RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 A6NDN8 102 aa9.3□□□□□ -0.92
C9orf3-217ENST00000479161 PRYO14603 147 aa9.3□□□□□ -0.92
C9orf3-217ENST00000479161 TAX1BP3O14907 124 aa9.3□□□□□ -0.92
C9orf3-217ENST00000479161 SPRR1AP35321 89 aa9.3□□□□□ -0.92
C9orf3-217ENST00000479161 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
C9orf3-217ENST00000479161 DAND5Q8N907 189 aa9.3□□□□□ -0.92
C9orf3-217ENST00000479161 UBE2AP49459 152 aa9.29□□□□□ -0.92
C9orf3-217ENST00000479161 LINC00337Q8N6G1 96 aa9.29□□□□□ -0.92
C9orf3-217ENST00000479161 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
C9orf3-217ENST00000479161 RPL13AP40429 203 aaKnown RBP9.28□□□□□ -0.92
C9orf3-217ENST00000479161 Q6ZVH6 145 aa9.28□□□□□ -0.92
C9orf3-217ENST00000479161 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.93
C9orf3-217ENST00000479161 CBY1Q9Y3M2 126 aa9.27□□□□□ -0.93
C9orf3-217ENST00000479161 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 KRTAP4-16G5E9R7 235 aaPredicted RBP9.26□□□□□ -0.93
C9orf3-217ENST00000479161 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 TAL2Q16559 108 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 LINC00308Q8TCZ7 52 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 SPANXDQ9BXN6 97 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 SPANXCQ9NY87 97 aa9.26□□□□□ -0.93
C9orf3-217ENST00000479161 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
C9orf3-217ENST00000479161 NCR3O14931 201 aa9.25□□□□□ -0.93
C9orf3-217ENST00000479161 TTTY13Q9BZ97 58 aa9.25□□□□□ -0.93
C9orf3-217ENST00000479161 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
C9orf3-217ENST00000479161 IFITM1P13164 125 aa9.24□□□□□ -0.93
C9orf3-217ENST00000479161 VAMP3Q15836 100 aa9.24□□□□□ -0.93
C9orf3-217ENST00000479161 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
C9orf3-217ENST00000479161 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
C9orf3-217ENST00000479161 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
C9orf3-217ENST00000479161 PRR26Q8N8Z3 221 aa9.23□□□□□ -0.93
C9orf3-217ENST00000479161 C9orf118A6NHY6 69 aa9.22□□□□□ -0.93
C9orf3-217ENST00000479161 PRLHP81277 87 aa9.22□□□□□ -0.93
C9orf3-217ENST00000479161 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.94
C9orf3-217ENST00000479161 ETDCA0A1B0GVM5 59 aa9.2□□□□□ -0.94
C9orf3-217ENST00000479161 CRYGAP11844 174 aa9.2□□□□□ -0.94
C9orf3-217ENST00000479161 GTF2H5Q6ZYL4 71 aa9.19□□□□□ -0.94
C9orf3-217ENST00000479161 B5MCH6 92 aa9.18□□□□□ -0.94
C9orf3-217ENST00000479161 NPC2P61916 151 aa9.18□□□□□ -0.94
C9orf3-217ENST00000479161 CEND1Q8N111 149 aa9.18□□□□□ -0.94
C9orf3-217ENST00000479161 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
C9orf3-217ENST00000479161 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-217ENST00000479161 Q6ZRX8 168 aa9.16□□□□□ -0.94
C9orf3-217ENST00000479161 HIGD2AQ9BW72 106 aa9.16□□□□□ -0.94
C9orf3-217ENST00000479161 UBR4Q5T4S7 5183 aa9.15□□□□□ -0.94
C9orf3-217ENST00000479161 A0A087X002 238 aa9.15□□□□□ -0.94
C9orf3-217ENST00000479161 ZNF73O43830 326 aaPredicted RBP9.15□□□□□ -0.94
C9orf3-217ENST00000479161 K7EP34 96 aa9.14□□□□□ -0.95
C9orf3-217ENST00000479161 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
C9orf3-217ENST00000479161 SPRR4Q96PI1 79 aa9.14□□□□□ -0.95
C9orf3-217ENST00000479161 FXYD2P54710 66 aa9.13□□□□□ -0.95
C9orf3-217ENST00000479161 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
C9orf3-217ENST00000479161 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
C9orf3-217ENST00000479161 MUSTN1Q8IVN3 82 aa9.12□□□□□ -0.95
C9orf3-217ENST00000479161 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 TMEM238LA0A1B0GVL6 79 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 A6NJY4 79 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 H3BUT2 72 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 FABP2P12104 132 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
C9orf3-217ENST00000479161 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
C9orf3-217ENST00000479161 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
C9orf3-217ENST00000479161 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
C9orf3-217ENST00000479161 Q9BRP9 147 aa9.1□□□□□ -0.95
C9orf3-217ENST00000479161 TRAV13-2A0A0B4J235 113 aa9.09□□□□□ -0.95
C9orf3-217ENST00000479161 ANAPC11Q9NYG5 84 aa9.09□□□□□ -0.95
C9orf3-217ENST00000479161 NHP2Q9NX24 153 aaKnown RBP9.08□□□□□ -0.96
C9orf3-217ENST00000479161 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
C9orf3-217ENST00000479161 RAB37Q96AX2 223 aa9.07□□□□□ -0.96
C9orf3-217ENST00000479161 DHRS4-AS1Q9P1J3 65 aa9.07□□□□□ -0.96
C9orf3-217ENST00000479161 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
C9orf3-217ENST00000479161 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
C9orf3-217ENST00000479161 A4D1N5 150 aa9.04□□□□□ -0.96
C9orf3-217ENST00000479161 K7ERU9 68 aa9.04□□□□□ -0.96
C9orf3-217ENST00000479161 C6orf99Q4VX62 202 aa9.04□□□□□ -0.96
C9orf3-217ENST00000479161 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
C9orf3-217ENST00000479161 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
C9orf3-217ENST00000479161 SPAG11AQ6PDA7 123 aa9.03□□□□□ -0.96
C9orf3-217ENST00000479161 COX7BP24311 80 aa9.02□□□□□ -0.97
C9orf3-217ENST00000479161 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
C9orf3-217ENST00000479161 K7ERJ3 54 aa9.01□□□□□ -0.97
C9orf3-217ENST00000479161 SPRR1BP22528 89 aa9.01□□□□□ -0.97
C9orf3-217ENST00000479161 GAGE2AQ6NT46 116 aa9□□□□□ -0.97
C9orf3-217ENST00000479161 SSBP3-AS1Q7Z2R9 100 aa9□□□□□ -0.97
C9orf3-217ENST00000479161 C3orf22Q8N5N4 141 aa9□□□□□ -0.97
C9orf3-217ENST00000479161 NAA38Q9BRA0 125 aaKnown RBP8.99□□□□□ -0.97
C9orf3-217ENST00000479161 LRP2P98164 4655 aa8.98□□□□□ -0.97
C9orf3-217ENST00000479161 F8W1H4 67 aa8.98□□□□□ -0.97
C9orf3-217ENST00000479161 SMIM11BQ8TCY0 68 aa8.98□□□□□ -0.97
C9orf3-217ENST00000479161 A0A0B4J2C4 111 aa8.95□□□□□ -0.98
C9orf3-217ENST00000479161 SPINK1P00995 79 aa8.94□□□□□ -0.98
C9orf3-217ENST00000479161 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
C9orf3-217ENST00000479161 ST20-AS1Q8NBB2 130 aa8.94□□□□□ -0.98
C9orf3-217ENST00000479161 TSPAN13O95857 204 aa8.93□□□□□ -0.98
C9orf3-217ENST00000479161 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
C9orf3-217ENST00000479161 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
C9orf3-217ENST00000479161 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
C9orf3-217ENST00000479161 Q8NBF4 154 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms