RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
CCM2-213ENST00000480658 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
CCM2-213ENST00000480658 TRAV23DV6A0A075B6W5 121 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 B5MCH6 92 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 TIMM17BO60830 172 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
CCM2-213ENST00000480658 PET117Q6UWS5 81 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 CDIP1Q9H305 208 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
CCM2-213ENST00000480658 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
CCM2-213ENST00000480658 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
CCM2-213ENST00000480658 SLC25A34Q6PIV7 304 aa6.62□□□□□ -1.35
CCM2-213ENST00000480658 DAND5Q8N907 189 aa6.62□□□□□ -1.35
CCM2-213ENST00000480658 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
CCM2-213ENST00000480658 C20orf202A1L168 122 aa6.61□□□□□ -1.35
CCM2-213ENST00000480658 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
CCM2-213ENST00000480658 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
CCM2-213ENST00000480658 LINC01545Q5VT33 79 aa6.61□□□□□ -1.35
CCM2-213ENST00000480658 SSBP3-AS1Q7Z2R9 100 aa6.61□□□□□ -1.35
CCM2-213ENST00000480658 C3orf22Q8N5N4 141 aa6.61□□□□□ -1.35
CCM2-213ENST00000480658 LPAP08519 4548 aa6.6□□□□□ -1.35
CCM2-213ENST00000480658 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
CCM2-213ENST00000480658 Q8NBF4 154 aa6.6□□□□□ -1.35
CCM2-213ENST00000480658 GAGE2AQ6NT46 116 aa6.59□□□□□ -1.35
CCM2-213ENST00000480658 RETNLBQ9BQ08 111 aa6.58□□□□□ -1.36
CCM2-213ENST00000480658 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
CCM2-213ENST00000480658 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
CCM2-213ENST00000480658 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
CCM2-213ENST00000480658 ZNF815PA8K554 130 aa6.57□□□□□ -1.36
CCM2-213ENST00000480658 SCGB1D4Q6XE38 83 aa6.56□□□□□ -1.36
CCM2-213ENST00000480658 Q6ZVH6 145 aa6.56□□□□□ -1.36
CCM2-213ENST00000480658 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
CCM2-213ENST00000480658 Q9BRP9 147 aa6.56□□□□□ -1.36
CCM2-213ENST00000480658 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
CCM2-213ENST00000480658 SLC25A20O43772 301 aa6.55□□□□□ -1.36
CCM2-213ENST00000480658 MOBPQ13875 183 aa6.55□□□□□ -1.36
CCM2-213ENST00000480658 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
CCM2-213ENST00000480658 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
CCM2-213ENST00000480658 IFITM1P13164 125 aa6.54□□□□□ -1.36
CCM2-213ENST00000480658 NPC2P61916 151 aa6.54□□□□□ -1.36
CCM2-213ENST00000480658 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
CCM2-213ENST00000480658 C9orf153Q5TBE3 101 aa6.54□□□□□ -1.36
CCM2-213ENST00000480658 EIF4EBP3O60516 100 aaPredicted RBP6.53□□□□□ -1.36
CCM2-213ENST00000480658 S100A6P06703 90 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 KRTDAPP60985 99 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 HIST3H2BBQ8N257 126 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 LITAFQ99732 161 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
CCM2-213ENST00000480658 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
CCM2-213ENST00000480658 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
CCM2-213ENST00000480658 ELOF1P60002 83 aaKnown RBP6.51□□□□□ -1.37
CCM2-213ENST00000480658 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
CCM2-213ENST00000480658 A4D1N5 150 aa6.5□□□□□ -1.37
CCM2-213ENST00000480658 SPRR1BP22528 89 aa6.5□□□□□ -1.37
CCM2-213ENST00000480658 HIST1H2BLQ99880 126 aa6.5□□□□□ -1.37
CCM2-213ENST00000480658 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
CCM2-213ENST00000480658 MUC2Q02817 5179 aa6.49□□□□□ -1.37
CCM2-213ENST00000480658 A0A1B0GWB2 263 aa6.49□□□□□ -1.37
CCM2-213ENST00000480658 COX7BP24311 80 aa6.49□□□□□ -1.37
CCM2-213ENST00000480658 S100A2P29034 98 aa6.49□□□□□ -1.37
CCM2-213ENST00000480658 Q8N377 158 aa6.49□□□□□ -1.37
CCM2-213ENST00000480658 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
CCM2-213ENST00000480658 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
CCM2-213ENST00000480658 HSBP1L1C9JCN9 74 aa6.47□□□□□ -1.37
CCM2-213ENST00000480658 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
CCM2-213ENST00000480658 C6orf99Q4VX62 202 aa6.47□□□□□ -1.37
CCM2-213ENST00000480658 TEX49A0A1B0GTD5 131 aa6.46□□□□□ -1.38
CCM2-213ENST00000480658 CD164Q04900 197 aa6.46□□□□□ -1.38
CCM2-213ENST00000480658 A6NDN8 102 aa6.45□□□□□ -1.38
CCM2-213ENST00000480658 TAL2Q16559 108 aa6.45□□□□□ -1.38
CCM2-213ENST00000480658 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
CCM2-213ENST00000480658 ST20-AS1Q8NBB2 130 aa6.44□□□□□ -1.38
CCM2-213ENST00000480658 PRO1933Q9H354 126 aa6.44□□□□□ -1.38
CCM2-213ENST00000480658 VAMP3Q15836 100 aa6.43□□□□□ -1.38
CCM2-213ENST00000480658 C21orf62-AS1Q17RA5 79 aa6.43□□□□□ -1.38
CCM2-213ENST00000480658 TTTY13Q9BZ97 58 aa6.43□□□□□ -1.38
CCM2-213ENST00000480658 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
CCM2-213ENST00000480658 ATOH7Q8N100 152 aa6.41□□□□□ -1.38
CCM2-213ENST00000480658 IGLV5-48A0A075B6I7 105 aa6.4□□□□□ -1.38
CCM2-213ENST00000480658 H7C2G1 150 aa6.4□□□□□ -1.38
CCM2-213ENST00000480658 MUSTN1Q8IVN3 82 aa6.4□□□□□ -1.38
CCM2-213ENST00000480658 F8WEM9 126 aa6.39□□□□□ -1.39
CCM2-213ENST00000480658 XP32Q5T750 250 aa6.39□□□□□ -1.39
CCM2-213ENST00000480658 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
CCM2-213ENST00000480658 Q5XG85 94 aa6.39□□□□□ -1.39
CCM2-213ENST00000480658 PCP2Q8IVA1 136 aa6.39□□□□□ -1.39
CCM2-213ENST00000480658 Q1RN00 199 aa6.38□□□□□ -1.39
CCM2-213ENST00000480658 DEFB105AQ8NG35 78 aa6.38□□□□□ -1.39
CCM2-213ENST00000480658 SCGB1D1O95968 90 aa6.36□□□□□ -1.39
CCM2-213ENST00000480658 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
CCM2-213ENST00000480658 SNCGO76070 127 aa6.35□□□□□ -1.39
CCM2-213ENST00000480658 TCL1BO95988 128 aa6.35□□□□□ -1.39
CCM2-213ENST00000480658 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
CCM2-213ENST00000480658 SMIM11BQ8TCY0 68 aa6.35□□□□□ -1.39
CCM2-213ENST00000480658 PPDPFLQ8WWR9 84 aa6.35□□□□□ -1.39
CCM2-213ENST00000480658 LINC01547P58512 204 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms