RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 VAMP3Q15836 100 aa5.09□□□□□ -1.59
GTF3C2-210ENST00000480989 BOD1L2Q8IYS8 172 aa5.09□□□□□ -1.59
GTF3C2-210ENST00000480989 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
GTF3C2-210ENST00000480989 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
GTF3C2-210ENST00000480989 A0A1B0GV90 55 aa5.07□□□□□ -1.6
GTF3C2-210ENST00000480989 ETDCA0A1B0GVM5 59 aa5.07□□□□□ -1.6
GTF3C2-210ENST00000480989 SFTA2Q6UW10 78 aa5.07□□□□□ -1.6
GTF3C2-210ENST00000480989 TRAPPC1Q9Y5R8 145 aa5.07□□□□□ -1.6
GTF3C2-210ENST00000480989 A0A1B0GV72 72 aa5.06□□□□□ -1.6
GTF3C2-210ENST00000480989 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
GTF3C2-210ENST00000480989 SSBP3-AS1Q7Z2R9 100 aa5.06□□□□□ -1.6
GTF3C2-210ENST00000480989 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
GTF3C2-210ENST00000480989 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
GTF3C2-210ENST00000480989 SLC25A20O43772 301 aa5.05□□□□□ -1.6
GTF3C2-210ENST00000480989 SEC61GP60059 68 aa5.05□□□□□ -1.6
GTF3C2-210ENST00000480989 PCOTHQ58A44 107 aa5.05□□□□□ -1.6
GTF3C2-210ENST00000480989 LOC107984156A0A0G2JMH3 177 aa5.04□□□□□ -1.6
GTF3C2-210ENST00000480989 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
GTF3C2-210ENST00000480989 Q6ZRX8 168 aa5.04□□□□□ -1.6
GTF3C2-210ENST00000480989 ARL17AQ8IVW1 177 aa5.04□□□□□ -1.6
GTF3C2-210ENST00000480989 FAM19A2Q8N3H0 131 aa5.04□□□□□ -1.6
GTF3C2-210ENST00000480989 ST20-AS1Q8NBB2 130 aa5.04□□□□□ -1.6
GTF3C2-210ENST00000480989 TRAV12-1A0A0B4J245 112 aa5.03□□□□□ -1.6
GTF3C2-210ENST00000480989 NDUFA12Q9UI09 145 aa5.03□□□□□ -1.6
GTF3C2-210ENST00000480989 DDTP30046 118 aa5.02□□□□□ -1.61
GTF3C2-210ENST00000480989 HERV-K104P63124 156 aa5.02□□□□□ -1.61
GTF3C2-210ENST00000480989 SOSTDC1Q6X4U4 206 aa5.02□□□□□ -1.61
GTF3C2-210ENST00000480989 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
GTF3C2-210ENST00000480989 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
GTF3C2-210ENST00000480989 IGLV8-61A0A075B6I0 122 aa5.01□□□□□ -1.61
GTF3C2-210ENST00000480989 TRBV10-2A0A0K0K1G8 114 aa5.01□□□□□ -1.61
GTF3C2-210ENST00000480989 IGLV6-57P01721 117 aa5.01□□□□□ -1.61
GTF3C2-210ENST00000480989 SNRPEP62304 92 aaKnown RBP5.01□□□□□ -1.61
GTF3C2-210ENST00000480989 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
GTF3C2-210ENST00000480989 C9orf92A6NGG3 77 aa5□□□□□ -1.61
GTF3C2-210ENST00000480989 SCGB1A1P11684 91 aa5□□□□□ -1.61
GTF3C2-210ENST00000480989 C9orf153Q5TBE3 101 aa5□□□□□ -1.61
GTF3C2-210ENST00000480989 MTURNQ8N3F0 131 aa5□□□□□ -1.61
GTF3C2-210ENST00000480989 AKR1D1P51857 326 aa4.99□□□□□ -1.61
GTF3C2-210ENST00000480989 LINC00310P59036 64 aa4.99□□□□□ -1.61
GTF3C2-210ENST00000480989 MYMXA0A1B0GTQ4 84 aa4.98□□□□□ -1.61
GTF3C2-210ENST00000480989 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
GTF3C2-210ENST00000480989 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
GTF3C2-210ENST00000480989 HRCT1Q6UXD1 115 aa4.98□□□□□ -1.61
GTF3C2-210ENST00000480989 SPANXB1Q9NS25 103 aaPredicted RBP4.98□□□□□ -1.61
GTF3C2-210ENST00000480989 TRAV23DV6A0A075B6W5 121 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 LEPROTO15243 131 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 DLEU1O43261 78 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 HSBP1O75506 76 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 SPRR1BP22528 89 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 ADAMTSL4-AS1Q5T5F5 129 aa4.97□□□□□ -1.61
GTF3C2-210ENST00000480989 ZNF73O43830 326 aaPredicted RBP4.96□□□□□ -1.62
GTF3C2-210ENST00000480989 NDUFC2O95298 119 aa4.96□□□□□ -1.62
GTF3C2-210ENST00000480989 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
GTF3C2-210ENST00000480989 J3QQQ9 107 aa4.95□□□□□ -1.62
GTF3C2-210ENST00000480989 TRGC2P03986 189 aa4.95□□□□□ -1.62
GTF3C2-210ENST00000480989 NPC2P61916 151 aa4.95□□□□□ -1.62
GTF3C2-210ENST00000480989 MAP1LC3CQ9BXW4 147 aa4.95□□□□□ -1.62
GTF3C2-210ENST00000480989 USH2AO75445 5202 aa4.94□□□□□ -1.62
GTF3C2-210ENST00000480989 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
GTF3C2-210ENST00000480989 C14orf144Q96I85 54 aa4.94□□□□□ -1.62
GTF3C2-210ENST00000480989 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
GTF3C2-210ENST00000480989 PMCHL2Q9BQD1 86 aa4.94□□□□□ -1.62
GTF3C2-210ENST00000480989 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
GTF3C2-210ENST00000480989 UBE2V1Q13404 147 aa4.93□□□□□ -1.62
GTF3C2-210ENST00000480989 S100A7L2Q5SY68 101 aa4.93□□□□□ -1.62
GTF3C2-210ENST00000480989 LITAFQ99732 161 aa4.93□□□□□ -1.62
GTF3C2-210ENST00000480989 A0A0J9YXY3 114 aa4.92□□□□□ -1.62
GTF3C2-210ENST00000480989 COLCA2A8K830 154 aa4.92□□□□□ -1.62
GTF3C2-210ENST00000480989 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
GTF3C2-210ENST00000480989 JOSD1Q15040 202 aaPredicted RBP4.92□□□□□ -1.62
GTF3C2-210ENST00000480989 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
GTF3C2-210ENST00000480989 H7C2G1 150 aa4.91□□□□□ -1.62
GTF3C2-210ENST00000480989 SERF1AO75920 110 aa4.91□□□□□ -1.62
GTF3C2-210ENST00000480989 RPL37P61927 97 aaKnown RBP4.91□□□□□ -1.62
GTF3C2-210ENST00000480989 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
GTF3C2-210ENST00000480989 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
GTF3C2-210ENST00000480989 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
GTF3C2-210ENST00000480989 PLNP26678 52 aa4.9□□□□□ -1.63
GTF3C2-210ENST00000480989 NMUP48645 174 aa4.9□□□□□ -1.63
GTF3C2-210ENST00000480989 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
GTF3C2-210ENST00000480989 MIEN1Q9BRT3 115 aa4.9□□□□□ -1.63
GTF3C2-210ENST00000480989 M0R2T5 61 aa4.89□□□□□ -1.63
GTF3C2-210ENST00000480989 DPM2O94777 84 aa4.89□□□□□ -1.63
GTF3C2-210ENST00000480989 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
GTF3C2-210ENST00000480989 Q1RN00 199 aa4.89□□□□□ -1.63
GTF3C2-210ENST00000480989 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 IGKCP01834 107 aa4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 ELOF1P60002 83 aaKnown RBP4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 HERVK_113P61574 105 aa4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 CD164Q04900 197 aa4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 Q5XG85 94 aa4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 LINC00308Q8TCZ7 52 aa4.88□□□□□ -1.63
GTF3C2-210ENST00000480989 E9PLD3 99 aa4.87□□□□□ -1.63
GTF3C2-210ENST00000480989 FABP4P15090 132 aa4.87□□□□□ -1.63
GTF3C2-210ENST00000480989 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
GTF3C2-210ENST00000480989 LAMTOR3Q9UHA4 124 aa4.87□□□□□ -1.63
GTF3C2-210ENST00000480989 HIST1H2BKO60814 126 aa4.86□□□□□ -1.63
GTF3C2-210ENST00000480989 HIST1H2BJP06899 126 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms