RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 VAMP8Q9BV40 100 aa4.17□□□□□ -1.74
SNRPD3-205ENST00000468770 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
SNRPD3-205ENST00000468770 LOC107984156A0A0G2JMH3 177 aa4.16□□□□□ -1.74
SNRPD3-205ENST00000468770 KRTDAPP60985 99 aa4.16□□□□□ -1.74
SNRPD3-205ENST00000468770 C4orf48Q5BLP8 95 aa4.16□□□□□ -1.74
SNRPD3-205ENST00000468770 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
SNRPD3-205ENST00000468770 ARL17AQ8IVW1 177 aa4.16□□□□□ -1.74
SNRPD3-205ENST00000468770 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 TMEM238LA0A1B0GVL6 79 aa4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 HSBP1L1C9JCN9 74 aa4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 KRTAP4-16G5E9R7 235 aaPredicted RBP4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 PPDPFQ9H3Y8 114 aa4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
SNRPD3-205ENST00000468770 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 B5MCH6 92 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 E9PLD3 99 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 NDUFC2O95298 119 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 PCP4P48539 62 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
SNRPD3-205ENST00000468770 A0A0J9YXY3 114 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 M0R143 59 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 NPC2P61916 151 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 ADAMTSL4-AS1Q5T5F5 129 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 Q8NBF4 154 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 CDIP1Q9H305 208 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 MUC2Q02817 5179 aa4.13□□□□□ -1.75
SNRPD3-205ENST00000468770 ERC2-IT1O76042 136 aa4.12□□□□□ -1.75
SNRPD3-205ENST00000468770 IGLV6-57P01721 117 aa4.12□□□□□ -1.75
SNRPD3-205ENST00000468770 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
SNRPD3-205ENST00000468770 PET117Q6UWS5 81 aa4.12□□□□□ -1.75
SNRPD3-205ENST00000468770 Q6ZRX8 168 aa4.12□□□□□ -1.75
SNRPD3-205ENST00000468770 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 ZNF73O43830 326 aaPredicted RBP4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 EIF4EBP3O60516 100 aaPredicted RBP4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 SPINK1P00995 79 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 HINT1P49773 126 aaPredicted RBP4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 C21orf62-AS1Q17RA5 79 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 SPATA45Q537H7 98 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 LINC01545Q5VT33 79 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 SOSTDC1Q6X4U4 206 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 Q9BRP9 147 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 UQCR10Q9UDW1 63 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
SNRPD3-205ENST00000468770 MOBPQ13875 183 aa4.1□□□□□ -1.75
SNRPD3-205ENST00000468770 SSBP3-AS1Q7Z2R9 100 aa4.1□□□□□ -1.75
SNRPD3-205ENST00000468770 OR13C6PQ8NH95 151 aa4.1□□□□□ -1.75
SNRPD3-205ENST00000468770 LINC00308Q8TCZ7 52 aa4.1□□□□□ -1.75
SNRPD3-205ENST00000468770 C14orf144Q96I85 54 aa4.1□□□□□ -1.75
SNRPD3-205ENST00000468770 SPANXCQ9NY87 97 aa4.1□□□□□ -1.75
SNRPD3-205ENST00000468770 A0A1B0GV90 55 aa4.09□□□□□ -1.75
SNRPD3-205ENST00000468770 ZNF815PA8K554 130 aa4.09□□□□□ -1.75
SNRPD3-205ENST00000468770 TIMM17BO60830 172 aa4.09□□□□□ -1.75
SNRPD3-205ENST00000468770 C3orf79P0CE67 100 aa4.09□□□□□ -1.75
SNRPD3-205ENST00000468770 BATFQ16520 125 aa4.09□□□□□ -1.75
SNRPD3-205ENST00000468770 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
SNRPD3-205ENST00000468770 COL5A1-AS1Q5SY13 56 aa4.08□□□□□ -1.76
SNRPD3-205ENST00000468770 LITAFQ99732 161 aa4.08□□□□□ -1.76
SNRPD3-205ENST00000468770 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
SNRPD3-205ENST00000468770 C9orf153Q5TBE3 101 aa4.07□□□□□ -1.76
SNRPD3-205ENST00000468770 SCGB1D4Q6XE38 83 aa4.07□□□□□ -1.76
SNRPD3-205ENST00000468770 ST20-AS1Q8NBB2 130 aa4.07□□□□□ -1.76
SNRPD3-205ENST00000468770 SPANXDQ9BXN6 97 aa4.07□□□□□ -1.76
SNRPD3-205ENST00000468770 RPS29P62273 56 aaKnown RBP4.06□□□□□ -1.76
SNRPD3-205ENST00000468770 COPS9Q8WXC6 57 aa4.06□□□□□ -1.76
SNRPD3-205ENST00000468770 DHRS4-AS1Q9P1J3 65 aa4.06□□□□□ -1.76
SNRPD3-205ENST00000468770 SLC25A20O43772 301 aa4.05□□□□□ -1.76
SNRPD3-205ENST00000468770 SLC25A34Q6PIV7 304 aa4.05□□□□□ -1.76
SNRPD3-205ENST00000468770 ATOH7Q8N100 152 aa4.05□□□□□ -1.76
SNRPD3-205ENST00000468770 Q8N377 158 aa4.05□□□□□ -1.76
SNRPD3-205ENST00000468770 COX7BP24311 80 aa4.04□□□□□ -1.76
SNRPD3-205ENST00000468770 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
SNRPD3-205ENST00000468770 C6orf99Q4VX62 202 aa4.04□□□□□ -1.76
SNRPD3-205ENST00000468770 LAMTOR3Q9UHA4 124 aa4.04□□□□□ -1.76
SNRPD3-205ENST00000468770 A6NDN8 102 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 IFITM1P13164 125 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 SPRR1BP22528 89 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 TAL2Q16559 108 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 Q6ZVH6 145 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 DEFB105AQ8NG35 78 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 SNHG12Q9BXW3 62 aa4.03□□□□□ -1.76
SNRPD3-205ENST00000468770 A6NJY4 79 aa4.02□□□□□ -1.77
SNRPD3-205ENST00000468770 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
SNRPD3-205ENST00000468770 PCP2Q8IVA1 136 aa4.02□□□□□ -1.77
SNRPD3-205ENST00000468770 MUSTN1Q8IVN3 82 aa4.02□□□□□ -1.77
SNRPD3-205ENST00000468770 TRBV7-6A0A0J9YX20 115 aa4.01□□□□□ -1.77
SNRPD3-205ENST00000468770 TEX49A0A1B0GTD5 131 aa4.01□□□□□ -1.77
SNRPD3-205ENST00000468770 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
SNRPD3-205ENST00000468770 Q1RN00 199 aa4.01□□□□□ -1.77
SNRPD3-205ENST00000468770 TRAV13-2A0A0B4J235 113 aa4□□□□□ -1.77
SNRPD3-205ENST00000468770 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
SNRPD3-205ENST00000468770 A0A1B0GWB2 263 aa4□□□□□ -1.77
SNRPD3-205ENST00000468770 DLEU1O43261 78 aa4□□□□□ -1.77
SNRPD3-205ENST00000468770 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
SNRPD3-205ENST00000468770 LIMD2Q9BT23 127 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms