RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 SMIM13P0DJ93 91 aa6.93□□□□□ -1.3
TRAPPC12-216ENST00000469400 C9orf153Q5TBE3 101 aa6.93□□□□□ -1.3
TRAPPC12-216ENST00000469400 Q9BRP9 147 aa6.93□□□□□ -1.3
TRAPPC12-216ENST00000469400 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
TRAPPC12-216ENST00000469400 HSBP1O75506 76 aa6.92□□□□□ -1.3
TRAPPC12-216ENST00000469400 URB1-AS1Q96HZ7 61 aa6.92□□□□□ -1.3
TRAPPC12-216ENST00000469400 HIST1H2BLQ99880 126 aa6.92□□□□□ -1.3
TRAPPC12-216ENST00000469400 S100A12P80511 92 aa6.91□□□□□ -1.3
TRAPPC12-216ENST00000469400 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
TRAPPC12-216ENST00000469400 MEIG1Q5JSS6 88 aa6.9□□□□□ -1.3
TRAPPC12-216ENST00000469400 FABP4P15090 132 aa6.89□□□□□ -1.31
TRAPPC12-216ENST00000469400 Q6ZRX8 168 aa6.89□□□□□ -1.31
TRAPPC12-216ENST00000469400 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC12-216ENST00000469400 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
TRAPPC12-216ENST00000469400 HBDP02042 147 aa6.88□□□□□ -1.31
TRAPPC12-216ENST00000469400 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
TRAPPC12-216ENST00000469400 DDTP30046 118 aa6.87□□□□□ -1.31
TRAPPC12-216ENST00000469400 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
TRAPPC12-216ENST00000469400 SMIM6P0DI80 62 aa6.86□□□□□ -1.31
TRAPPC12-216ENST00000469400 AKR1D1P51857 326 aa6.86□□□□□ -1.31
TRAPPC12-216ENST00000469400 HSPB8Q9UJY1 196 aa6.86□□□□□ -1.31
TRAPPC12-216ENST00000469400 CHTOPQ9Y3Y2 248 aaKnown RBP6.86□□□□□ -1.31
TRAPPC12-216ENST00000469400 LEPROTL1O95214 131 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 IGLV6-57P01721 117 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 HERV-K104P63124 156 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 HRCT1Q6UXD1 115 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 LINC00518Q8N0U6 118 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 ST20-AS1Q8NBB2 130 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
TRAPPC12-216ENST00000469400 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
TRAPPC12-216ENST00000469400 LINC00587B1AMM8 73 aa6.84□□□□□ -1.31
TRAPPC12-216ENST00000469400 JOSD1Q15040 202 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC12-216ENST00000469400 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
TRAPPC12-216ENST00000469400 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
TRAPPC12-216ENST00000469400 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
TRAPPC12-216ENST00000469400 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
TRAPPC12-216ENST00000469400 USH2AO75445 5202 aa6.81□□□□□ -1.32
TRAPPC12-216ENST00000469400 C3orf79P0CE67 100 aa6.81□□□□□ -1.32
TRAPPC12-216ENST00000469400 PYY3Q5JQD4 70 aa6.81□□□□□ -1.32
TRAPPC12-216ENST00000469400 MYMXA0A1B0GTQ4 84 aa6.8□□□□□ -1.32
TRAPPC12-216ENST00000469400 SYS1-DBNDD2H3BUS1 97 aa6.8□□□□□ -1.32
TRAPPC12-216ENST00000469400 KRTDAPP60985 99 aa6.8□□□□□ -1.32
TRAPPC12-216ENST00000469400 PET117Q6UWS5 81 aa6.8□□□□□ -1.32
TRAPPC12-216ENST00000469400 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-216ENST00000469400 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
TRAPPC12-216ENST00000469400 TRAV12-1A0A0B4J245 112 aa6.79□□□□□ -1.32
TRAPPC12-216ENST00000469400 C20orf202A1L168 122 aa6.79□□□□□ -1.32
TRAPPC12-216ENST00000469400 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
TRAPPC12-216ENST00000469400 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
TRAPPC12-216ENST00000469400 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
TRAPPC12-216ENST00000469400 ZNF73O43830 326 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC12-216ENST00000469400 SCGB1D1O95968 90 aa6.77□□□□□ -1.33
TRAPPC12-216ENST00000469400 SPRR1BP22528 89 aa6.77□□□□□ -1.33
TRAPPC12-216ENST00000469400 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
TRAPPC12-216ENST00000469400 C12orf57Q99622 126 aa6.77□□□□□ -1.33
TRAPPC12-216ENST00000469400 SLC25A34Q6PIV7 304 aa6.76□□□□□ -1.33
TRAPPC12-216ENST00000469400 NDUFC2O95298 119 aa6.75□□□□□ -1.33
TRAPPC12-216ENST00000469400 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
TRAPPC12-216ENST00000469400 MIEN1Q9BRT3 115 aa6.75□□□□□ -1.33
TRAPPC12-216ENST00000469400 H7C2G1 150 aa6.74□□□□□ -1.33
TRAPPC12-216ENST00000469400 CD164Q04900 197 aa6.74□□□□□ -1.33
TRAPPC12-216ENST00000469400 LAMTOR3Q9UHA4 124 aa6.74□□□□□ -1.33
TRAPPC12-216ENST00000469400 HINT1P49773 126 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC12-216ENST00000469400 C1orf195Q5TG92 126 aa6.73□□□□□ -1.33
TRAPPC12-216ENST00000469400 Q5XG85 94 aa6.72□□□□□ -1.33
TRAPPC12-216ENST00000469400 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
TRAPPC12-216ENST00000469400 LEPROTO15243 131 aa6.71□□□□□ -1.34
TRAPPC12-216ENST00000469400 EIF4EBP3O60516 100 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC12-216ENST00000469400 PLNP26678 52 aa6.71□□□□□ -1.34
TRAPPC12-216ENST00000469400 Q6Q795 121 aa6.71□□□□□ -1.34
TRAPPC12-216ENST00000469400 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
TRAPPC12-216ENST00000469400 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC12-216ENST00000469400 H0Y8G0 127 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 DPM2O94777 84 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 CFC1P0CG37 223 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 Q1RN00 199 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 VAMP8Q9BV40 100 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 DHRS4-AS1Q9P1J3 65 aa6.7□□□□□ -1.34
TRAPPC12-216ENST00000469400 J3QQQ9 107 aa6.69□□□□□ -1.34
TRAPPC12-216ENST00000469400 IGKCP01834 107 aa6.69□□□□□ -1.34
TRAPPC12-216ENST00000469400 NPC2P61916 151 aa6.69□□□□□ -1.34
TRAPPC12-216ENST00000469400 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
TRAPPC12-216ENST00000469400 HSBP1L1C9JCN9 74 aa6.68□□□□□ -1.34
TRAPPC12-216ENST00000469400 CBY1Q9Y3M2 126 aa6.68□□□□□ -1.34
TRAPPC12-216ENST00000469400 NMUP48645 174 aa6.67□□□□□ -1.34
TRAPPC12-216ENST00000469400 ADAMTSL4-AS1Q5T5F5 129 aa6.67□□□□□ -1.34
TRAPPC12-216ENST00000469400 SMIM29Q86T20 159 aa6.67□□□□□ -1.34
TRAPPC12-216ENST00000469400 ATOH7Q8N100 152 aa6.67□□□□□ -1.34
TRAPPC12-216ENST00000469400 PMCHL2Q9BQD1 86 aa6.67□□□□□ -1.34
TRAPPC12-216ENST00000469400 TSTD3H0UI37 97 aa6.66□□□□□ -1.34
TRAPPC12-216ENST00000469400 TAL2Q16559 108 aa6.66□□□□□ -1.34
TRAPPC12-216ENST00000469400 DEFB105AQ8NG35 78 aa6.66□□□□□ -1.34
TRAPPC12-216ENST00000469400 PAM16Q9Y3D7 125 aa6.66□□□□□ -1.34
TRAPPC12-216ENST00000469400 A0A0G2JQZ4 141 aa6.65□□□□□ -1.34
TRAPPC12-216ENST00000469400 LGALS3P17931 250 aaKnown RBP6.65□□□□□ -1.34
TRAPPC12-216ENST00000469400 SPATA45Q537H7 98 aa6.65□□□□□ -1.34
TRAPPC12-216ENST00000469400 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
TRAPPC12-216ENST00000469400 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
TRAPPC12-216ENST00000469400 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms