RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FAM19A2Q8N3H0 131 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 XAGE1AQ9HD64 81 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 NDUFA12Q9UI09 145 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 CBY1Q9Y3M2 126 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 A0A0J9YXY3 114 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 J3QQQ9 107 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 M0R378 163 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 KRTAP1-4P0C5Y4 121 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 SPRR1AP35321 89 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 UBE2BP63146 152 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 FAM229BQ4G0N7 80 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 MEIG1Q5JSS6 88 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 Q6ZVH6 145 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 FAM19A5Q7Z5A7 132 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-213ENST00000480102 LINC00518Q8N0U6 118 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 LINC00337Q8N6G1 96 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 NKAPP1Q8N9T2 125 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 KCNQ1DNQ9H478 68 aa2.95□□□□□ -1.94
PTCD3-213ENST00000480102 IGLV9-49A0A0B4J1Y8 123 aa2.94□□□□□ -1.94
PTCD3-213ENST00000480102 C20orf202A1L168 122 aa2.94□□□□□ -1.94
PTCD3-213ENST00000480102 LINC00167Q96N53 147 aa2.94□□□□□ -1.94
PTCD3-213ENST00000480102 KRTAP4-16G5E9R7 235 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-213ENST00000480102 LGALS3P17931 250 aaKnown RBP2.93□□□□□ -1.94
PTCD3-213ENST00000480102 PFN2P35080 140 aa2.93□□□□□ -1.94
PTCD3-213ENST00000480102 LINC00158P58513 81 aa2.93□□□□□ -1.94
PTCD3-213ENST00000480102 S100A12P80511 92 aa2.93□□□□□ -1.94
PTCD3-213ENST00000480102 KRTAP11-1Q8IUC1 163 aa2.93□□□□□ -1.94
PTCD3-213ENST00000480102 COPS9Q8WXC6 57 aa2.93□□□□□ -1.94
PTCD3-213ENST00000480102 SPANXB1Q9NS25 103 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-213ENST00000480102 IGLV6-57P01721 117 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 C3orf79P0CE67 100 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 FABP4P15090 132 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 Q6ZVQ6 151 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 MIR7-3HGQ8N6C7 128 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 TMEM126AQ9H061 195 aa2.92□□□□□ -1.94
PTCD3-213ENST00000480102 SCO1O75880 301 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 SMIM13P0DJ93 91 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 IFITM1P13164 125 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 TSPEAR-AS2P59090 65 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 SMIM29Q86T20 159 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 LITAFQ99732 161 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 MIEN1Q9BRT3 115 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 SPANXCQ9NY87 97 aa2.91□□□□□ -1.94
PTCD3-213ENST00000480102 ZNF706Q9Y5V0 76 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-213ENST00000480102 TRBV7-6A0A0J9YX20 115 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 CRYGAP11844 174 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.95
PTCD3-213ENST00000480102 LINC00483Q53H64 154 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 SPAG11AQ6PDA7 123 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 HIST3H2BBQ8N257 126 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 Q8NDZ9 215 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 SPANXDQ9BXN6 97 aa2.9□□□□□ -1.95
PTCD3-213ENST00000480102 LRP2P98164 4655 aa2.89□□□□□ -1.95
PTCD3-213ENST00000480102 TMEM238C9JI98 176 aa2.89□□□□□ -1.95
PTCD3-213ENST00000480102 DLEU1O43261 78 aa2.89□□□□□ -1.95
PTCD3-213ENST00000480102 UBE2AP49459 152 aa2.89□□□□□ -1.95
PTCD3-213ENST00000480102 JOSD1Q15040 202 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-213ENST00000480102 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
PTCD3-213ENST00000480102 HIST1H2BLQ99880 126 aa2.89□□□□□ -1.95
PTCD3-213ENST00000480102 IGKV2-28A0A075B6P5 120 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 TRBV10-3A0A0K0K1G6 114 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 RPL37AP8A6NKH3 93 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 DDTP30046 118 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 ADAMTSL4-AS1Q5T5F5 129 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 Q6ZRX8 168 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 LINC00308Q8TCZ7 52 aa2.88□□□□□ -1.95
PTCD3-213ENST00000480102 ZNF815PA8K554 130 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 HSBP1L1C9JCN9 74 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 ZNF73O43830 326 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-213ENST00000480102 S100A6P06703 90 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 SPRR1BP22528 89 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 S100A2P29034 98 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 HINT1P49773 126 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-213ENST00000480102 KRTDAPP60985 99 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 SOSTDC1Q6X4U4 206 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 SPRR4Q96PI1 79 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 PMCHL2Q9BQD1 86 aa2.87□□□□□ -1.95
PTCD3-213ENST00000480102 TRAV23DV6A0A075B6W5 121 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 A0A087X002 238 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 ETDCA0A1B0GVM5 59 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 S100A7L2Q5SY68 101 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 SLC25A34Q6PIV7 304 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 SCGB1D4Q6XE38 83 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 FAM19A1Q7Z5A9 133 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 FAM218AQ96MZ4 157 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 DHRS4-AS1Q9P1J3 65 aa2.86□□□□□ -1.95
PTCD3-213ENST00000480102 TRAV13-2A0A0B4J235 113 aa2.85□□□□□ -1.95
PTCD3-213ENST00000480102 SPINK1P00995 79 aa2.85□□□□□ -1.95
PTCD3-213ENST00000480102 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-213ENST00000480102 ELOF1P60002 83 aaKnown RBP2.85□□□□□ -1.95
PTCD3-213ENST00000480102 PRLHP81277 87 aa2.85□□□□□ -1.95
PTCD3-213ENST00000480102 FP248Q71RG6 208 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-213ENST00000480102 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
PTCD3-213ENST00000480102 SMCR5Q8TEV8 140 aa2.85□□□□□ -1.95
PTCD3-213ENST00000480102 A0A1B0GWB2 263 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 240.7 ms