RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
UBXN11-214ENST00000475591 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
UBXN11-214ENST00000475591 DSCR8Q96T75 97 aa9.13□□□□□ -0.95
UBXN11-214ENST00000475591 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
UBXN11-214ENST00000475591 HRCT1Q6UXD1 115 aa9.12□□□□□ -0.95
UBXN11-214ENST00000475591 DNAH7Q8WXX0 4024 aa9.12□□□□□ -0.95
UBXN11-214ENST00000475591 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
UBXN11-214ENST00000475591 KRTAP1-5Q9BYS1 174 aa9.11□□□□□ -0.95
UBXN11-214ENST00000475591 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
UBXN11-214ENST00000475591 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
UBXN11-214ENST00000475591 FAM19A1Q7Z5A9 133 aa9.11□□□□□ -0.95
UBXN11-214ENST00000475591 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
UBXN11-214ENST00000475591 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
UBXN11-214ENST00000475591 UPK3BQ9BT76 320 aa9.1□□□□□ -0.95
UBXN11-214ENST00000475591 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
UBXN11-214ENST00000475591 C9orf153Q5TBE3 101 aa9.09□□□□□ -0.95
UBXN11-214ENST00000475591 TRBV7-4A0A0J9YYF1 115 aa9.08□□□□□ -0.96
UBXN11-214ENST00000475591 MDFIQ99750 246 aa9.08□□□□□ -0.96
UBXN11-214ENST00000475591 DEFB105AQ8NG35 78 aa9.08□□□□□ -0.96
UBXN11-214ENST00000475591 RMI2Q96E14 147 aa9.08□□□□□ -0.96
UBXN11-214ENST00000475591 H3BQ85 93 aa9.07□□□□□ -0.96
UBXN11-214ENST00000475591 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
UBXN11-214ENST00000475591 Q6ZVQ6 151 aa9.06□□□□□ -0.96
UBXN11-214ENST00000475591 C3orf22Q8N5N4 141 aa9.06□□□□□ -0.96
UBXN11-214ENST00000475591 ATOX1O00244 68 aa9.06□□□□□ -0.96
UBXN11-214ENST00000475591 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
UBXN11-214ENST00000475591 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
UBXN11-214ENST00000475591 PKIGQ9Y2B9 76 aa9.05□□□□□ -0.96
UBXN11-214ENST00000475591 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
UBXN11-214ENST00000475591 HAMPP81172 84 aa9.05□□□□□ -0.96
UBXN11-214ENST00000475591 Q9BRP9 147 aa9.05□□□□□ -0.96
UBXN11-214ENST00000475591 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
UBXN11-214ENST00000475591 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
UBXN11-214ENST00000475591 UQCRQO14949 82 aa9.04□□□□□ -0.96
UBXN11-214ENST00000475591 COX7CP15954 63 aa9.04□□□□□ -0.96
UBXN11-214ENST00000475591 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
UBXN11-214ENST00000475591 PDE6GP18545 87 aa9.03□□□□□ -0.96
UBXN11-214ENST00000475591 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
UBXN11-214ENST00000475591 Q8N377 158 aa9.03□□□□□ -0.96
UBXN11-214ENST00000475591 IGLV5-37A0A075B6J1 123 aa9.03□□□□□ -0.96
UBXN11-214ENST00000475591 GHRHP01286 108 aa9.02□□□□□ -0.96
UBXN11-214ENST00000475591 Q6ZRX8 168 aa9.02□□□□□ -0.96
UBXN11-214ENST00000475591 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
UBXN11-214ENST00000475591 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.97
UBXN11-214ENST00000475591 UBE2DNLQ8IWF7 75 aa9.01□□□□□ -0.97
UBXN11-214ENST00000475591 ST20-AS1Q8NBB2 130 aa9.01□□□□□ -0.97
UBXN11-214ENST00000475591 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
UBXN11-214ENST00000475591 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
UBXN11-214ENST00000475591 PRYO14603 147 aa9□□□□□ -0.97
UBXN11-214ENST00000475591 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
UBXN11-214ENST00000475591 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
UBXN11-214ENST00000475591 SPRR1AP35321 89 aa9□□□□□ -0.97
UBXN11-214ENST00000475591 RPS28P62857 69 aaKnown RBP9□□□□□ -0.97
UBXN11-214ENST00000475591 A0A096LNI7 61 aa8.99□□□□□ -0.97
UBXN11-214ENST00000475591 ERC2-IT1O76042 136 aa8.99□□□□□ -0.97
UBXN11-214ENST00000475591 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
UBXN11-214ENST00000475591 PSCAO43653 123 aa8.99□□□□□ -0.97
UBXN11-214ENST00000475591 Q5XG85 94 aa8.98□□□□□ -0.97
UBXN11-214ENST00000475591 OXTP01178 125 aa8.97□□□□□ -0.97
UBXN11-214ENST00000475591 SERP2Q8N6R1 65 aa8.97□□□□□ -0.97
UBXN11-214ENST00000475591 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
UBXN11-214ENST00000475591 V9GYY9 64 aa8.96□□□□□ -0.97
UBXN11-214ENST00000475591 STARD9Q9P2P6 4700 aa8.96□□□□□ -0.98
UBXN11-214ENST00000475591 A0A1W2PNN7 141 aa8.96□□□□□ -0.98
UBXN11-214ENST00000475591 C3orf84H3BNL1 204 aa8.96□□□□□ -0.98
UBXN11-214ENST00000475591 PRO0628Q9UI54 55 aa8.96□□□□□ -0.98
UBXN11-214ENST00000475591 B9D2Q9BPU9 175 aa8.95□□□□□ -0.98
UBXN11-214ENST00000475591 UBE2BP63146 152 aa8.95□□□□□ -0.98
UBXN11-214ENST00000475591 CRYGAP11844 174 aa8.94□□□□□ -0.98
UBXN11-214ENST00000475591 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
UBXN11-214ENST00000475591 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
UBXN11-214ENST00000475591 CXCL6P80162 114 aa8.93□□□□□ -0.98
UBXN11-214ENST00000475591 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
UBXN11-214ENST00000475591 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
UBXN11-214ENST00000475591 CNBPP62633 177 aaKnown RBP8.93□□□□□ -0.98
UBXN11-214ENST00000475591 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
UBXN11-214ENST00000475591 C16orf90A8MZG2 172 aa8.92□□□□□ -0.98
UBXN11-214ENST00000475591 Q8N9L7 120 aa8.92□□□□□ -0.98
UBXN11-214ENST00000475591 PRKDCP78527 4128 aaKnown RBP8.92□□□□□ -0.98
UBXN11-214ENST00000475591 PRLHP81277 87 aa8.91□□□□□ -0.98
UBXN11-214ENST00000475591 TNP2Q05952 138 aa8.9□□□□□ -0.98
UBXN11-214ENST00000475591 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.99
UBXN11-214ENST00000475591 FAM236CP0DP71 79 aa8.9□□□□□ -0.99
UBXN11-214ENST00000475591 A0A1W2PNM2 257 aa8.89□□□□□ -0.99
UBXN11-214ENST00000475591 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
UBXN11-214ENST00000475591 NREPQ16612 68 aa8.89□□□□□ -0.99
UBXN11-214ENST00000475591 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
UBXN11-214ENST00000475591 A0A0G2JQZ4 141 aa8.88□□□□□ -0.99
UBXN11-214ENST00000475591 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
UBXN11-214ENST00000475591 LRCOL1A6NCL2 159 aa8.86□□□□□ -0.99
UBXN11-214ENST00000475591 BPY2O14599 106 aa8.86□□□□□ -0.99
UBXN11-214ENST00000475591 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
UBXN11-214ENST00000475591 SRRM2Q9UQ35 2752 aaKnown RBP8.86□□□□□ -0.99
UBXN11-214ENST00000475591 NBDYA0A0U1RRE5 68 aa8.86□□□□□ -0.99
UBXN11-214ENST00000475591 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
UBXN11-214ENST00000475591 DNHD1Q96M86 4753 aa8.86□□□□□ -0.99
UBXN11-214ENST00000475591 HIGD2AQ9BW72 106 aa8.85□□□□□ -0.99
UBXN11-214ENST00000475591 A0A0U1RQV1 116 aa8.84□□□□□ -0.99
UBXN11-214ENST00000475591 IGKV4-1P06312 121 aa8.84□□□□□ -0.99
UBXN11-214ENST00000475591 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms