RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 A0A087WVE0 104 aa9.45□□□□□ -0.9
CHD3-211ENST00000481999 Q6ZQY7 126 aa9.45□□□□□ -0.9
CHD3-211ENST00000481999 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
CHD3-211ENST00000481999 Q6ZQT0 140 aa9.45□□□□□ -0.9
CHD3-211ENST00000481999 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
CHD3-211ENST00000481999 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
CHD3-211ENST00000481999 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
CHD3-211ENST00000481999 GHRHP01286 108 aa9.43□□□□□ -0.9
CHD3-211ENST00000481999 VPREB1P12018 145 aa9.43□□□□□ -0.9
CHD3-211ENST00000481999 COX7BP24311 80 aa9.43□□□□□ -0.9
CHD3-211ENST00000481999 CRYGAP11844 174 aa9.42□□□□□ -0.9
CHD3-211ENST00000481999 PDE6GP18545 87 aa9.42□□□□□ -0.9
CHD3-211ENST00000481999 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
CHD3-211ENST00000481999 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.42□□□□□ -0.9
CHD3-211ENST00000481999 DSCR8Q96T75 97 aa9.42□□□□□ -0.9
CHD3-211ENST00000481999 UPK3BQ9BT76 320 aa9.42□□□□□ -0.9
CHD3-211ENST00000481999 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
CHD3-211ENST00000481999 ELOF1P60002 83 aaKnown RBP9.41□□□□□ -0.9
CHD3-211ENST00000481999 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
CHD3-211ENST00000481999 M0R378 163 aa9.41□□□□□ -0.9
CHD3-211ENST00000481999 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
CHD3-211ENST00000481999 F8WDY8 70 aa9.39□□□□□ -0.91
CHD3-211ENST00000481999 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
CHD3-211ENST00000481999 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
CHD3-211ENST00000481999 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
CHD3-211ENST00000481999 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
CHD3-211ENST00000481999 M0R2N4 97 aa9.34□□□□□ -0.91
CHD3-211ENST00000481999 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
CHD3-211ENST00000481999 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
CHD3-211ENST00000481999 Q6ZVQ6 151 aa9.34□□□□□ -0.91
CHD3-211ENST00000481999 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
CHD3-211ENST00000481999 VPS13DQ5THJ4 4388 aa9.33□□□□□ -0.92
CHD3-211ENST00000481999 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
CHD3-211ENST00000481999 PSCAO43653 123 aa9.32□□□□□ -0.92
CHD3-211ENST00000481999 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
CHD3-211ENST00000481999 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
CHD3-211ENST00000481999 HAMPP81172 84 aa9.31□□□□□ -0.92
CHD3-211ENST00000481999 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
CHD3-211ENST00000481999 RMI2Q96E14 147 aa9.3□□□□□ -0.92
CHD3-211ENST00000481999 SRRM2Q9UQ35 2752 aaKnown RBP9.3□□□□□ -0.92
CHD3-211ENST00000481999 CXCL6P80162 114 aa9.3□□□□□ -0.92
CHD3-211ENST00000481999 NKAPP1Q8N9T2 125 aa9.29□□□□□ -0.92
CHD3-211ENST00000481999 NUPR2A6NF83 97 aa9.28□□□□□ -0.92
CHD3-211ENST00000481999 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
CHD3-211ENST00000481999 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
CHD3-211ENST00000481999 KCNQ1DNQ9H478 68 aa9.28□□□□□ -0.92
CHD3-211ENST00000481999 BCE1O60756 84 aa9.28□□□□□ -0.92
CHD3-211ENST00000481999 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
CHD3-211ENST00000481999 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
CHD3-211ENST00000481999 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
CHD3-211ENST00000481999 TMEM258P61165 79 aa9.27□□□□□ -0.93
CHD3-211ENST00000481999 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
CHD3-211ENST00000481999 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
CHD3-211ENST00000481999 A0A096LNI7 61 aa9.24□□□□□ -0.93
CHD3-211ENST00000481999 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
CHD3-211ENST00000481999 J3KT08 172 aa9.24□□□□□ -0.93
CHD3-211ENST00000481999 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
CHD3-211ENST00000481999 C5orf47Q569G3 176 aa9.23□□□□□ -0.93
CHD3-211ENST00000481999 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
CHD3-211ENST00000481999 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
CHD3-211ENST00000481999 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
CHD3-211ENST00000481999 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
CHD3-211ENST00000481999 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
CHD3-211ENST00000481999 IGLV5-37A0A075B6J1 123 aa9.2□□□□□ -0.94
CHD3-211ENST00000481999 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
CHD3-211ENST00000481999 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
CHD3-211ENST00000481999 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
CHD3-211ENST00000481999 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
CHD3-211ENST00000481999 A0A1W2PNN7 141 aa9.19□□□□□ -0.94
CHD3-211ENST00000481999 PRYO14603 147 aa9.19□□□□□ -0.94
CHD3-211ENST00000481999 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
CHD3-211ENST00000481999 Q6ZRX8 168 aa9.18□□□□□ -0.94
CHD3-211ENST00000481999 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
CHD3-211ENST00000481999 Q8N377 158 aa9.18□□□□□ -0.94
CHD3-211ENST00000481999 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
CHD3-211ENST00000481999 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
CHD3-211ENST00000481999 FRAS1Q86XX4 4008 aa9.17□□□□□ -0.94
CHD3-211ENST00000481999 PANO1I0J062 215 aa9.16□□□□□ -0.94
CHD3-211ENST00000481999 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
CHD3-211ENST00000481999 MRPL55Q7Z7F7 128 aaKnown RBP9.16□□□□□ -0.94
CHD3-211ENST00000481999 DPH3Q96FX2 82 aa9.16□□□□□ -0.94
CHD3-211ENST00000481999 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
CHD3-211ENST00000481999 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
CHD3-211ENST00000481999 DNAH6Q9C0G6 4158 aa9.16□□□□□ -0.94
CHD3-211ENST00000481999 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.94
CHD3-211ENST00000481999 SPRR1AP35321 89 aa9.15□□□□□ -0.94
CHD3-211ENST00000481999 NREPQ16612 68 aa9.15□□□□□ -0.94
CHD3-211ENST00000481999 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
CHD3-211ENST00000481999 Q9BRP9 147 aa9.14□□□□□ -0.95
CHD3-211ENST00000481999 C16orf90A8MZG2 172 aa9.13□□□□□ -0.95
CHD3-211ENST00000481999 A0A1B0GW54 56 aa9.12□□□□□ -0.95
CHD3-211ENST00000481999 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
CHD3-211ENST00000481999 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
CHD3-211ENST00000481999 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
CHD3-211ENST00000481999 C3orf84H3BNL1 204 aa9.11□□□□□ -0.95
CHD3-211ENST00000481999 LY6G6CO95867 125 aa9.1□□□□□ -0.95
CHD3-211ENST00000481999 PHF5AQ7RTV0 110 aaKnown RBP9.1□□□□□ -0.95
CHD3-211ENST00000481999 BPY2O14599 106 aa9.1□□□□□ -0.95
CHD3-211ENST00000481999 IGKV4-1P06312 121 aa9.09□□□□□ -0.95
CHD3-211ENST00000481999 PRLHP81277 87 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms