RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	LAMTOR3	Q9UHA4	124 aa		4.28	□□□□□ -1.72
LSM2-210	ENST00000470086	LOC389332	A0A1B0GUA5	103 aa		4.27	□□□□□ -1.73
LSM2-210	ENST00000470086	NDUFV3	P56181	108 aa	Known RBP	4.27	□□□□□ -1.73
LSM2-210	ENST00000470086	FABP9	Q0Z7S8	132 aa		4.27	□□□□□ -1.73
LSM2-210	ENST00000470086	MRPL51	Q4U2R6	128 aa	Known RBP	4.27	□□□□□ -1.73
LSM2-210	ENST00000470086	OCIAD2	Q56VL3	154 aa		4.27	□□□□□ -1.73
LSM2-210	ENST00000470086	LCE1A	Q5T7P2	110 aa		4.27	□□□□□ -1.73
LSM2-210	ENST00000470086	ERG28	Q9UKR5	140 aa		4.27	□□□□□ -1.73
LSM2-210	ENST00000470086		F8VRH5	84 aa		4.26	□□□□□ -1.73
LSM2-210	ENST00000470086	COA6	Q5JTJ3	125 aa	Known RBP	4.26	□□□□□ -1.73
LSM2-210	ENST00000470086	NKAPP1	Q8N9T2	125 aa		4.26	□□□□□ -1.73
LSM2-210	ENST00000470086	MANBAL	Q9NQG1	85 aa		4.26	□□□□□ -1.73
LSM2-210	ENST00000470086	NDUFA12	Q9UI09	145 aa		4.26	□□□□□ -1.73
LSM2-210	ENST00000470086	LAMTOR2	Q9Y2Q5	125 aa		4.26	□□□□□ -1.73
LSM2-210	ENST00000470086	MP68	P56378	58 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	RPS29	P62273	56 aa	Known RBP	4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	FAM19A2	Q8N3H0	131 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	SMIM2	Q9BVW6	85 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	OCR1	Q9BZK8	76 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	MED9	Q9NWA0	146 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	RBM12B-AS1	Q9P1G2	102 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	NAT8B	Q9UHF3	227 aa		4.25	□□□□□ -1.73
LSM2-210	ENST00000470086	HIGD1C	A8MV81	97 aa		4.24	□□□□□ -1.73
LSM2-210	ENST00000470086		C9JAW5	83 aa		4.24	□□□□□ -1.73
LSM2-210	ENST00000470086		J3QR89	54 aa		4.24	□□□□□ -1.73
LSM2-210	ENST00000470086	NPY	P01303	97 aa		4.24	□□□□□ -1.73
LSM2-210	ENST00000470086	LINC00483	Q53H64	154 aa		4.24	□□□□□ -1.73
LSM2-210	ENST00000470086	CDKN2A-AS1	Q9UH64	79 aa		4.24	□□□□□ -1.73
LSM2-210	ENST00000470086	IGHV6-1	A0A0B4J1U7	121 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086		A0A1B0GUT8	65 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	SMIM1	B2RUZ4	78 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086		M0R143	59 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	SLC25A20	O43772	301 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	SCGB1C2	P0DMR2	95 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	TCTE3	Q8IZS6	198 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	SMCR5	Q8TEV8	140 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	PRAC1	Q96KF2	57 aa		4.23	□□□□□ -1.73
LSM2-210	ENST00000470086	RPL37	P61927	97 aa	Known RBP	4.22	□□□□□ -1.73
LSM2-210	ENST00000470086	LYRM7	Q5U5X0	104 aa		4.22	□□□□□ -1.73
LSM2-210	ENST00000470086	TMEM141	Q96I45	108 aa		4.22	□□□□□ -1.73
LSM2-210	ENST00000470086	ERC2-IT1	O76042	136 aa		4.21	□□□□□ -1.74
LSM2-210	ENST00000470086	IGKV2-30	P06310	120 aa		4.21	□□□□□ -1.74
LSM2-210	ENST00000470086		Q6Q795	121 aa		4.21	□□□□□ -1.74
LSM2-210	ENST00000470086	FAM19A3	Q7Z5A8	133 aa		4.21	□□□□□ -1.74
LSM2-210	ENST00000470086	YPEL4	Q96NS1	127 aa		4.21	□□□□□ -1.74
LSM2-210	ENST00000470086	AMELX	Q99217	191 aa		4.21	□□□□□ -1.74
LSM2-210	ENST00000470086	TRBV24-1	A0A075B6N3	115 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	UMAD1	C9J7I0	102 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	IGLV6-57	P01721	117 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	IFI27	P40305	119 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	HERVK_113	P63121	156 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	FAM104B	Q5XKR9	115 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	LINC01551	Q86U37	167 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	PYGO1	Q9Y3Y4	419 aa		4.2	□□□□□ -1.74
LSM2-210	ENST00000470086	MDN1	Q9NU22	5596 aa		4.19	□□□□□ -1.74
LSM2-210	ENST00000470086		A8MWL6	223 aa		4.19	□□□□□ -1.74
LSM2-210	ENST00000470086		D6R8Y8	96 aa		4.19	□□□□□ -1.74
LSM2-210	ENST00000470086	RPL23	P62829	140 aa	Known RBP	4.19	□□□□□ -1.74
LSM2-210	ENST00000470086	C20orf78	Q9BR46	151 aa		4.19	□□□□□ -1.74
LSM2-210	ENST00000470086	CST9L	Q9H4G1	147 aa		4.19	□□□□□ -1.74
LSM2-210	ENST00000470086	DPM2	O94777	84 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	HERVK_113	P61574	105 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	HRCT1	Q6UXD1	115 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	COX7B2	Q8TF08	81 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	S100Z	Q8WXG8	99 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	IMUP	Q9GZP8	106 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	SND1-IT1	Q9HBX3	110 aa		4.18	□□□□□ -1.74
LSM2-210	ENST00000470086	TMEM218	A2RU14	115 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	TMEM250	H0YL14	139 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	ORMDL2	Q53FV1	153 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	C2orf66	Q6UXQ4	117 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	TIMM17A	Q99595	171 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	NAT8	Q9UHE5	227 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	CYSLTR1	Q9Y271	337 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM2-210	ENST00000470086		V9GYV3	84 aa		4.17	□□□□□ -1.74
LSM2-210	ENST00000470086	SPINK8	P0C7L1	97 aa		4.16	□□□□□ -1.74
LSM2-210	ENST00000470086	CXCL5	P42830	114 aa		4.16	□□□□□ -1.74
LSM2-210	ENST00000470086	TRAV9-1	A0A075B6T8	112 aa		4.15	□□□□□ -1.75
LSM2-210	ENST00000470086	CKS2	P33552	79 aa		4.15	□□□□□ -1.75
LSM2-210	ENST00000470086	SPRR1A	P35321	89 aa		4.15	□□□□□ -1.75
LSM2-210	ENST00000470086	ZNF345	Q14585	488 aa		4.15	□□□□□ -1.75
LSM2-210	ENST00000470086		Q9BRP9	147 aa		4.15	□□□□□ -1.75
LSM2-210	ENST00000470086	IGIP	A6NJ69	53 aa		4.14	□□□□□ -1.75
LSM2-210	ENST00000470086		C9JQL5	133 aa		4.14	□□□□□ -1.75
LSM2-210	ENST00000470086	PPP1R17	O96001	155 aa		4.14	□□□□□ -1.75
LSM2-210	ENST00000470086	KRTAP10-10	P60014	251 aa		4.13	□□□□□ -1.75
LSM2-210	ENST00000470086	LINC00299	Q6ZSB3	139 aa		4.13	□□□□□ -1.75
LSM2-210	ENST00000470086	SSBP3-AS1	Q7Z2R9	100 aa		4.13	□□□□□ -1.75
LSM2-210	ENST00000470086	LINC00862	A6NCI5	91 aa		4.12	□□□□□ -1.75
LSM2-210	ENST00000470086	C9orf153	Q5TBE3	101 aa		4.12	□□□□□ -1.75
LSM2-210	ENST00000470086	GTF2H5	Q6ZYL4	71 aa		4.12	□□□□□ -1.75
LSM2-210	ENST00000470086	NCR3	O14931	201 aa		4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	NDUFA6	P56556	154 aa		4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	COL5A1-AS1	Q5SY13	56 aa		4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	MRPL54	Q6P161	138 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	TOMM6	Q96B49	74 aa		4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	ZNF625	Q96I27	306 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	OSTC	Q9NRP0	149 aa		4.11	□□□□□ -1.75
LSM2-210	ENST00000470086	KMT2D	O14686	5537 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 308.3 ms