RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
UBXN11-213ENST00000472155 DNHD1Q96M86 4753 aa9.72□□□□□ -0.85
UBXN11-213ENST00000472155 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.85
UBXN11-213ENST00000472155 NKAPP1Q8N9T2 125 aa9.7□□□□□ -0.86
UBXN11-213ENST00000472155 Q6JHZ5 121 aa9.7□□□□□ -0.86
UBXN11-213ENST00000472155 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
UBXN11-213ENST00000472155 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
UBXN11-213ENST00000472155 FAM19A1Q7Z5A9 133 aa9.68□□□□□ -0.86
UBXN11-213ENST00000472155 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
UBXN11-213ENST00000472155 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
UBXN11-213ENST00000472155 DEFB105AQ8NG35 78 aa9.67□□□□□ -0.86
UBXN11-213ENST00000472155 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
UBXN11-213ENST00000472155 LOC110117498A0A087WWA1 95 aa9.66□□□□□ -0.86
UBXN11-213ENST00000472155 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
UBXN11-213ENST00000472155 HIST1H4AP62805 103 aaKnown RBP9.66□□□□□ -0.86
UBXN11-213ENST00000472155 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
UBXN11-213ENST00000472155 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
UBXN11-213ENST00000472155 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
UBXN11-213ENST00000472155 MEGF8Q7Z7M0 2845 aa9.65□□□□□ -0.86
UBXN11-213ENST00000472155 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.87
UBXN11-213ENST00000472155 F8WDY8 70 aa9.65□□□□□ -0.87
UBXN11-213ENST00000472155 Q9BRP9 147 aa9.64□□□□□ -0.87
UBXN11-213ENST00000472155 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
UBXN11-213ENST00000472155 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
UBXN11-213ENST00000472155 IGLV1-50A0A075B6I6 118 aa9.62□□□□□ -0.87
UBXN11-213ENST00000472155 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
UBXN11-213ENST00000472155 KRTAP4-16G5E9R7 235 aaPredicted RBP9.62□□□□□ -0.87
UBXN11-213ENST00000472155 ST20-AS1Q8NBB2 130 aa9.62□□□□□ -0.87
UBXN11-213ENST00000472155 IGKV2-24A0A0C4DH68 120 aa9.61□□□□□ -0.87
UBXN11-213ENST00000472155 RMI2Q96E14 147 aa9.61□□□□□ -0.87
UBXN11-213ENST00000472155 UBL5Q9BZL1 73 aa9.61□□□□□ -0.87
UBXN11-213ENST00000472155 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
UBXN11-213ENST00000472155 Q6ZVQ6 151 aa9.61□□□□□ -0.87
UBXN11-213ENST00000472155 Q8N377 158 aa9.61□□□□□ -0.87
UBXN11-213ENST00000472155 UQCRQO14949 82 aa9.6□□□□□ -0.87
UBXN11-213ENST00000472155 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
UBXN11-213ENST00000472155 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
UBXN11-213ENST00000472155 A0A096LNI7 61 aa9.6□□□□□ -0.87
UBXN11-213ENST00000472155 LINC01547P58512 204 aaPredicted RBP9.6□□□□□ -0.87
UBXN11-213ENST00000472155 UBE2DNLQ8IWF7 75 aa9.6□□□□□ -0.87
UBXN11-213ENST00000472155 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
UBXN11-213ENST00000472155 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.87
UBXN11-213ENST00000472155 HAMPP81172 84 aa9.59□□□□□ -0.87
UBXN11-213ENST00000472155 Q6ZRX8 168 aa9.58□□□□□ -0.88
UBXN11-213ENST00000472155 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
UBXN11-213ENST00000472155 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
UBXN11-213ENST00000472155 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
UBXN11-213ENST00000472155 PSCAO43653 123 aa9.57□□□□□ -0.88
UBXN11-213ENST00000472155 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
UBXN11-213ENST00000472155 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
UBXN11-213ENST00000472155 B9D2Q9BPU9 175 aa9.56□□□□□ -0.88
UBXN11-213ENST00000472155 SPRR1AP35321 89 aa9.56□□□□□ -0.88
UBXN11-213ENST00000472155 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
UBXN11-213ENST00000472155 DNAH2Q9P225 4427 aa9.55□□□□□ -0.88
UBXN11-213ENST00000472155 TGP01266 2768 aa9.55□□□□□ -0.88
UBXN11-213ENST00000472155 COX7CP15954 63 aa9.55□□□□□ -0.88
UBXN11-213ENST00000472155 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
UBXN11-213ENST00000472155 ATOX1O00244 68 aa9.53□□□□□ -0.88
UBXN11-213ENST00000472155 C3orf84H3BNL1 204 aa9.53□□□□□ -0.88
UBXN11-213ENST00000472155 H3BQ85 93 aa9.53□□□□□ -0.88
UBXN11-213ENST00000472155 PRYO14603 147 aa9.53□□□□□ -0.88
UBXN11-213ENST00000472155 A0A0G2JQZ4 141 aa9.52□□□□□ -0.89
UBXN11-213ENST00000472155 PDE6GP18545 87 aa9.52□□□□□ -0.89
UBXN11-213ENST00000472155 FUSP35637 526 aaKnown RBP eCLIP9.52□□□□□ -0.89
UBXN11-213ENST00000472155 UBE2BP63146 152 aa9.51□□□□□ -0.89
UBXN11-213ENST00000472155 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
UBXN11-213ENST00000472155 Q8N9L7 120 aa9.51□□□□□ -0.89
UBXN11-213ENST00000472155 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
UBXN11-213ENST00000472155 PRLHP81277 87 aa9.51□□□□□ -0.89
UBXN11-213ENST00000472155 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
UBXN11-213ENST00000472155 J3KT08 172 aa9.49□□□□□ -0.89
UBXN11-213ENST00000472155 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
UBXN11-213ENST00000472155 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
UBXN11-213ENST00000472155 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
UBXN11-213ENST00000472155 GHRHP01286 108 aa9.49□□□□□ -0.89
UBXN11-213ENST00000472155 CRYGAP11844 174 aa9.49□□□□□ -0.89
UBXN11-213ENST00000472155 PANO1I0J062 215 aa9.48□□□□□ -0.89
UBXN11-213ENST00000472155 PHF5AQ7RTV0 110 aaKnown RBP9.48□□□□□ -0.89
UBXN11-213ENST00000472155 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
UBXN11-213ENST00000472155 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
UBXN11-213ENST00000472155 SERP2Q8N6R1 65 aa9.47□□□□□ -0.89
UBXN11-213ENST00000472155 A0A1W2PNM2 257 aa9.46□□□□□ -0.89
UBXN11-213ENST00000472155 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
UBXN11-213ENST00000472155 TNP2Q05952 138 aa9.45□□□□□ -0.9
UBXN11-213ENST00000472155 FRAS1Q86XX4 4008 aa9.45□□□□□ -0.9
UBXN11-213ENST00000472155 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
UBXN11-213ENST00000472155 SMIM29Q86T20 159 aa9.44□□□□□ -0.9
UBXN11-213ENST00000472155 FBN3Q75N90 2809 aa9.43□□□□□ -0.9
UBXN11-213ENST00000472155 BPY2O14599 106 aa9.43□□□□□ -0.9
UBXN11-213ENST00000472155 CXCL6P80162 114 aa9.42□□□□□ -0.9
UBXN11-213ENST00000472155 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
UBXN11-213ENST00000472155 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
UBXN11-213ENST00000472155 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
UBXN11-213ENST00000472155 NREPQ16612 68 aa9.41□□□□□ -0.9
UBXN11-213ENST00000472155 OXTP01178 125 aa9.4□□□□□ -0.9
UBXN11-213ENST00000472155 DPH3Q96FX2 82 aa9.4□□□□□ -0.9
UBXN11-213ENST00000472155 C9orf163Q8N9P6 203 aa9.39□□□□□ -0.91
UBXN11-213ENST00000472155 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
UBXN11-213ENST00000472155 DNAH17Q9UFH2 4485 aa9.39□□□□□ -0.91
UBXN11-213ENST00000472155 DNAH8Q96JB1 4490 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms