RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
SMC4-209ENST00000468653 IGLV5-52A0A0A0MRZ9 124 aa12.05□□□□□ -0.48
SMC4-209ENST00000468653 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
SMC4-209ENST00000468653 DPH3Q96FX2 82 aa12.04□□□□□ -0.48
SMC4-209ENST00000468653 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
SMC4-209ENST00000468653 PRYO14603 147 aa12.03□□□□□ -0.48
SMC4-209ENST00000468653 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
SMC4-209ENST00000468653 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
SMC4-209ENST00000468653 hADV29S1A0JD25 119 aa12.02□□□□□ -0.48
SMC4-209ENST00000468653 OCIAD2Q56VL3 154 aa12.02□□□□□ -0.49
SMC4-209ENST00000468653 DNAH2Q9P225 4427 aa12□□□□□ -0.49
SMC4-209ENST00000468653 LCE6AA0A183 80 aa12□□□□□ -0.49
SMC4-209ENST00000468653 PANO1I0J062 215 aa12□□□□□ -0.49
SMC4-209ENST00000468653 ORMDL1Q9P0S3 153 aa12□□□□□ -0.49
SMC4-209ENST00000468653 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
SMC4-209ENST00000468653 LINC00528Q8N1L1 170 aa11.98□□□□□ -0.49
SMC4-209ENST00000468653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
SMC4-209ENST00000468653 PHF5AQ7RTV0 110 aaKnown RBP11.97□□□□□ -0.49
SMC4-209ENST00000468653 ETDCA0A1B0GVM5 59 aa11.97□□□□□ -0.49
SMC4-209ENST00000468653 SPRR1AP35321 89 aa11.97□□□□□ -0.49
SMC4-209ENST00000468653 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
SMC4-209ENST00000468653 K7ERU9 68 aa11.96□□□□□ -0.49
SMC4-209ENST00000468653 UBE2BP63146 152 aa11.96□□□□□ -0.49
SMC4-209ENST00000468653 REG3GQ6UW15 175 aa11.96□□□□□ -0.49
SMC4-209ENST00000468653 KRTAP4-16G5E9R7 235 aaPredicted RBP11.94□□□□□ -0.5
SMC4-209ENST00000468653 TEX49A0A1B0GTD5 131 aa11.93□□□□□ -0.5
SMC4-209ENST00000468653 B5MCH6 92 aa11.93□□□□□ -0.5
SMC4-209ENST00000468653 Q6ZQY7 126 aa11.93□□□□□ -0.5
SMC4-209ENST00000468653 J3QR89 54 aa11.92□□□□□ -0.5
SMC4-209ENST00000468653 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
SMC4-209ENST00000468653 Q6ZRX8 168 aa11.92□□□□□ -0.5
SMC4-209ENST00000468653 DNAH17Q9UFH2 4485 aa11.92□□□□□ -0.5
SMC4-209ENST00000468653 TMEM256-PLSCR3K7ERE1 68 aa11.92□□□□□ -0.5
SMC4-209ENST00000468653 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
SMC4-209ENST00000468653 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.91□□□□□ -0.5
SMC4-209ENST00000468653 DHRS4-AS1Q9P1J3 65 aa11.9□□□□□ -0.51
SMC4-209ENST00000468653 HECTD4Q9Y4D8 3996 aa11.89□□□□□ -0.51
SMC4-209ENST00000468653 EPM2AB3EWF7 344 aa11.89□□□□□ -0.51
SMC4-209ENST00000468653 HYDINQ4G0P3 5121 aa11.88□□□□□ -0.51
SMC4-209ENST00000468653 H3BQ85 93 aa11.87□□□□□ -0.51
SMC4-209ENST00000468653 KRTAP11-1Q8IUC1 163 aa11.87□□□□□ -0.51
SMC4-209ENST00000468653 GHRHP01286 108 aa11.87□□□□□ -0.51
SMC4-209ENST00000468653 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
SMC4-209ENST00000468653 Q9BRP9 147 aa11.87□□□□□ -0.51
SMC4-209ENST00000468653 FRAS1Q86XX4 4008 aa11.86□□□□□ -0.51
SMC4-209ENST00000468653 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
SMC4-209ENST00000468653 LINC00336Q6ZUF6 198 aa11.82□□□□□ -0.52
SMC4-209ENST00000468653 A0A1B0GV72 72 aa11.82□□□□□ -0.52
SMC4-209ENST00000468653 PRLHP81277 87 aa11.82□□□□□ -0.52
SMC4-209ENST00000468653 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
SMC4-209ENST00000468653 OBSCN-AS1Q96MR7 158 aa11.8□□□□□ -0.52
SMC4-209ENST00000468653 JMJD7-PLA2G4BH0Y9G9 81 aa11.79□□□□□ -0.52
SMC4-209ENST00000468653 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
SMC4-209ENST00000468653 UBE2AP49459 152 aa11.79□□□□□ -0.52
SMC4-209ENST00000468653 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
SMC4-209ENST00000468653 SACSQ9NZJ4 4579 aa11.78□□□□□ -0.52
SMC4-209ENST00000468653 BCE1O60756 84 aa11.78□□□□□ -0.52
SMC4-209ENST00000468653 ERC2-IT1O76042 136 aa11.78□□□□□ -0.52
SMC4-209ENST00000468653 KRTAP10-1P60331 282 aa11.78□□□□□ -0.52
SMC4-209ENST00000468653 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
SMC4-209ENST00000468653 FAM30AQ9NZY2 134 aa11.78□□□□□ -0.52
SMC4-209ENST00000468653 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.52
SMC4-209ENST00000468653 H0Y9J4 135 aa11.77□□□□□ -0.53
SMC4-209ENST00000468653 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
SMC4-209ENST00000468653 VPS25Q9BRG1 176 aa11.74□□□□□ -0.53
SMC4-209ENST00000468653 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
SMC4-209ENST00000468653 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
SMC4-209ENST00000468653 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
SMC4-209ENST00000468653 Q8N377 158 aa11.74□□□□□ -0.53
SMC4-209ENST00000468653 LINC01547P58512 204 aaPredicted RBP11.73□□□□□ -0.53
SMC4-209ENST00000468653 Q6ZSA8 131 aa11.73□□□□□ -0.53
SMC4-209ENST00000468653 CIRBP-AS1Q8TBR5 109 aa11.73□□□□□ -0.53
SMC4-209ENST00000468653 FAT2Q9NYQ8 4349 aa11.73□□□□□ -0.53
SMC4-209ENST00000468653 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
SMC4-209ENST00000468653 IGLV5-48A0A075B6I7 105 aa11.72□□□□□ -0.53
SMC4-209ENST00000468653 GAGE2AQ6NT46 116 aa11.7□□□□□ -0.54
SMC4-209ENST00000468653 SCXQ7RTU7 201 aa11.7□□□□□ -0.54
SMC4-209ENST00000468653 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
SMC4-209ENST00000468653 KRTAP13-1Q8IUC0 172 aa11.69□□□□□ -0.54
SMC4-209ENST00000468653 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
SMC4-209ENST00000468653 PKD1P98161 4303 aa11.67□□□□□ -0.54
SMC4-209ENST00000468653 FAM240AA0A1B0GVK7 77 aa11.67□□□□□ -0.54
SMC4-209ENST00000468653 DNAH5Q8TE73 4624 aa11.67□□□□□ -0.54
SMC4-209ENST00000468653 ACYP1P07311 99 aa11.66□□□□□ -0.54
SMC4-209ENST00000468653 HAMPP81172 84 aa11.66□□□□□ -0.54
SMC4-209ENST00000468653 CCKP06307 115 aa11.65□□□□□ -0.54
SMC4-209ENST00000468653 C3orf22Q8N5N4 141 aa11.65□□□□□ -0.54
SMC4-209ENST00000468653 LOC110117498A0A087WWA1 95 aa11.64□□□□□ -0.55
SMC4-209ENST00000468653 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
SMC4-209ENST00000468653 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
SMC4-209ENST00000468653 PDE6GP18545 87 aa11.63□□□□□ -0.55
SMC4-209ENST00000468653 Q6ZQT0 140 aa11.62□□□□□ -0.55
SMC4-209ENST00000468653 RYR2Q92736 4967 aa11.61□□□□□ -0.55
SMC4-209ENST00000468653 TRBV7-4A0A0J9YYF1 115 aa11.61□□□□□ -0.55
SMC4-209ENST00000468653 ZNF861PO60384 105 aa11.6□□□□□ -0.55
SMC4-209ENST00000468653 F8WEM9 126 aa11.59□□□□□ -0.55
SMC4-209ENST00000468653 SMIM29Q86T20 159 aa11.59□□□□□ -0.55
SMC4-209ENST00000468653 IGLV7-43P04211 117 aa11.58□□□□□ -0.56
SMC4-209ENST00000468653 DNAH8Q96JB1 4490 aa11.57□□□□□ -0.56
SMC4-209ENST00000468653 SPRR1BP22528 89 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms