RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
SMC4-213ENST00000472282 NCR3O14931 201 aa5.59□□□□□ -1.51
SMC4-213ENST00000472282 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
SMC4-213ENST00000472282 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
SMC4-213ENST00000472282 TMEM238C9JI98 176 aa5.58□□□□□ -1.52
SMC4-213ENST00000472282 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
SMC4-213ENST00000472282 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
SMC4-213ENST00000472282 VAMP8Q9BV40 100 aa5.58□□□□□ -1.52
SMC4-213ENST00000472282 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
SMC4-213ENST00000472282 M0R378 163 aa5.57□□□□□ -1.52
SMC4-213ENST00000472282 SRSF9Q13242 221 aaKnown RBP eCLIP5.57□□□□□ -1.52
SMC4-213ENST00000472282 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
SMC4-213ENST00000472282 PYY3Q5JQD4 70 aa5.57□□□□□ -1.52
SMC4-213ENST00000472282 LINC00308Q8TCZ7 52 aa5.57□□□□□ -1.52
SMC4-213ENST00000472282 SPANXDQ9BXN6 97 aa5.57□□□□□ -1.52
SMC4-213ENST00000472282 SPANXCQ9NY87 97 aa5.57□□□□□ -1.52
SMC4-213ENST00000472282 IGLV1-50A0A075B6I6 118 aa5.56□□□□□ -1.52
SMC4-213ENST00000472282 NDUFC2O95298 119 aa5.56□□□□□ -1.52
SMC4-213ENST00000472282 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
SMC4-213ENST00000472282 SPANXB1Q9NS25 103 aaPredicted RBP5.56□□□□□ -1.52
SMC4-213ENST00000472282 COX8AP10176 69 aa5.55□□□□□ -1.52
SMC4-213ENST00000472282 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
SMC4-213ENST00000472282 SPINK6Q6UWN8 80 aa5.55□□□□□ -1.52
SMC4-213ENST00000472282 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
SMC4-213ENST00000472282 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
SMC4-213ENST00000472282 BCE1O60756 84 aa5.54□□□□□ -1.52
SMC4-213ENST00000472282 REG3GQ6UW15 175 aa5.54□□□□□ -1.52
SMC4-213ENST00000472282 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
SMC4-213ENST00000472282 TMEM126AQ9H061 195 aa5.54□□□□□ -1.52
SMC4-213ENST00000472282 PRYO14603 147 aa5.53□□□□□ -1.52
SMC4-213ENST00000472282 IFITM1P13164 125 aa5.53□□□□□ -1.52
SMC4-213ENST00000472282 DDTP30046 118 aa5.53□□□□□ -1.52
SMC4-213ENST00000472282 Q6ZVH6 145 aa5.53□□□□□ -1.52
SMC4-213ENST00000472282 DLEU1O43261 78 aa5.52□□□□□ -1.53
SMC4-213ENST00000472282 UBE2AP49459 152 aa5.52□□□□□ -1.53
SMC4-213ENST00000472282 S100A7L2Q5SY68 101 aa5.52□□□□□ -1.53
SMC4-213ENST00000472282 FAM19A1Q7Z5A9 133 aa5.52□□□□□ -1.53
SMC4-213ENST00000472282 MUSTN1Q8IVN3 82 aa5.52□□□□□ -1.53
SMC4-213ENST00000472282 COPS9Q8WXC6 57 aa5.52□□□□□ -1.53
SMC4-213ENST00000472282 H0Y9J4 135 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 ZNF861PO60384 105 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 PRLHP81277 87 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 DIRC1Q969H9 104 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 KCNQ1DNQ9H478 68 aa5.51□□□□□ -1.53
SMC4-213ENST00000472282 LRP2P98164 4655 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 B5MCH6 92 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
SMC4-213ENST00000472282 S100A12P80511 92 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 LINC00518Q8N0U6 118 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 OR13C6PQ8NH95 151 aa5.5□□□□□ -1.53
SMC4-213ENST00000472282 TRAV23DV6A0A075B6W5 121 aa5.49□□□□□ -1.53
SMC4-213ENST00000472282 SPRR1AP35321 89 aa5.49□□□□□ -1.53
SMC4-213ENST00000472282 C2orf91Q6ZV80 131 aa5.49□□□□□ -1.53
SMC4-213ENST00000472282 HIST1H4GQ99525 98 aa5.49□□□□□ -1.53
SMC4-213ENST00000472282 ETDCA0A1B0GVM5 59 aa5.48□□□□□ -1.53
SMC4-213ENST00000472282 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
SMC4-213ENST00000472282 HIGD1BQ9P298 99 aa5.48□□□□□ -1.53
SMC4-213ENST00000472282 A4D1N5 150 aa5.47□□□□□ -1.53
SMC4-213ENST00000472282 LOC105371267A0A1B0GV96 52 aa5.46□□□□□ -1.54
SMC4-213ENST00000472282 ZNF73O43830 326 aaPredicted RBP5.46□□□□□ -1.54
SMC4-213ENST00000472282 SMIM6P0DI80 62 aa5.46□□□□□ -1.54
SMC4-213ENST00000472282 PRR26Q8N8Z3 221 aa5.46□□□□□ -1.54
SMC4-213ENST00000472282 C12orf57Q99622 126 aa5.46□□□□□ -1.54
SMC4-213ENST00000472282 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
SMC4-213ENST00000472282 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.54
SMC4-213ENST00000472282 TRAV13-2A0A0B4J235 113 aa5.45□□□□□ -1.54
SMC4-213ENST00000472282 A6NDN8 102 aa5.45□□□□□ -1.54
SMC4-213ENST00000472282 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
SMC4-213ENST00000472282 LPAP08519 4548 aa5.44□□□□□ -1.54
SMC4-213ENST00000472282 Q6ZRX8 168 aa5.44□□□□□ -1.54
SMC4-213ENST00000472282 UQCR10Q9UDW1 63 aa5.44□□□□□ -1.54
SMC4-213ENST00000472282 TAL2Q16559 108 aa5.43□□□□□ -1.54
SMC4-213ENST00000472282 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
SMC4-213ENST00000472282 SMCR5Q8TEV8 140 aa5.43□□□□□ -1.54
SMC4-213ENST00000472282 Q9BRP9 147 aa5.43□□□□□ -1.54
SMC4-213ENST00000472282 PRO1933Q9H354 126 aa5.43□□□□□ -1.54
SMC4-213ENST00000472282 RPL13AP40429 203 aaKnown RBP5.42□□□□□ -1.54
SMC4-213ENST00000472282 HINT1P49773 126 aaPredicted RBP5.42□□□□□ -1.54
SMC4-213ENST00000472282 HSD52Q0P140 79 aa5.42□□□□□ -1.54
SMC4-213ENST00000472282 CEND1Q8N111 149 aa5.42□□□□□ -1.54
SMC4-213ENST00000472282 ERC2-IT1O76042 136 aa5.41□□□□□ -1.54
SMC4-213ENST00000472282 COX7BP24311 80 aa5.41□□□□□ -1.54
SMC4-213ENST00000472282 FXYD2P54710 66 aa5.41□□□□□ -1.54
SMC4-213ENST00000472282 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
SMC4-213ENST00000472282 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
SMC4-213ENST00000472282 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
SMC4-213ENST00000472282 A0A087X002 238 aa5.4□□□□□ -1.54
SMC4-213ENST00000472282 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
SMC4-213ENST00000472282 CFC1P0CG37 223 aa5.4□□□□□ -1.54
SMC4-213ENST00000472282 KRTAP5-11Q6L8G4 156 aa5.4□□□□□ -1.54
SMC4-213ENST00000472282 RAB37Q96AX2 223 aa5.4□□□□□ -1.54
SMC4-213ENST00000472282 SPRR4Q96PI1 79 aa5.4□□□□□ -1.54
SMC4-213ENST00000472282 ZNF706Q9Y5V0 76 aaPredicted RBP5.4□□□□□ -1.54
SMC4-213ENST00000472282 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
SMC4-213ENST00000472282 A0A0B4J2C4 111 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms