RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 UBL5Q9BZL1 73 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 SPG11Q96JI7 2443 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 POLQO75417 2590 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 COL12A1Q99715 3063 aa1.62□□□□□ -2.15
CD46-213ENST00000471987 NBEAL2Q6ZNJ1 2754 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 INTS1Q8N201 2190 aaKnown RBP1.61□□□□□ -2.15
CD46-213ENST00000471987 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 LINC01546A6NGU7 62 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 H0Y9P7 68 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 J3QRE1 110 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 M0R3E3 92 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 CTSGP08311 255 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 PDZD2O15018 2839 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 ARFGEF3Q5TH69 2177 aa1.61□□□□□ -2.15
CD46-213ENST00000471987 TRAV21A0A0B4J279 112 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 K7EMI3 77 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 ENHOQ6UWT2 76 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 LAMA5O15230 3695 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 SPENQ96T58 3664 aaKnown RBP1.6□□□□□ -2.15
CD46-213ENST00000471987 ITPR1Q14643 2758 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 TNRC6CQ9HCJ0 1690 aaKnown RBP1.6□□□□□ -2.15
CD46-213ENST00000471987 TRIOO75962 3097 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 CEP192Q8TEP8 1941 aa1.6□□□□□ -2.15
CD46-213ENST00000471987 DNAJC13O75165 2243 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 PRRC2BQ5JSZ5 2229 aaKnown RBP1.59□□□□□ -2.15
CD46-213ENST00000471987 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 TRBV6-4A0A1B0GX49 114 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 JMJD7-PLA2G4BH0Y9G9 81 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 IGLV3-1P01715 115 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 COX6B1P14854 86 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 IL9P15248 144 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 ZNF137PP52743 207 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 C10orf113Q5VZT2 155 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 LINC00322Q6ZN03 302 aaPredicted RBP1.59□□□□□ -2.15
CD46-213ENST00000471987 TMEM14CQ9P0S9 112 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 R4GN34 69 aa1.59□□□□□ -2.15
CD46-213ENST00000471987 FRYLO94915 3013 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 SPTAN1Q13813 2472 aaKnown RBP1.58□□□□□ -2.16
CD46-213ENST00000471987 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
CD46-213ENST00000471987 IGIPA6NJ69 53 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
CD46-213ENST00000471987 COX17Q14061 63 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 WFDC9Q8NEX5 89 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
CD46-213ENST00000471987 CACNA1DQ01668 2161 aa1.58□□□□□ -2.16
CD46-213ENST00000471987 PRR14LQ5THK1 2151 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 PKD1L1Q8TDX9 2849 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 A0A087WTM6 91 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 SPINK7P58062 85 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 DEFB114Q30KQ6 69 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 WFDC10AQ9H1F0 79 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 CCL26Q9Y258 94 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 RYR2Q92736 4967 aa1.57□□□□□ -2.16
CD46-213ENST00000471987 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
CD46-213ENST00000471987 SPAG17Q6Q759 2223 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 CELSR1Q9NYQ6 3014 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 HERC2O95714 4834 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 NBDYA0A0U1RRE5 68 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 I3L3M4 83 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 M0R1W7 72 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 FXYD6P3P58550 94 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 CRYBG3Q68DQ2 2970 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 GAFA1Q96PS6 74 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 DOCK10Q96BY6 2186 aa1.56□□□□□ -2.16
CD46-213ENST00000471987 TLN1Q9Y490 2541 aaKnown RBP1.56□□□□□ -2.16
CD46-213ENST00000471987 COL4A2P08572 1712 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 GVINP1Q7Z2Y8 2422 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 JMJD1CQ15652 2540 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 TRGV4A0A0C4DH28 118 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 SPINK4O60575 86 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 RNASE3P12724 160 aaKnown RBP1.55□□□□□ -2.16
CD46-213ENST00000471987 RPL37AP61513 92 aaKnown RBP1.55□□□□□ -2.16
CD46-213ENST00000471987 FXYD3Q14802 87 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 ZNF625Q96I27 306 aaPredicted RBP1.55□□□□□ -2.16
CD46-213ENST00000471987 AKAP9Q99996 3911 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 IGSF10Q6WRI0 2623 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 NBEAL1Q6ZS30 2694 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 TENM1Q9UKZ4 2725 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 RP1P56715 2156 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 PTPRZ1P23471 2315 aaPredicted RBP1.55□□□□□ -2.16
CD46-213ENST00000471987 SPTBN2O15020 2390 aa1.55□□□□□ -2.16
CD46-213ENST00000471987 NDUFA4O00483 81 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 HRES1P13985 223 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 DEFB112Q30KQ8 113 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 C10orf55Q5SWW7 151 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 TMEM167BQ9NRX6 74 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 CHD7Q9P2D1 2997 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 ABCA4P78363 2273 aa1.54□□□□□ -2.16
CD46-213ENST00000471987 VWFP04275 2813 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.53□□□□□ -2.16
CD46-213ENST00000471987 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 A0A0G2JQZ4 141 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 IGKV2-29A2NJV5 120 aaPredicted RBP1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms