DEPDC5O75140 1603 aa1.16□□□□□ -2.22
FN1-222ENST00000485567 COL6A6A6NMZ7 2263 aa1.16□□□□□ -2.22
FN1-222ENST00000485567 PRB3Q04118 309 aaPredicted RBP1.16□□□□□ -2.22
FN1-222ENST00000485567 ROS1P08922 2347 aa1.16□□□□□ -2.22
FN1-222ENST00000485567 FAM208AQ9UK61 1670 aaKnown RBP1.16□□□□□ -2.22
FN1-222ENST00000485567 H1FX-AS1Q4G0G2 97 aa1.15□□□□□ -2.23
FN1-222ENST00000485567 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
FN1-222ENST00000485567 SRCAPQ6ZRS2 3230 aa1.14□□□□□ -2.23
FN1-222ENST00000485567 FBN3Q75N90 2809 aa1.14□□□□□ -2.23
FN1-222ENST00000485567 SPRR1BP22528 89 aa1.14□□□□□ -2.23
FN1-222ENST00000485567 LINC00308Q8TCZ7 52 aa1.14□□□□□ -2.23
FN1-222ENST00000485567 TRPM2O94759 1503 aa1.14□□□□□ -2.23
FN1-222ENST00000485567 DOPEY2Q9Y3R5 2298 aa1.13□□□□□ -2.23
FN1-222ENST00000485567 ASH1LQ9NR48 2969 aaKnown RBP1.13□□□□□ -2.23
FN1-222ENST00000485567 LYNX1G3V0Z9 82 aa1.13□□□□□ -2.23
FN1-222ENST00000485567 Q5VSD8 79 aa1.13□□□□□ -2.23
FN1-222ENST00000485567 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
FN1-222ENST00000485567 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
FN1-222ENST00000485567 TOGARAM1Q9Y4F4 1720 aa1.12□□□□□ -2.23
FN1-222ENST00000485567 TFF3Q07654 80 aa1.12□□□□□ -2.23
FN1-222ENST00000485567 WFDC13Q8IUB5 93 aa1.12□□□□□ -2.23
FN1-222ENST00000485567 MROH2BQ7Z745 1585 aa1.12□□□□□ -2.23
FN1-222ENST00000485567 PLCE1Q9P212 2302 aa1.11□□□□□ -2.23
FN1-222ENST00000485567 KLK9Q2XQG4 91 aa1.11□□□□□ -2.23
FN1-222ENST00000485567 MINOS1Q5TGZ0 78 aa1.11□□□□□ -2.23
FN1-222ENST00000485567 TMEM167BQ9NRX6 74 aa1.11□□□□□ -2.23
FN1-222ENST00000485567 C2CD3Q4AC94 2353 aa1.1□□□□□ -2.23
FN1-222ENST00000485567 USF3Q68DE3 2245 aa1.1□□□□□ -2.23
FN1-222ENST00000485567 ALMS1Q8TCU4 4167 aa1.1□□□□□ -2.23
FN1-222ENST00000485567 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
FN1-222ENST00000485567 IQGAP1P46940 1657 aa1.09□□□□□ -2.24
FN1-222ENST00000485567 C4AP0C0L4 1744 aa1.09□□□□□ -2.24
FN1-222ENST00000485567 C4BP0C0L5 1744 aa1.09□□□□□ -2.24
FN1-222ENST00000485567 PTPRQQ9UMZ3 2332 aa1.09□□□□□ -2.24
FN1-222ENST00000485567 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.24
FN1-222ENST00000485567 BPTFQ12830 3046 aa1.08□□□□□ -2.24
FN1-222ENST00000485567 DEFB130BP0DP73 79 aa1.08□□□□□ -2.24
FN1-222ENST00000485567 DEFB130AP0DP74 79 aa1.08□□□□□ -2.24
FN1-222ENST00000485567 IAPPP10997 89 aa1.08□□□□□ -2.24
FN1-222ENST00000485567 C6orf48Q9UBA6 75 aa1.08□□□□□ -2.24
FN1-222ENST00000485567 KIF21BO75037 1637 aa1.07□□□□□ -2.24
FN1-222ENST00000485567 SPTBN2O15020 2390 aa1.07□□□□□ -2.24
FN1-222ENST00000485567 NFAT5O94916 1531 aa1.07□□□□□ -2.24
FN1-222ENST00000485567 ATP7AQ04656 1500 aa1.07□□□□□ -2.24
FN1-222ENST00000485567 CACNA1HO95180 2353 aa1.07□□□□□ -2.24
FN1-222ENST00000485567 LMO7Q8WWI1 1683 aa1.07□□□□□ -2.24
FN1-222ENST00000485567 TENM1Q9UKZ4 2725 aa1.06□□□□□ -2.24
FN1-222ENST00000485567 DDX60Q8IY21 1712 aaKnown RBP1.06□□□□□ -2.24
FN1-222ENST00000485567 RPS27P42677 84 aaKnown RBP1.05□□□□□ -2.24
FN1-222ENST00000485567 RPS27LQ71UM5 84 aaKnown RBP1.05□□□□□ -2.24
FN1-222ENST00000485567 SPTBN1Q01082 2364 aaKnown RBP1.05□□□□□ -2.24
FN1-222ENST00000485567 MEGF8Q7Z7M0 2845 aa1.03□□□□□ -2.24
FN1-222ENST00000485567 SNRPGP62308 76 aaKnown RBP1.03□□□□□ -2.24
FN1-222ENST00000485567 SMIM2Q9BVW6 85 aa1.03□□□□□ -2.24
FN1-222ENST00000485567 SAMD9LQ8IVG5 1584 aa1.03□□□□□ -2.24
FN1-222ENST00000485567 CDC42BPAQ5VT25 1732 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms