RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TRAV12-1A0A0B4J245 112 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 H3BRM9 83 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 LINC01547P58512 204 aaPredicted RBP7.39□□□□□ -1.23
PTPN7-207ENST00000468385 RPL24P83731 157 aaKnown RBP7.39□□□□□ -1.23
PTPN7-207ENST00000468385 SLC25A34Q6PIV7 304 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 LINC00337Q8N6G1 96 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 HIGD2AQ9BW72 106 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
PTPN7-207ENST00000468385 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
PTPN7-207ENST00000468385 COX8AP10176 69 aa7.36□□□□□ -1.23
PTPN7-207ENST00000468385 PLNP26678 52 aa7.36□□□□□ -1.23
PTPN7-207ENST00000468385 COX17Q14061 63 aa7.36□□□□□ -1.23
PTPN7-207ENST00000468385 DAND5Q8N907 189 aa7.36□□□□□ -1.23
PTPN7-207ENST00000468385 Q8NBF4 154 aa7.36□□□□□ -1.23
PTPN7-207ENST00000468385 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
PTPN7-207ENST00000468385 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
PTPN7-207ENST00000468385 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
PTPN7-207ENST00000468385 SNHG12Q9BXW3 62 aa7.34□□□□□ -1.23
PTPN7-207ENST00000468385 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
PTPN7-207ENST00000468385 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
PTPN7-207ENST00000468385 NMUP48645 174 aa7.33□□□□□ -1.24
PTPN7-207ENST00000468385 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
PTPN7-207ENST00000468385 BATFQ16520 125 aa7.33□□□□□ -1.24
PTPN7-207ENST00000468385 ZNF706Q9Y5V0 76 aaPredicted RBP7.33□□□□□ -1.24
PTPN7-207ENST00000468385 DLEU1O43261 78 aa7.32□□□□□ -1.24
PTPN7-207ENST00000468385 SPINK1P00995 79 aa7.32□□□□□ -1.24
PTPN7-207ENST00000468385 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
PTPN7-207ENST00000468385 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
PTPN7-207ENST00000468385 HERVK_113P61574 105 aa7.3□□□□□ -1.24
PTPN7-207ENST00000468385 PRYO14603 147 aa7.29□□□□□ -1.24
PTPN7-207ENST00000468385 SPRR1AP35321 89 aa7.29□□□□□ -1.24
PTPN7-207ENST00000468385 COL5A1-AS1Q5SY13 56 aa7.29□□□□□ -1.24
PTPN7-207ENST00000468385 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
PTPN7-207ENST00000468385 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
PTPN7-207ENST00000468385 SMCR5Q8TEV8 140 aa7.29□□□□□ -1.24
PTPN7-207ENST00000468385 C11orf86A6NJI1 115 aa7.28□□□□□ -1.24
PTPN7-207ENST00000468385 LINC00158P58513 81 aa7.28□□□□□ -1.24
PTPN7-207ENST00000468385 LINC00483Q53H64 154 aa7.28□□□□□ -1.24
PTPN7-207ENST00000468385 A0A0U1RRA0 63 aa7.27□□□□□ -1.25
PTPN7-207ENST00000468385 KRTAP4-16G5E9R7 235 aaPredicted RBP7.27□□□□□ -1.25
PTPN7-207ENST00000468385 TMEM170BQ5T4T1 132 aa7.27□□□□□ -1.25
PTPN7-207ENST00000468385 Q8N377 158 aa7.27□□□□□ -1.25
PTPN7-207ENST00000468385 E9PLD3 99 aa7.26□□□□□ -1.25
PTPN7-207ENST00000468385 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
PTPN7-207ENST00000468385 XP32Q5T750 250 aa7.26□□□□□ -1.25
PTPN7-207ENST00000468385 KCNQ1DNQ9H478 68 aa7.26□□□□□ -1.25
PTPN7-207ENST00000468385 NDUFA12Q9UI09 145 aa7.26□□□□□ -1.25
PTPN7-207ENST00000468385 A0A1B0GV90 55 aa7.25□□□□□ -1.25
PTPN7-207ENST00000468385 C2orf91Q6ZV80 131 aa7.25□□□□□ -1.25
PTPN7-207ENST00000468385 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
PTPN7-207ENST00000468385 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 NCR3O14931 201 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 HSD52Q0P140 79 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 MOBPQ13875 183 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 BVES-AS1Q5T3Y7 98 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 GAGE2AQ6NT46 116 aa7.24□□□□□ -1.25
PTPN7-207ENST00000468385 IGLV9-49A0A0B4J1Y8 123 aa7.23□□□□□ -1.25
PTPN7-207ENST00000468385 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
PTPN7-207ENST00000468385 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
PTPN7-207ENST00000468385 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
PTPN7-207ENST00000468385 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
PTPN7-207ENST00000468385 TMEM223A0PJW6 202 aa7.22□□□□□ -1.25
PTPN7-207ENST00000468385 LEPROTO15243 131 aa7.22□□□□□ -1.25
PTPN7-207ENST00000468385 LGALS3P17931 250 aaKnown RBP7.22□□□□□ -1.25
PTPN7-207ENST00000468385 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 A6NDN8 102 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 ZNF815PA8K554 130 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 SLC25A20O43772 301 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 ERC2-IT1O76042 136 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 TAL2Q16559 108 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
PTPN7-207ENST00000468385 J3QQQ9 107 aa7.2□□□□□ -1.26
PTPN7-207ENST00000468385 MT1HP80294 61 aa7.2□□□□□ -1.26
PTPN7-207ENST00000468385 SCGB1D4Q6XE38 83 aa7.2□□□□□ -1.26
PTPN7-207ENST00000468385 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
PTPN7-207ENST00000468385 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
PTPN7-207ENST00000468385 CEND1Q8N111 149 aa7.18□□□□□ -1.26
PTPN7-207ENST00000468385 Q9BRP9 147 aa7.18□□□□□ -1.26
PTPN7-207ENST00000468385 HERV-K104P63124 156 aa7.15□□□□□ -1.26
PTPN7-207ENST00000468385 TAX1BP3O14907 124 aa7.14□□□□□ -1.27
PTPN7-207ENST00000468385 TRIAP1O43715 76 aa7.14□□□□□ -1.27
PTPN7-207ENST00000468385 CFC1BP0CG36 223 aa7.14□□□□□ -1.27
PTPN7-207ENST00000468385 TSPEAR-AS2P59090 65 aa7.14□□□□□ -1.27
PTPN7-207ENST00000468385 Q6ZRX8 168 aa7.14□□□□□ -1.27
PTPN7-207ENST00000468385 PCOTHQ58A44 107 aa7.13□□□□□ -1.27
PTPN7-207ENST00000468385 C9orf153Q5TBE3 101 aa7.13□□□□□ -1.27
PTPN7-207ENST00000468385 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
PTPN7-207ENST00000468385 IGLV8-61A0A075B6I0 122 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 TRBV10-2A0A0K0K1G8 114 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 FXYD2P54710 66 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 VAMP3Q15836 100 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 Q6ZVH6 145 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 RAB37Q96AX2 223 aa7.12□□□□□ -1.27
PTPN7-207ENST00000468385 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
PTPN7-207ENST00000468385 NHP2Q9NX24 153 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms