RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 RTL8CO15255 209 aa7.64□□□□□ -1.19
PRPF39-203ENST00000477626 LINC01547P58512 204 aaPredicted RBP7.64□□□□□ -1.19
PRPF39-203ENST00000477626 TRAV23DV6A0A075B6W5 121 aa7.63□□□□□ -1.19
PRPF39-203ENST00000477626 ETDBQ3ZM63 59 aa7.63□□□□□ -1.19
PRPF39-203ENST00000477626 Q1RN00 199 aa7.62□□□□□ -1.19
PRPF39-203ENST00000477626 C6orf99Q4VX62 202 aa7.62□□□□□ -1.19
PRPF39-203ENST00000477626 SPACA4Q8TDM5 124 aa7.62□□□□□ -1.19
PRPF39-203ENST00000477626 GAGE2EQ4V326 116 aa7.61□□□□□ -1.19
PRPF39-203ENST00000477626 GAGE2DQ9UEU5 116 aa7.61□□□□□ -1.19
PRPF39-203ENST00000477626 COX6CP09669 75 aa7.61□□□□□ -1.19
PRPF39-203ENST00000477626 C14orf177Q52M58 125 aa7.61□□□□□ -1.19
PRPF39-203ENST00000477626 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
PRPF39-203ENST00000477626 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
PRPF39-203ENST00000477626 B5MCH6 92 aa7.6□□□□□ -1.19
PRPF39-203ENST00000477626 Q9BRP9 147 aa7.6□□□□□ -1.19
PRPF39-203ENST00000477626 SCGB1C2P0DMR2 95 aa7.6□□□□□ -1.19
PRPF39-203ENST00000477626 SRRM2Q9UQ35 2752 aaKnown RBP7.59□□□□□ -1.19
PRPF39-203ENST00000477626 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
PRPF39-203ENST00000477626 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
PRPF39-203ENST00000477626 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
PRPF39-203ENST00000477626 PRYO14603 147 aa7.57□□□□□ -1.2
PRPF39-203ENST00000477626 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
PRPF39-203ENST00000477626 Q6ZSA8 131 aa7.57□□□□□ -1.2
PRPF39-203ENST00000477626 PPDPFLQ8WWR9 84 aa7.56□□□□□ -1.2
PRPF39-203ENST00000477626 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
PRPF39-203ENST00000477626 LCE6AA0A183 80 aa7.55□□□□□ -1.2
PRPF39-203ENST00000477626 Q6ZRX8 168 aa7.55□□□□□ -1.2
PRPF39-203ENST00000477626 IGLV5-48A0A075B6I7 105 aa7.54□□□□□ -1.2
PRPF39-203ENST00000477626 TNP2Q05952 138 aa7.54□□□□□ -1.2
PRPF39-203ENST00000477626 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
PRPF39-203ENST00000477626 DIRC1Q969H9 104 aa7.54□□□□□ -1.2
PRPF39-203ENST00000477626 HSPG2P98160 4391 aa7.54□□□□□ -1.2
PRPF39-203ENST00000477626 SMCR5Q8TEV8 140 aa7.54□□□□□ -1.2
PRPF39-203ENST00000477626 BAALC-AS2P0C853 105 aa7.53□□□□□ -1.2
PRPF39-203ENST00000477626 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
PRPF39-203ENST00000477626 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
PRPF39-203ENST00000477626 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
PRPF39-203ENST00000477626 H0Y9J4 135 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 GAGE2BQ13066 116 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.52□□□□□ -1.21
PRPF39-203ENST00000477626 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 PSCAO43653 123 aa7.52□□□□□ -1.21
PRPF39-203ENST00000477626 FUSP35637 526 aaKnown RBP eCLIP7.51□□□□□ -1.21
PRPF39-203ENST00000477626 COX7BP24311 80 aa7.51□□□□□ -1.21
PRPF39-203ENST00000477626 INAFM2P0DMQ5 153 aa7.51□□□□□ -1.21
PRPF39-203ENST00000477626 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
PRPF39-203ENST00000477626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
PRPF39-203ENST00000477626 RPL37AP8A6NKH3 93 aa7.49□□□□□ -1.21
PRPF39-203ENST00000477626 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
PRPF39-203ENST00000477626 K7ERU9 68 aa7.48□□□□□ -1.21
PRPF39-203ENST00000477626 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
PRPF39-203ENST00000477626 Q8N377 158 aa7.48□□□□□ -1.21
PRPF39-203ENST00000477626 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
PRPF39-203ENST00000477626 PHF5AQ7RTV0 110 aaKnown RBP7.48□□□□□ -1.21
PRPF39-203ENST00000477626 LOC110117498A0A087WWA1 95 aa7.48□□□□□ -1.21
PRPF39-203ENST00000477626 LINC00474Q9P2X8 69 aa7.48□□□□□ -1.21
PRPF39-203ENST00000477626 REG3GQ6UW15 175 aa7.47□□□□□ -1.21
PRPF39-203ENST00000477626 NKAPP1Q8N9T2 125 aa7.47□□□□□ -1.21
PRPF39-203ENST00000477626 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
PRPF39-203ENST00000477626 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
PRPF39-203ENST00000477626 TMEM256-PLSCR3K7ERE1 68 aa7.46□□□□□ -1.21
PRPF39-203ENST00000477626 Q6ZQY7 126 aa7.45□□□□□ -1.22
PRPF39-203ENST00000477626 PKIGQ9Y2B9 76 aa7.45□□□□□ -1.22
PRPF39-203ENST00000477626 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
PRPF39-203ENST00000477626 FAT1Q14517 4588 aa7.45□□□□□ -1.22
PRPF39-203ENST00000477626 SPRR1BP22528 89 aa7.44□□□□□ -1.22
PRPF39-203ENST00000477626 Q6ZQT0 140 aa7.44□□□□□ -1.22
PRPF39-203ENST00000477626 H3BQ85 93 aa7.44□□□□□ -1.22
PRPF39-203ENST00000477626 TNXBP22105 4242 aa7.43□□□□□ -1.22
PRPF39-203ENST00000477626 IGKV2-24A0A0C4DH68 120 aa7.43□□□□□ -1.22
PRPF39-203ENST00000477626 DHRS4-AS1Q9P1J3 65 aa7.43□□□□□ -1.22
PRPF39-203ENST00000477626 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
PRPF39-203ENST00000477626 IGLV8-61A0A075B6I0 122 aa7.42□□□□□ -1.22
PRPF39-203ENST00000477626 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
PRPF39-203ENST00000477626 ST20-AS1Q8NBB2 130 aa7.41□□□□□ -1.22
PRPF39-203ENST00000477626 XGP55808 180 aa7.41□□□□□ -1.22
PRPF39-203ENST00000477626 EPPK1P58107 5090 aaKnown RBP7.4□□□□□ -1.22
PRPF39-203ENST00000477626 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
PRPF39-203ENST00000477626 CCKP06307 115 aa7.4□□□□□ -1.22
PRPF39-203ENST00000477626 RYR1P21817 5038 aa7.4□□□□□ -1.23
PRPF39-203ENST00000477626 DNAL4O96015 105 aa7.4□□□□□ -1.23
PRPF39-203ENST00000477626 LINC00483Q53H64 154 aa7.4□□□□□ -1.23
PRPF39-203ENST00000477626 C14orf132Q9NPU4 83 aa7.39□□□□□ -1.23
PRPF39-203ENST00000477626 BCE1O60756 84 aa7.39□□□□□ -1.23
PRPF39-203ENST00000477626 JMJD7-PLA2G4BH0Y9G9 81 aa7.38□□□□□ -1.23
PRPF39-203ENST00000477626 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
PRPF39-203ENST00000477626 ACYP1P07311 99 aa7.36□□□□□ -1.23
PRPF39-203ENST00000477626 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
PRPF39-203ENST00000477626 PRLHP81277 87 aa7.35□□□□□ -1.23
PRPF39-203ENST00000477626 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
PRPF39-203ENST00000477626 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
PRPF39-203ENST00000477626 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
PRPF39-203ENST00000477626 MT-ATP8P03928 68 aa7.34□□□□□ -1.23
PRPF39-203ENST00000477626 J3QR89 54 aa7.33□□□□□ -1.24
PRPF39-203ENST00000477626 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
PRPF39-203ENST00000477626 ETDCA0A1B0GVM5 59 aa7.33□□□□□ -1.24
PRPF39-203ENST00000477626 LINC00336Q6ZUF6 198 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms