RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 LINC00167Q96N53 147 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 KIR2DL4Q99706 377 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 CST9LQ9H4G1 147 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 OSTCQ9NRP0 149 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 NAT8BQ9UHF3 227 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 PRO0461Q9UI25 63 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 LAMTOR2Q9Y2Q5 125 aa2.59□□□□□ -1.99
CKS1B-207ENST00000477676 ZNF727A8MUV8 499 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 SCO1O75880 301 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 PFN2P35080 140 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 HBBP68871 147 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 SCGB1D4Q6XE38 83 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 C3orf22Q8N5N4 141 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 C20orf78Q9BR46 151 aa2.58□□□□□ -2
CKS1B-207ENST00000477676 C9JQL5 133 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 D6R8Y8 96 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
CKS1B-207ENST00000477676 CKS2P33552 79 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 RPL28P46779 137 aaKnown RBP2.57□□□□□ -2
CKS1B-207ENST00000477676 PMAIP1Q13794 54 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 Q6ZN92 141 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 GTF2H5Q6ZYL4 71 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 Q8N377 158 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 AMELXQ99217 191 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 SMIM7Q9BQ49 75 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 EIF5A2Q9GZV4 153 aaKnown RBP2.57□□□□□ -2
CKS1B-207ENST00000477676 TP73-AS1Q9UF72 201 aa2.57□□□□□ -2
CKS1B-207ENST00000477676 A0A1B0GXF2 115 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 PPP1R17O96001 155 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 RPL23P62829 140 aaKnown RBP2.56□□□□□ -2
CKS1B-207ENST00000477676 ASB16-AS1Q495Z4 193 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 CLLU1Q5K131 121 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 ALKAL2Q6UX46 152 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 TCTE3Q8IZS6 198 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 Q8NDZ9 215 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 TMEM141Q96I45 108 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 TOMM7Q9P0U1 55 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 NAT8Q9UHE5 227 aa2.56□□□□□ -2
CKS1B-207ENST00000477676 SSPOA2VEC9 5147 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 IGIPA6NJ69 53 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 PRLHP81277 87 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 MRPL54Q6P161 138 aaKnown RBP2.55□□□□□ -2
CKS1B-207ENST00000477676 FAM19A3Q7Z5A8 133 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 CBLN2Q8IUK8 224 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 Q8IZM0 81 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 DHRS4-AS1Q9P1J3 65 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 CDKN2A-AS1Q9UH64 79 aa2.55□□□□□ -2
CKS1B-207ENST00000477676 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 LOC389332A0A1B0GUA5 103 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 C9JAW5 83 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 F8VRH5 84 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 SERF1AO75920 110 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 IGKV2D-28P01615 120 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
CKS1B-207ENST00000477676 PSMB2P49721 201 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 MT1HP80294 61 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 FABP9Q0Z7S8 132 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 ANAPC13Q9BS18 74 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 SNHG12Q9BXW3 62 aa2.54□□□□□ -2
CKS1B-207ENST00000477676 IGLV8-61A0A075B6I0 122 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 IGKV2D-26A0A0A0MRZ7 120 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 DPM2O94777 84 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 UBE2AP49459 152 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 ADIRFQ15847 76 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 TEX43Q6ZNM6 134 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 TMEM136Q6ZRR5 245 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 PRELID3AQ96N28 172 aa2.53□□□□□ -2
CKS1B-207ENST00000477676 M0R378 163 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 CXCL6P80162 114 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 Q1RN00 199 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
CKS1B-207ENST00000477676 ORMDL3Q8N138 153 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 SVBPQ8N300 66 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 Q8N8P6 123 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 DAND5Q8N907 189 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 CYSLTR1Q9Y271 337 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 USH2AO75445 5202 aa2.52□□□□□ -2.01
CKS1B-207ENST00000477676 FAM236DA0A1B0GTK5 79 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 SPINK8P0C7L1 97 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 FAM236CP0DP71 79 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 ADCYAP1P18509 176 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 ANKRD29Q8N6D5 301 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 COX7B2Q8TF08 81 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 SPRR4Q96PI1 79 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 IMUPQ9GZP8 106 aa2.51□□□□□ -2.01
CKS1B-207ENST00000477676 CXCL5P42830 114 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 NDUFA6P56556 154 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 HERVK_113P63121 156 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 HSD52Q0P140 79 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 PYY3Q5JQD4 70 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 LYRM7Q5U5X0 104 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 Q6ZVH6 145 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 LINC00337Q8N6G1 96 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 NKAPP1Q8N9T2 125 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 COPS9Q8WXC6 57 aa2.5□□□□□ -2.01
CKS1B-207ENST00000477676 HIGD2AQ9BW72 106 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms