RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KALRNO60229 2985 aa3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 WDFY4Q6ZS81 3184 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 KRTAP29-1A8MX34 341 aaPredicted RBP3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 DCHS1Q96JQ0 3298 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 LAMA1P25391 3075 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 C1orf137Q5JT78 98 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 PCNX1Q96RV3 2341 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 ZDBF2Q9HCK1 2354 aa3.25□□□□□ -1.89
TMEM39A-206ENST00000473684 IGLV1-50A0A075B6I6 118 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 Q8N377 158 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 AKAP9Q99996 3911 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 PKD1L2Q7Z442 2459 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 ROMO1P60602 79 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 Q6ZR54 194 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 WFDC13Q8IUB5 93 aa3.24□□□□□ -1.89
TMEM39A-206ENST00000473684 CHD6Q8TD26 2715 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 CACNA1BQ00975 2339 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 SPEGQ15772 3267 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 WDFY3Q8IZQ1 3526 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 WNK1Q9H4A3 2382 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 DMXL1Q9Y485 3027 aa3.23□□□□□ -1.89
TMEM39A-206ENST00000473684 CR1P17927 2039 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 UNQ6190/PRO20217Q6UXQ8 127 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 WFDC10BQ8IUB3 73 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 CHCHD10Q8WYQ3 142 aaPredicted RBP3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 SPTBN4Q9H254 2564 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 APC2O95996 2303 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 A6NDX4 124 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 DSPP15924 2871 aaKnown RBP3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 PDZD2O15018 2839 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 GCN1Q92616 2671 aaKnown RBP3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 ANK2Q01484 3957 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 DEFB131BA0A096LNP1 70 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
TMEM39A-206ENST00000473684 MUC3AQ02505 3323 aa3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 CNOT1A5YKK6 2376 aaKnown RBP3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 BSNQ9UPA5 3926 aa3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 HRES1P13985 223 aa3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 C7orf33Q8WU49 177 aa3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 C16orf74Q96GX8 76 aa3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 NOP10Q9NPE3 64 aaKnown RBP3.21□□□□□ -1.9
TMEM39A-206ENST00000473684 AKAP13Q12802 2813 aa3.2□□□□□ -1.9
TMEM39A-206ENST00000473684 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
TMEM39A-206ENST00000473684 XAGE1AQ9HD64 81 aa3.2□□□□□ -1.9
TMEM39A-206ENST00000473684 EPG5Q9HCE0 2579 aa3.2□□□□□ -1.9
TMEM39A-206ENST00000473684 REG3GQ6UW15 175 aa3.2□□□□□ -1.9
TMEM39A-206ENST00000473684 DEFB105AQ8NG35 78 aa3.2□□□□□ -1.9
TMEM39A-206ENST00000473684 KRTAP10-11P60412 298 aa3.19□□□□□ -1.9
TMEM39A-206ENST00000473684 CLPSL2Q6UWE3 100 aa3.19□□□□□ -1.9
TMEM39A-206ENST00000473684 ZNF462Q96JM2 2506 aa3.19□□□□□ -1.9
TMEM39A-206ENST00000473684 GPR179Q6PRD1 2367 aa3.19□□□□□ -1.9
TMEM39A-206ENST00000473684 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
TMEM39A-206ENST00000473684 REG3AQ06141 175 aa3.19□□□□□ -1.9
TMEM39A-206ENST00000473684 LY6EQ16553 131 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 ATRXP46100 2492 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 PTPRZ1P23471 2315 aaPredicted RBP3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 A8MWP4 228 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 H3BUX3 64 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 BRD3OSQ6XYD6 125 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 C6orf48Q9UBA6 75 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 AKAP6Q13023 2319 aa3.18□□□□□ -1.9
TMEM39A-206ENST00000473684 DEFB109BQ30KR1 87 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 KRTAP24-1Q3LI83 254 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 DMDP11532 3685 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 UQCR11O14957 56 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 EGFEM1PQ0D2K5 195 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 PCOTHQ58A44 107 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 ACACBO00763 2458 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 CFAP46Q8IYW2 2715 aa3.17□□□□□ -1.9
TMEM39A-206ENST00000473684 PRRC2CQ9Y520 2896 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 IGLV10-54A0A075B6I4 117 aa3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 ANGP03950 147 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 Q6ZRX8 168 aa3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 ZFHX4Q86UP3 3567 aa3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 MYO15AQ9UKN7 3530 aa3.16□□□□□ -1.9
TMEM39A-206ENST00000473684 A0A1B0GU69 56 aa3.15□□□□□ -1.9
TMEM39A-206ENST00000473684 ZNF861PO60384 105 aa3.15□□□□□ -1.9
TMEM39A-206ENST00000473684 CSNK1G2-AS1Q8NCQ2 148 aa3.15□□□□□ -1.9
TMEM39A-206ENST00000473684 IGKV2-24A0A0C4DH68 120 aa3.15□□□□□ -1.91
TMEM39A-206ENST00000473684 DEFB113Q30KQ7 82 aa3.15□□□□□ -1.91
TMEM39A-206ENST00000473684 TACC2O95359 2948 aa3.15□□□□□ -1.91
TMEM39A-206ENST00000473684 NBPF19A0A087WUL8 3843 aa3.14□□□□□ -1.91
TMEM39A-206ENST00000473684 KRTAP1-1Q07627 177 aa3.14□□□□□ -1.91
TMEM39A-206ENST00000473684 C2CD3Q4AC94 2353 aa3.14□□□□□ -1.91
TMEM39A-206ENST00000473684 DMXL2Q8TDJ6 3036 aa3.14□□□□□ -1.91
TMEM39A-206ENST00000473684 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
TMEM39A-206ENST00000473684 A0A087WSZ3 146 aa3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 ACYP2P14621 99 aa3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 CMC4P56277 68 aaPredicted RBP3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 PIEZO2Q9H5I5 2752 aa3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 MMP24-AS1A0A0U1RRL7 71 aa3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 RPL37AP61513 92 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms