RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-208	ENST00000469356	ZNF861P	O60384	105 aa		14.07	□□□□□ -0.16
SREBF1-208	ENST00000469356	HSD52	Q0P140	79 aa		14.07	□□□□□ -0.16
SREBF1-208	ENST00000469356	CEND1	Q8N111	149 aa		14.07	□□□□□ -0.16
SREBF1-208	ENST00000469356	KRTAP4-5	Q9BYR2	181 aa		14.07	□□□□□ -0.16
SREBF1-208	ENST00000469356	PRO1933	Q9H354	126 aa		14.07	□□□□□ -0.16
SREBF1-208	ENST00000469356	TSTD3	H0UI37	97 aa		14.06	□□□□□ -0.16
SREBF1-208	ENST00000469356	DIRC1	Q969H9	104 aa		14.06	□□□□□ -0.16
SREBF1-208	ENST00000469356	SPRR1A	P35321	89 aa		14.04	□□□□□ -0.16
SREBF1-208	ENST00000469356		H0Y9J4	135 aa		14.02	□□□□□ -0.17
SREBF1-208	ENST00000469356	ZNF73	O43830	326 aa	Predicted RBP	14.02	□□□□□ -0.17
SREBF1-208	ENST00000469356	RAB37	Q96AX2	223 aa		14.01	□□□□□ -0.17
SREBF1-208	ENST00000469356	SRRM2	Q9UQ35	2752 aa	Known RBP	13.99	□□□□□ -0.17
SREBF1-208	ENST00000469356	PRLH	P81277	87 aa		13.97	□□□□□ -0.17
SREBF1-208	ENST00000469356		A0A0B4J2C4	111 aa		13.96	□□□□□ -0.17
SREBF1-208	ENST00000469356	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.96	□□□□□ -0.17
SREBF1-208	ENST00000469356	KRTAP13-1	Q8IUC0	172 aa		13.96	□□□□□ -0.17
SREBF1-208	ENST00000469356		B5MCH6	92 aa		13.95	□□□□□ -0.18
SREBF1-208	ENST00000469356	CFC1B	P0CG36	223 aa		13.95	□□□□□ -0.18
SREBF1-208	ENST00000469356	CFC1	P0CG37	223 aa		13.95	□□□□□ -0.18
SREBF1-208	ENST00000469356	RPL13A	P40429	203 aa	Known RBP	13.94	□□□□□ -0.18
SREBF1-208	ENST00000469356	TRBV7-6	A0A0J9YX20	115 aa		13.93	□□□□□ -0.18
SREBF1-208	ENST00000469356	FXYD2	P54710	66 aa		13.93	□□□□□ -0.18
SREBF1-208	ENST00000469356	C6orf99	Q4VX62	202 aa		13.93	□□□□□ -0.18
SREBF1-208	ENST00000469356	HIGD2A	Q9BW72	106 aa		13.93	□□□□□ -0.18
SREBF1-208	ENST00000469356	PKHD1L1	Q86WI1	4243 aa		13.92	□□□□□ -0.18
SREBF1-208	ENST00000469356	VAMP3	Q15836	100 aa		13.92	□□□□□ -0.18
SREBF1-208	ENST00000469356		Q6ZRX8	168 aa		13.92	□□□□□ -0.18
SREBF1-208	ENST00000469356	COX7B	P24311	80 aa		13.91	□□□□□ -0.18
SREBF1-208	ENST00000469356	SMIM11B	Q8TCY0	68 aa		13.91	□□□□□ -0.18
SREBF1-208	ENST00000469356		A0A1B0GWB2	263 aa		13.9	□□□□□ -0.18
SREBF1-208	ENST00000469356		M0R143	59 aa		13.9	□□□□□ -0.18
SREBF1-208	ENST00000469356	PRO1854	Q9UHT4	67 aa		13.9	□□□□□ -0.18
SREBF1-208	ENST00000469356	CTAG1A	P78358	180 aa		13.9	□□□□□ -0.19
SREBF1-208	ENST00000469356	OXT	P01178	125 aa		13.89	□□□□□ -0.19
SREBF1-208	ENST00000469356	NHP2	Q9NX24	153 aa	Known RBP	13.89	□□□□□ -0.19
SREBF1-208	ENST00000469356	DHRS4-AS1	Q9P1J3	65 aa		13.88	□□□□□ -0.19
SREBF1-208	ENST00000469356	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.88	□□□□□ -0.19
SREBF1-208	ENST00000469356	FLG2	Q5D862	2391 aa	Predicted RBP	13.87	□□□□□ -0.19
SREBF1-208	ENST00000469356	ELOF1	P60002	83 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-208	ENST00000469356		Q1RN00	199 aa		13.87	□□□□□ -0.19
SREBF1-208	ENST00000469356	BVES-AS1	Q5T3Y7	98 aa		13.87	□□□□□ -0.19
SREBF1-208	ENST00000469356	SMCR5	Q8TEV8	140 aa		13.87	□□□□□ -0.19
SREBF1-208	ENST00000469356		H7C2G1	150 aa		13.86	□□□□□ -0.19
SREBF1-208	ENST00000469356	ABCA13	Q86UQ4	5058 aa		13.84	□□□□□ -0.19
SREBF1-208	ENST00000469356	SLC25A20	O43772	301 aa		13.82	□□□□□ -0.2
SREBF1-208	ENST00000469356		Q9BRP9	147 aa		13.82	□□□□□ -0.2
SREBF1-208	ENST00000469356	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.81	□□□□□ -0.2
SREBF1-208	ENST00000469356	SNCG	O76070	127 aa		13.79	□□□□□ -0.2
SREBF1-208	ENST00000469356	LINC01600	Q96MT4	127 aa		13.79	□□□□□ -0.2
SREBF1-208	ENST00000469356		H0YGX0	51 aa		13.77	□□□□□ -0.21
SREBF1-208	ENST00000469356	SPRR4	Q96PI1	79 aa		13.76	□□□□□ -0.21
SREBF1-208	ENST00000469356		J3QL48	77 aa		13.75	□□□□□ -0.21
SREBF1-208	ENST00000469356	FAM229B	Q4G0N7	80 aa		13.75	□□□□□ -0.21
SREBF1-208	ENST00000469356		K7ERJ3	54 aa		13.74	□□□□□ -0.21
SREBF1-208	ENST00000469356	ERC2-IT1	O76042	136 aa		13.74	□□□□□ -0.21
SREBF1-208	ENST00000469356	COX6C	P09669	75 aa		13.74	□□□□□ -0.21
SREBF1-208	ENST00000469356	KRTAP1-4	P0C5Y4	121 aa		13.74	□□□□□ -0.21
SREBF1-208	ENST00000469356	PSMB2	P49721	201 aa		13.74	□□□□□ -0.21
SREBF1-208	ENST00000469356	CRYGA	P11844	174 aa		13.73	□□□□□ -0.21
SREBF1-208	ENST00000469356	LINC00575	Q6W349	94 aa		13.71	□□□□□ -0.21
SREBF1-208	ENST00000469356	hADV29S1	A0JD25	119 aa		13.7	□□□□□ -0.22
SREBF1-208	ENST00000469356	GAGE2A	Q6NT46	116 aa		13.7	□□□□□ -0.22
SREBF1-208	ENST00000469356	TSPAN13	O95857	204 aa		13.68	□□□□□ -0.22
SREBF1-208	ENST00000469356	BATF	Q16520	125 aa		13.68	□□□□□ -0.22
SREBF1-208	ENST00000469356	PRR26	Q8N8Z3	221 aa		13.67	□□□□□ -0.22
SREBF1-208	ENST00000469356	FAT3	Q8TDW7	4589 aa		13.67	□□□□□ -0.22
SREBF1-208	ENST00000469356	LINC00483	Q53H64	154 aa		13.66	□□□□□ -0.22
SREBF1-208	ENST00000469356		A0A1B0GX51	115 aa		13.65	□□□□□ -0.22
SREBF1-208	ENST00000469356	TRIAP1	O43715	76 aa		13.65	□□□□□ -0.22
SREBF1-208	ENST00000469356	ANAPC11	Q9NYG5	84 aa		13.65	□□□□□ -0.22
SREBF1-208	ENST00000469356	ST20-AS1	Q8NBB2	130 aa		13.64	□□□□□ -0.23
SREBF1-208	ENST00000469356	MYCBP2	O75592	4640 aa		13.64	□□□□□ -0.23
SREBF1-208	ENST00000469356	PCLO	Q9Y6V0	5065 aa		13.64	□□□□□ -0.23
SREBF1-208	ENST00000469356	SCGB1C2	P0DMR2	95 aa		13.64	□□□□□ -0.23
SREBF1-208	ENST00000469356	KRTAP10-8	P60410	259 aa		13.64	□□□□□ -0.23
SREBF1-208	ENST00000469356	TEX49	A0A1B0GTD5	131 aa		13.63	□□□□□ -0.23
SREBF1-208	ENST00000469356	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-208	ENST00000469356	TYMSOS	Q8TAI1	123 aa		13.63	□□□□□ -0.23
SREBF1-208	ENST00000469356	LRP1	Q07954	4544 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-208	ENST00000469356	GHRH	P01286	108 aa		13.62	□□□□□ -0.23
SREBF1-208	ENST00000469356	SPRR1B	P22528	89 aa		13.62	□□□□□ -0.23
SREBF1-208	ENST00000469356	DEFB105A	Q8NG35	78 aa		13.62	□□□□□ -0.23
SREBF1-208	ENST00000469356		A0A087X002	238 aa		13.61	□□□□□ -0.23
SREBF1-208	ENST00000469356	OCIAD2	Q56VL3	154 aa		13.6	□□□□□ -0.23
SREBF1-208	ENST00000469356	LAMTOR3	Q9UHA4	124 aa		13.6	□□□□□ -0.23
SREBF1-208	ENST00000469356		Q6ZQY7	126 aa		13.59	□□□□□ -0.23
SREBF1-208	ENST00000469356	IGLV5-48	A0A075B6I7	105 aa		13.58	□□□□□ -0.24
SREBF1-208	ENST00000469356	MT1HL1	P0DM35	61 aa		13.58	□□□□□ -0.24
SREBF1-208	ENST00000469356	LYRM7	Q5U5X0	104 aa		13.57	□□□□□ -0.24
SREBF1-208	ENST00000469356	DNAL4	O96015	105 aa		13.56	□□□□□ -0.24
SREBF1-208	ENST00000469356	PPDPFL	Q8WWR9	84 aa		13.56	□□□□□ -0.24
SREBF1-208	ENST00000469356	PCP4L1	A6NKN8	68 aa		13.55	□□□□□ -0.24
SREBF1-208	ENST00000469356	KRTAP13-2	Q52LG2	175 aa		13.54	□□□□□ -0.24
SREBF1-208	ENST00000469356	CLEC2B	Q92478	149 aa		13.54	□□□□□ -0.24
SREBF1-208	ENST00000469356	FAM218A	Q96MZ4	157 aa		13.54	□□□□□ -0.24
SREBF1-208	ENST00000469356	IGLV9-49	A0A0B4J1Y8	123 aa		13.53	□□□□□ -0.24
SREBF1-208	ENST00000469356	SSBP3-AS1	Q7Z2R9	100 aa		13.53	□□□□□ -0.24
SREBF1-208	ENST00000469356		H3BQ85	93 aa		13.52	□□□□□ -0.25
SREBF1-208	ENST00000469356	C3orf22	Q8N5N4	141 aa		13.52	□□□□□ -0.25
SREBF1-208	ENST00000469356	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms