RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
CTSA-207ENST00000484855 PKIGQ9Y2B9 76 aa10.67□□□□□ -0.7
CTSA-207ENST00000484855 IGLV1-50A0A075B6I6 118 aa10.67□□□□□ -0.7
CTSA-207ENST00000484855 A0A087WTM6 91 aa10.66□□□□□ -0.7
CTSA-207ENST00000484855 LINC00476Q8WZB0 136 aa10.66□□□□□ -0.7
CTSA-207ENST00000484855 TMEM256-PLSCR3K7ERE1 68 aa10.66□□□□□ -0.7
CTSA-207ENST00000484855 PRYO14603 147 aa10.66□□□□□ -0.7
CTSA-207ENST00000484855 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.7
CTSA-207ENST00000484855 Q6ZQY7 126 aa10.65□□□□□ -0.71
CTSA-207ENST00000484855 DNAH17Q9UFH2 4485 aa10.64□□□□□ -0.71
CTSA-207ENST00000484855 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
CTSA-207ENST00000484855 INAFM2P0DMQ5 153 aa10.64□□□□□ -0.71
CTSA-207ENST00000484855 C1orf134Q5TEV5 83 aa10.64□□□□□ -0.71
CTSA-207ENST00000484855 HECTD4Q9Y4D8 3996 aa10.63□□□□□ -0.71
CTSA-207ENST00000484855 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
CTSA-207ENST00000484855 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
CTSA-207ENST00000484855 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.62□□□□□ -0.71
CTSA-207ENST00000484855 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
CTSA-207ENST00000484855 OBSCN-AS1Q96MR7 158 aa10.61□□□□□ -0.71
CTSA-207ENST00000484855 SPRR1AP35321 89 aa10.6□□□□□ -0.71
CTSA-207ENST00000484855 CDIP1Q9H305 208 aa10.6□□□□□ -0.71
CTSA-207ENST00000484855 A0A1B0GV72 72 aa10.6□□□□□ -0.71
CTSA-207ENST00000484855 ETDCA0A1B0GVM5 59 aa10.6□□□□□ -0.71
CTSA-207ENST00000484855 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
CTSA-207ENST00000484855 KRTAP4-16G5E9R7 235 aaPredicted RBP10.59□□□□□ -0.71
CTSA-207ENST00000484855 H3BQ85 93 aa10.59□□□□□ -0.71
CTSA-207ENST00000484855 C14orf132Q9NPU4 83 aa10.59□□□□□ -0.71
CTSA-207ENST00000484855 Q6ZRX8 168 aa10.58□□□□□ -0.72
CTSA-207ENST00000484855 FAM240AA0A1B0GVK7 77 aa10.58□□□□□ -0.72
CTSA-207ENST00000484855 B5MCH6 92 aa10.58□□□□□ -0.72
CTSA-207ENST00000484855 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.72
CTSA-207ENST00000484855 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
CTSA-207ENST00000484855 GHRHP01286 108 aa10.57□□□□□ -0.72
CTSA-207ENST00000484855 FRAS1Q86XX4 4008 aa10.57□□□□□ -0.72
CTSA-207ENST00000484855 RTL8CO15255 209 aa10.56□□□□□ -0.72
CTSA-207ENST00000484855 DHRS4-AS1Q9P1J3 65 aa10.55□□□□□ -0.72
CTSA-207ENST00000484855 LAMTOR3Q9UHA4 124 aa10.55□□□□□ -0.72
CTSA-207ENST00000484855 FUSP35637 526 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTSA-207ENST00000484855 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
CTSA-207ENST00000484855 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
CTSA-207ENST00000484855 PANO1I0J062 215 aa10.54□□□□□ -0.72
CTSA-207ENST00000484855 SIGMAR1Q99720 223 aa10.53□□□□□ -0.72
CTSA-207ENST00000484855 Q9BRP9 147 aa10.53□□□□□ -0.72
CTSA-207ENST00000484855 ACYP1P07311 99 aa10.53□□□□□ -0.72
CTSA-207ENST00000484855 UBE2BP63146 152 aa10.53□□□□□ -0.72
CTSA-207ENST00000484855 SPACA4Q8TDM5 124 aa10.52□□□□□ -0.72
CTSA-207ENST00000484855 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.73
CTSA-207ENST00000484855 DPH3Q96FX2 82 aa10.52□□□□□ -0.73
CTSA-207ENST00000484855 IGLV5-52A0A0A0MRZ9 124 aa10.51□□□□□ -0.73
CTSA-207ENST00000484855 XGP55808 180 aa10.51□□□□□ -0.73
CTSA-207ENST00000484855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.51□□□□□ -0.73
CTSA-207ENST00000484855 TNP2Q05952 138 aa10.5□□□□□ -0.73
CTSA-207ENST00000484855 RBM3P98179 157 aaKnown RBP10.5□□□□□ -0.73
CTSA-207ENST00000484855 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
CTSA-207ENST00000484855 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
CTSA-207ENST00000484855 MT-ATP8P03928 68 aa10.47□□□□□ -0.73
CTSA-207ENST00000484855 DEFB105AQ8NG35 78 aa10.47□□□□□ -0.73
CTSA-207ENST00000484855 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
CTSA-207ENST00000484855 CCKP06307 115 aa10.46□□□□□ -0.73
CTSA-207ENST00000484855 NDUFV3P56181 108 aaKnown RBP10.46□□□□□ -0.73
CTSA-207ENST00000484855 PRLHP81277 87 aa10.46□□□□□ -0.74
CTSA-207ENST00000484855 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
CTSA-207ENST00000484855 ERC2-IT1O76042 136 aa10.45□□□□□ -0.74
CTSA-207ENST00000484855 DSCR8Q96T75 97 aa10.45□□□□□ -0.74
CTSA-207ENST00000484855 LOC110117498A0A087WWA1 95 aa10.44□□□□□ -0.74
CTSA-207ENST00000484855 LINC01547P58512 204 aaPredicted RBP10.44□□□□□ -0.74
CTSA-207ENST00000484855 Q8N377 158 aa10.44□□□□□ -0.74
CTSA-207ENST00000484855 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
CTSA-207ENST00000484855 EPM2AB3EWF7 344 aa10.43□□□□□ -0.74
CTSA-207ENST00000484855 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
CTSA-207ENST00000484855 Q6ZQT0 140 aa10.43□□□□□ -0.74
CTSA-207ENST00000484855 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
CTSA-207ENST00000484855 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
CTSA-207ENST00000484855 FAT2Q9NYQ8 4349 aa10.42□□□□□ -0.74
CTSA-207ENST00000484855 IGLV5-48A0A075B6I7 105 aa10.41□□□□□ -0.74
CTSA-207ENST00000484855 PDE6GP18545 87 aa10.41□□□□□ -0.74
CTSA-207ENST00000484855 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
CTSA-207ENST00000484855 TRBV7-4A0A0J9YYF1 115 aa10.39□□□□□ -0.75
CTSA-207ENST00000484855 LINC00846Q9NV44 126 aa10.39□□□□□ -0.75
CTSA-207ENST00000484855 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
CTSA-207ENST00000484855 H0Y9J4 135 aa10.38□□□□□ -0.75
CTSA-207ENST00000484855 UBE2AP49459 152 aa10.38□□□□□ -0.75
CTSA-207ENST00000484855 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
CTSA-207ENST00000484855 BCE1O60756 84 aa10.38□□□□□ -0.75
CTSA-207ENST00000484855 C3orf22Q8N5N4 141 aa10.38□□□□□ -0.75
CTSA-207ENST00000484855 PKD1P98161 4303 aa10.38□□□□□ -0.75
CTSA-207ENST00000484855 LINC00643Q86TS7 51 aa10.37□□□□□ -0.75
CTSA-207ENST00000484855 SCGB1A1P11684 91 aa10.33□□□□□ -0.76
CTSA-207ENST00000484855 C21orf62-AS1Q17RA5 79 aa10.32□□□□□ -0.76
CTSA-207ENST00000484855 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
CTSA-207ENST00000484855 PCP4P48539 62 aa10.31□□□□□ -0.76
CTSA-207ENST00000484855 LCE6AA0A183 80 aa10.3□□□□□ -0.76
CTSA-207ENST00000484855 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
CTSA-207ENST00000484855 UBL5Q9BZL1 73 aa10.29□□□□□ -0.76
CTSA-207ENST00000484855 PSORS1C2Q9UIG4 136 aa10.29□□□□□ -0.76
CTSA-207ENST00000484855 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
CTSA-207ENST00000484855 F8WEM9 126 aa10.28□□□□□ -0.76
CTSA-207ENST00000484855 Q6Q795 121 aa10.28□□□□□ -0.76
CTSA-207ENST00000484855 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
CTSA-207ENST00000484855 C1orf137Q5JT78 98 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms