RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 A0A1B0GWB2 263 aa10.87□□□□□ -0.67
SREBF1-211ENST00000476994 UBE2BP63146 152 aa10.87□□□□□ -0.67
SREBF1-211ENST00000476994 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
SREBF1-211ENST00000476994 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
SREBF1-211ENST00000476994 TMEM238LA0A1B0GVL6 79 aa10.86□□□□□ -0.67
SREBF1-211ENST00000476994 A6NJY4 79 aa10.86□□□□□ -0.67
SREBF1-211ENST00000476994 HINT1P49773 126 aaPredicted RBP10.86□□□□□ -0.67
SREBF1-211ENST00000476994 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
SREBF1-211ENST00000476994 TRAV13-2A0A0B4J235 113 aa10.85□□□□□ -0.67
SREBF1-211ENST00000476994 SPRR1AP35321 89 aa10.85□□□□□ -0.67
SREBF1-211ENST00000476994 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
SREBF1-211ENST00000476994 M0R143 59 aa10.84□□□□□ -0.67
SREBF1-211ENST00000476994 PRYO14603 147 aa10.84□□□□□ -0.67
SREBF1-211ENST00000476994 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
SREBF1-211ENST00000476994 OR13C6PQ8NH95 151 aa10.83□□□□□ -0.68
SREBF1-211ENST00000476994 NHP2Q9NX24 153 aaKnown RBP10.83□□□□□ -0.68
SREBF1-211ENST00000476994 FAT3Q8TDW7 4589 aa10.83□□□□□ -0.68
SREBF1-211ENST00000476994 A6NDN8 102 aa10.82□□□□□ -0.68
SREBF1-211ENST00000476994 K7ERJ3 54 aa10.82□□□□□ -0.68
SREBF1-211ENST00000476994 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
SREBF1-211ENST00000476994 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
SREBF1-211ENST00000476994 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
SREBF1-211ENST00000476994 RAB37Q96AX2 223 aa10.8□□□□□ -0.68
SREBF1-211ENST00000476994 BCE1O60756 84 aa10.79□□□□□ -0.68
SREBF1-211ENST00000476994 KRTAP13-1Q8IUC0 172 aa10.79□□□□□ -0.68
SREBF1-211ENST00000476994 SMIM11BQ8TCY0 68 aa10.79□□□□□ -0.68
SREBF1-211ENST00000476994 PRO1854Q9UHT4 67 aa10.79□□□□□ -0.68
SREBF1-211ENST00000476994 ZNF73O43830 326 aaPredicted RBP10.78□□□□□ -0.68
SREBF1-211ENST00000476994 C1orf137Q5JT78 98 aa10.78□□□□□ -0.68
SREBF1-211ENST00000476994 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
SREBF1-211ENST00000476994 SNHG12Q9BXW3 62 aa10.76□□□□□ -0.69
SREBF1-211ENST00000476994 CBY1Q9Y3M2 126 aa10.76□□□□□ -0.69
SREBF1-211ENST00000476994 IGLV7-43P04211 117 aa10.75□□□□□ -0.69
SREBF1-211ENST00000476994 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
SREBF1-211ENST00000476994 C6orf99Q4VX62 202 aa10.75□□□□□ -0.69
SREBF1-211ENST00000476994 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
SREBF1-211ENST00000476994 B5MCH6 92 aa10.74□□□□□ -0.69
SREBF1-211ENST00000476994 DIRC1Q969H9 104 aa10.74□□□□□ -0.69
SREBF1-211ENST00000476994 TSPAN13O95857 204 aa10.73□□□□□ -0.69
SREBF1-211ENST00000476994 BATFQ16520 125 aa10.73□□□□□ -0.69
SREBF1-211ENST00000476994 TRBV7-6A0A0J9YX20 115 aa10.72□□□□□ -0.69
SREBF1-211ENST00000476994 H0Y9J4 135 aa10.72□□□□□ -0.69
SREBF1-211ENST00000476994 H7C2G1 150 aa10.72□□□□□ -0.69
SREBF1-211ENST00000476994 PRLHP81277 87 aa10.72□□□□□ -0.69
SREBF1-211ENST00000476994 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
SREBF1-211ENST00000476994 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
SREBF1-211ENST00000476994 Q6ZRX8 168 aa10.71□□□□□ -0.69
SREBF1-211ENST00000476994 ZNF861PO60384 105 aa10.7□□□□□ -0.7
SREBF1-211ENST00000476994 ELOF1P60002 83 aaKnown RBP10.7□□□□□ -0.7
SREBF1-211ENST00000476994 Q9BRP9 147 aa10.69□□□□□ -0.7
SREBF1-211ENST00000476994 UBE2AP49459 152 aa10.68□□□□□ -0.7
SREBF1-211ENST00000476994 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
SREBF1-211ENST00000476994 TRIAP1O43715 76 aa10.67□□□□□ -0.7
SREBF1-211ENST00000476994 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
SREBF1-211ENST00000476994 COX7BP24311 80 aa10.67□□□□□ -0.7
SREBF1-211ENST00000476994 Q1RN00 199 aa10.67□□□□□ -0.7
SREBF1-211ENST00000476994 TAX1BP3O14907 124 aa10.65□□□□□ -0.7
SREBF1-211ENST00000476994 UBR4Q5T4S7 5183 aa10.64□□□□□ -0.71
SREBF1-211ENST00000476994 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
SREBF1-211ENST00000476994 SPINK6Q6UWN8 80 aa10.62□□□□□ -0.71
SREBF1-211ENST00000476994 NAA38Q9BRA0 125 aaKnown RBP10.62□□□□□ -0.71
SREBF1-211ENST00000476994 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
SREBF1-211ENST00000476994 LINC00575Q6W349 94 aa10.61□□□□□ -0.71
SREBF1-211ENST00000476994 FAM218AQ96MZ4 157 aa10.61□□□□□ -0.71
SREBF1-211ENST00000476994 VAMP3Q15836 100 aa10.6□□□□□ -0.71
SREBF1-211ENST00000476994 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
SREBF1-211ENST00000476994 DHRS4-AS1Q9P1J3 65 aa10.6□□□□□ -0.71
SREBF1-211ENST00000476994 C9orf118A6NHY6 69 aa10.59□□□□□ -0.71
SREBF1-211ENST00000476994 H0YGX0 51 aa10.59□□□□□ -0.71
SREBF1-211ENST00000476994 COL5A1-AS1Q5SY13 56 aa10.59□□□□□ -0.71
SREBF1-211ENST00000476994 PSMB2P49721 201 aa10.58□□□□□ -0.72
SREBF1-211ENST00000476994 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
SREBF1-211ENST00000476994 H3BUT2 72 aa10.56□□□□□ -0.72
SREBF1-211ENST00000476994 KRTAP1-4P0C5Y4 121 aa10.56□□□□□ -0.72
SREBF1-211ENST00000476994 COX6CP09669 75 aa10.54□□□□□ -0.72
SREBF1-211ENST00000476994 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
SREBF1-211ENST00000476994 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
SREBF1-211ENST00000476994 TNXBP22105 4242 aa10.54□□□□□ -0.72
SREBF1-211ENST00000476994 A0A1B0GX51 115 aa10.53□□□□□ -0.72
SREBF1-211ENST00000476994 hADV29S1A0JD25 119 aa10.53□□□□□ -0.72
SREBF1-211ENST00000476994 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
SREBF1-211ENST00000476994 A0A1W2PPM0 123 aa10.51□□□□□ -0.73
SREBF1-211ENST00000476994 LST1O00453 97 aa10.51□□□□□ -0.73
SREBF1-211ENST00000476994 SLC25A20O43772 301 aa10.51□□□□□ -0.73
SREBF1-211ENST00000476994 IGLV5-48A0A075B6I7 105 aa10.5□□□□□ -0.73
SREBF1-211ENST00000476994 TCL1BO95988 128 aa10.5□□□□□ -0.73
SREBF1-211ENST00000476994 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
SREBF1-211ENST00000476994 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
SREBF1-211ENST00000476994 SPRR1BP22528 89 aa10.49□□□□□ -0.73
SREBF1-211ENST00000476994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.49□□□□□ -0.73
SREBF1-211ENST00000476994 Q6ZQY7 126 aa10.49□□□□□ -0.73
SREBF1-211ENST00000476994 ZNF706Q9Y5V0 76 aaPredicted RBP10.48□□□□□ -0.73
SREBF1-211ENST00000476994 TRACP01848 142 aa10.47□□□□□ -0.73
SREBF1-211ENST00000476994 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
SREBF1-211ENST00000476994 LYRM7Q5U5X0 104 aa10.46□□□□□ -0.73
SREBF1-211ENST00000476994 LRP2P98164 4655 aa10.45□□□□□ -0.74
SREBF1-211ENST00000476994 KRTAP10-8P60410 259 aa10.45□□□□□ -0.74
SREBF1-211ENST00000476994 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
SREBF1-211ENST00000476994 Q8N377 158 aa10.45□□□□□ -0.74
SREBF1-211ENST00000476994 A0A087X002 238 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms