RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 HBDP02042 147 aa5.48□□□□□ -1.53
CCM2-210ENST00000478169 COX17Q14061 63 aa5.48□□□□□ -1.53
CCM2-210ENST00000478169 PMVKQ15126 192 aa5.48□□□□□ -1.53
CCM2-210ENST00000478169 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
CCM2-210ENST00000478169 A6NDN8 102 aa5.47□□□□□ -1.53
CCM2-210ENST00000478169 LINC01546A6NGU7 62 aa5.47□□□□□ -1.53
CCM2-210ENST00000478169 LINC01545Q5VT33 79 aa5.47□□□□□ -1.53
CCM2-210ENST00000478169 SND1-IT1Q9HBX3 110 aa5.47□□□□□ -1.53
CCM2-210ENST00000478169 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
CCM2-210ENST00000478169 SEC61BP60468 96 aaKnown RBP5.46□□□□□ -1.54
CCM2-210ENST00000478169 SPRR4Q96PI1 79 aa5.46□□□□□ -1.54
CCM2-210ENST00000478169 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
CCM2-210ENST00000478169 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
CCM2-210ENST00000478169 ERG28Q9UKR5 140 aa5.46□□□□□ -1.54
CCM2-210ENST00000478169 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.54
CCM2-210ENST00000478169 ZNF706Q9Y5V0 76 aaPredicted RBP5.46□□□□□ -1.54
CCM2-210ENST00000478169 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
CCM2-210ENST00000478169 SPINK1P00995 79 aa5.44□□□□□ -1.54
CCM2-210ENST00000478169 COX8AP10176 69 aa5.44□□□□□ -1.54
CCM2-210ENST00000478169 SFTA2Q6UW10 78 aa5.44□□□□□ -1.54
CCM2-210ENST00000478169 BOD1L2Q8IYS8 172 aa5.44□□□□□ -1.54
CCM2-210ENST00000478169 IFI27L1Q96BM0 104 aa5.44□□□□□ -1.54
CCM2-210ENST00000478169 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CCM2-210ENST00000478169 GTF2H5Q6ZYL4 71 aa5.43□□□□□ -1.54
CCM2-210ENST00000478169 Q8NBF4 154 aa5.43□□□□□ -1.54
CCM2-210ENST00000478169 Q8NDZ9 215 aa5.43□□□□□ -1.54
CCM2-210ENST00000478169 ZNF22P17026 224 aaPredicted RBP5.42□□□□□ -1.54
CCM2-210ENST00000478169 HINT1P49773 126 aaPredicted RBP5.42□□□□□ -1.54
CCM2-210ENST00000478169 UBE2V1Q13404 147 aa5.42□□□□□ -1.54
CCM2-210ENST00000478169 VAMP3Q15836 100 aa5.42□□□□□ -1.54
CCM2-210ENST00000478169 ATOH7Q8N100 152 aa5.42□□□□□ -1.54
CCM2-210ENST00000478169 DAND5Q8N907 189 aa5.42□□□□□ -1.54
CCM2-210ENST00000478169 H0Y8G0 127 aa5.41□□□□□ -1.54
CCM2-210ENST00000478169 PLNP26678 52 aa5.41□□□□□ -1.54
CCM2-210ENST00000478169 HSD52Q0P140 79 aa5.41□□□□□ -1.54
CCM2-210ENST00000478169 URB1-AS1Q96HZ7 61 aa5.41□□□□□ -1.54
CCM2-210ENST00000478169 ZNF625Q96I27 306 aaPredicted RBP5.41□□□□□ -1.54
CCM2-210ENST00000478169 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
CCM2-210ENST00000478169 PRYO14603 147 aa5.4□□□□□ -1.54
CCM2-210ENST00000478169 DPM2O94777 84 aa5.4□□□□□ -1.54
CCM2-210ENST00000478169 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.54
CCM2-210ENST00000478169 IGKCP01834 107 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 SPRR1AP35321 89 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 LINC00158P58513 81 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 TAL2Q16559 108 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 BVES-AS1Q5T3Y7 98 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 HIGD1BQ9P298 99 aa5.39□□□□□ -1.55
CCM2-210ENST00000478169 TRAV12-1A0A0B4J245 112 aa5.38□□□□□ -1.55
CCM2-210ENST00000478169 HERVK_113P61574 105 aa5.38□□□□□ -1.55
CCM2-210ENST00000478169 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
CCM2-210ENST00000478169 KCNQ1DNQ9H478 68 aa5.38□□□□□ -1.55
CCM2-210ENST00000478169 SLC25A20O43772 301 aa5.37□□□□□ -1.55
CCM2-210ENST00000478169 TMEM170BQ5T4T1 132 aa5.37□□□□□ -1.55
CCM2-210ENST00000478169 SSBP3-AS1Q7Z2R9 100 aa5.37□□□□□ -1.55
CCM2-210ENST00000478169 Q8N377 158 aa5.37□□□□□ -1.55
CCM2-210ENST00000478169 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
CCM2-210ENST00000478169 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
CCM2-210ENST00000478169 A0A096LNJ9 63 aa5.36□□□□□ -1.55
CCM2-210ENST00000478169 ETDCA0A1B0GVM5 59 aa5.36□□□□□ -1.55
CCM2-210ENST00000478169 C11orf86A6NJI1 115 aa5.36□□□□□ -1.55
CCM2-210ENST00000478169 KRTAP4-16G5E9R7 235 aaPredicted RBP5.36□□□□□ -1.55
CCM2-210ENST00000478169 K7ERU9 68 aa5.36□□□□□ -1.55
CCM2-210ENST00000478169 NMUP48645 174 aa5.36□□□□□ -1.55
CCM2-210ENST00000478169 A0A0U1RRA0 63 aa5.35□□□□□ -1.55
CCM2-210ENST00000478169 SMIM13P0DJ93 91 aa5.35□□□□□ -1.55
CCM2-210ENST00000478169 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
CCM2-210ENST00000478169 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
CCM2-210ENST00000478169 C9orf118A6NHY6 69 aa5.34□□□□□ -1.55
CCM2-210ENST00000478169 J3QR89 54 aa5.34□□□□□ -1.55
CCM2-210ENST00000478169 FABP2P12104 132 aa5.34□□□□□ -1.55
CCM2-210ENST00000478169 MOBPQ13875 183 aa5.34□□□□□ -1.55
CCM2-210ENST00000478169 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
CCM2-210ENST00000478169 NCR3O14931 201 aa5.33□□□□□ -1.56
CCM2-210ENST00000478169 CFC1BP0CG36 223 aa5.33□□□□□ -1.56
CCM2-210ENST00000478169 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
CCM2-210ENST00000478169 CHTOPQ9Y3Y2 248 aaKnown RBP5.33□□□□□ -1.56
CCM2-210ENST00000478169 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 TRBV10-3A0A0K0K1G6 114 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 TMEM223A0PJW6 202 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 B5MCH6 92 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
CCM2-210ENST00000478169 ERC2-IT1O76042 136 aa5.31□□□□□ -1.56
CCM2-210ENST00000478169 HERV-K104P63124 156 aa5.31□□□□□ -1.56
CCM2-210ENST00000478169 C2orf91Q6ZV80 131 aa5.31□□□□□ -1.56
CCM2-210ENST00000478169 MIR7-3HGQ8N6C7 128 aa5.31□□□□□ -1.56
CCM2-210ENST00000478169 MT1HP80294 61 aa5.3□□□□□ -1.56
CCM2-210ENST00000478169 CEND1Q8N111 149 aa5.3□□□□□ -1.56
CCM2-210ENST00000478169 HIST1H4GQ99525 98 aa5.3□□□□□ -1.56
CCM2-210ENST00000478169 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 E9PLD3 99 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 K7EP34 96 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 Q6ZRX8 168 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 Q9BRP9 147 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 SPCS1Q9Y6A9 102 aa5.29□□□□□ -1.56
CCM2-210ENST00000478169 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
CCM2-210ENST00000478169 A0A1W2PPM0 123 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms