RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 Q6ZRP5 223 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 GAGE2DQ9UEU5 116 aa4.27□□□□□ -1.73
VAMP3-202ENST00000470357 IGLV5-52A0A0A0MRZ9 124 aa4.26□□□□□ -1.73
VAMP3-202ENST00000470357 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
VAMP3-202ENST00000470357 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
VAMP3-202ENST00000470357 NKAPP1Q8N9T2 125 aa4.26□□□□□ -1.73
VAMP3-202ENST00000470357 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
VAMP3-202ENST00000470357 XAGE1AQ9HD64 81 aa4.26□□□□□ -1.73
VAMP3-202ENST00000470357 M0R378 163 aa4.25□□□□□ -1.73
VAMP3-202ENST00000470357 COX6CP09669 75 aa4.25□□□□□ -1.73
VAMP3-202ENST00000470357 Q1RN00 199 aa4.25□□□□□ -1.73
VAMP3-202ENST00000470357 S100A7L2Q5SY68 101 aa4.25□□□□□ -1.73
VAMP3-202ENST00000470357 SRRM2Q9UQ35 2752 aaKnown RBP4.25□□□□□ -1.73
VAMP3-202ENST00000470357 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 IGLV5-37A0A075B6J1 123 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 K7ERJ3 54 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 TAX1BP3O14907 124 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 VPREB1P12018 145 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
VAMP3-202ENST00000470357 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
VAMP3-202ENST00000470357 SDIM1Q6ZPB5 146 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 OR13C6PQ8NH95 151 aa4.24□□□□□ -1.73
VAMP3-202ENST00000470357 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 A0A096LNI7 61 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 FABP2P12104 132 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 PSMB2P49721 201 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 LINC00337Q8N6G1 96 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
VAMP3-202ENST00000470357 H3BUT2 72 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 NCR3O14931 201 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 SNCGO76070 127 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 TSPAN13O95857 204 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 RPL28P46779 137 aaKnown RBP4.22□□□□□ -1.73
VAMP3-202ENST00000470357 VAMP3Q15836 100 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
VAMP3-202ENST00000470357 DPH3Q96FX2 82 aa4.22□□□□□ -1.73
VAMP3-202ENST00000470357 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 H0YGX0 51 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 H7C2G1 150 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 IGLV6-57P01721 117 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
VAMP3-202ENST00000470357 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.74
VAMP3-202ENST00000470357 TRAV23DV6A0A075B6W5 121 aa4.2□□□□□ -1.74
VAMP3-202ENST00000470357 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
VAMP3-202ENST00000470357 M0QXV9 152 aa4.2□□□□□ -1.74
VAMP3-202ENST00000470357 PRR3P79522 188 aaKnown RBP4.2□□□□□ -1.74
VAMP3-202ENST00000470357 GTF2H5Q6ZYL4 71 aa4.2□□□□□ -1.74
VAMP3-202ENST00000470357 FAM19A5Q7Z5A7 132 aaPredicted RBP4.2□□□□□ -1.74
VAMP3-202ENST00000470357 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
VAMP3-202ENST00000470357 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
VAMP3-202ENST00000470357 TRBV7-6A0A0J9YX20 115 aa4.19□□□□□ -1.74
VAMP3-202ENST00000470357 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
VAMP3-202ENST00000470357 Q8NDZ9 215 aa4.19□□□□□ -1.74
VAMP3-202ENST00000470357 C7orf33Q8WU49 177 aa4.19□□□□□ -1.74
VAMP3-202ENST00000470357 DIRC1Q969H9 104 aa4.19□□□□□ -1.74
VAMP3-202ENST00000470357 KCNQ1DNQ9H478 68 aa4.19□□□□□ -1.74
VAMP3-202ENST00000470357 IGLV1-50A0A075B6I6 118 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 A0A1B0GX51 115 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 A0A1W2PNN7 141 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 FAM168BA1KXE4 195 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 ZNF73O43830 326 aaPredicted RBP4.18□□□□□ -1.74
VAMP3-202ENST00000470357 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 LINC00167Q96N53 147 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 PLAC8Q9NZF1 115 aa4.18□□□□□ -1.74
VAMP3-202ENST00000470357 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
VAMP3-202ENST00000470357 A0A087WYN8 130 aa4.17□□□□□ -1.74
VAMP3-202ENST00000470357 SLC25A20O43772 301 aa4.17□□□□□ -1.74
VAMP3-202ENST00000470357 UBE2BP63146 152 aa4.17□□□□□ -1.74
VAMP3-202ENST00000470357 C6orf99Q4VX62 202 aa4.17□□□□□ -1.74
VAMP3-202ENST00000470357 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
VAMP3-202ENST00000470357 SPCS1Q9Y6A9 102 aa4.17□□□□□ -1.74
VAMP3-202ENST00000470357 A0A1B0GV90 55 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 ETDCA0A1B0GVM5 59 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 K7EP34 96 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 TRACP01848 142 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 Q6ZSA8 131 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 KRTAP7-1Q8IUC3 87 aa4.16□□□□□ -1.74
VAMP3-202ENST00000470357 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.74
VAMP3-202ENST00000470357 RPL37AP8A6NKH3 93 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 H3BQ85 93 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 LST1O00453 97 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 DNAL4O96015 105 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 INAFM2P0DMQ5 153 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 COX7BP24311 80 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 SPRR1AP35321 89 aa4.15□□□□□ -1.75
VAMP3-202ENST00000470357 ELOF1P60002 83 aaKnown RBP4.15□□□□□ -1.75
VAMP3-202ENST00000470357 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.75
VAMP3-202ENST00000470357 PANO1I0J062 215 aa4.14□□□□□ -1.75
VAMP3-202ENST00000470357 TCL1BO95988 128 aa4.14□□□□□ -1.75
VAMP3-202ENST00000470357 FUSP35637 526 aaKnown RBP eCLIP4.14□□□□□ -1.75
VAMP3-202ENST00000470357 KRTAP10-1P60331 282 aa4.14□□□□□ -1.75
VAMP3-202ENST00000470357 UBE2V1Q13404 147 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms