RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
SSBP1-207ENST00000468267 B5MCH6 92 aa9.91□□□□□ -0.82
SSBP1-207ENST00000468267 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
SSBP1-207ENST00000468267 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
SSBP1-207ENST00000468267 IGLV6-57P01721 117 aa9.9□□□□□ -0.82
SSBP1-207ENST00000468267 C3orf79P0CE67 100 aa9.9□□□□□ -0.82
SSBP1-207ENST00000468267 CTAG1AP78358 180 aa9.9□□□□□ -0.82
SSBP1-207ENST00000468267 NPC2P61916 151 aa9.89□□□□□ -0.83
SSBP1-207ENST00000468267 S100A7L2Q5SY68 101 aa9.89□□□□□ -0.83
SSBP1-207ENST00000468267 LITAFQ99732 161 aa9.88□□□□□ -0.83
SSBP1-207ENST00000468267 TIMM17BO60830 172 aa9.87□□□□□ -0.83
SSBP1-207ENST00000468267 KRTDAPP60985 99 aa9.86□□□□□ -0.83
SSBP1-207ENST00000468267 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
SSBP1-207ENST00000468267 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
SSBP1-207ENST00000468267 Q9BRP9 147 aa9.86□□□□□ -0.83
SSBP1-207ENST00000468267 PPDPFQ9H3Y8 114 aa9.86□□□□□ -0.83
SSBP1-207ENST00000468267 ZNF815PA8K554 130 aa9.85□□□□□ -0.83
SSBP1-207ENST00000468267 ERC2-IT1O76042 136 aa9.85□□□□□ -0.83
SSBP1-207ENST00000468267 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
SSBP1-207ENST00000468267 Q6ZRX8 168 aa9.85□□□□□ -0.83
SSBP1-207ENST00000468267 LINC00308Q8TCZ7 52 aa9.85□□□□□ -0.83
SSBP1-207ENST00000468267 TRAV23DV6A0A075B6W5 121 aa9.84□□□□□ -0.83
SSBP1-207ENST00000468267 GAGE2AQ6NT46 116 aa9.83□□□□□ -0.84
SSBP1-207ENST00000468267 TTTY13Q9BZ97 58 aa9.83□□□□□ -0.84
SSBP1-207ENST00000468267 SPANXCQ9NY87 97 aa9.83□□□□□ -0.84
SSBP1-207ENST00000468267 ZNF73O43830 326 aaPredicted RBP9.82□□□□□ -0.84
SSBP1-207ENST00000468267 JOSD1Q15040 202 aaPredicted RBP9.81□□□□□ -0.84
SSBP1-207ENST00000468267 Q8NBF4 154 aa9.81□□□□□ -0.84
SSBP1-207ENST00000468267 CBY1Q9Y3M2 126 aa9.81□□□□□ -0.84
SSBP1-207ENST00000468267 C20orf202A1L168 122 aa9.8□□□□□ -0.84
SSBP1-207ENST00000468267 MUC2Q02817 5179 aa9.8□□□□□ -0.84
SSBP1-207ENST00000468267 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
SSBP1-207ENST00000468267 IGLV7-46A0A075B6I9 117 aa9.77□□□□□ -0.85
SSBP1-207ENST00000468267 ANKRD39Q53RE8 183 aa9.77□□□□□ -0.85
SSBP1-207ENST00000468267 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-207ENST00000468267 ATOH7Q8N100 152 aa9.76□□□□□ -0.85
SSBP1-207ENST00000468267 KRTAP4-12Q9BQ66 201 aa9.76□□□□□ -0.85
SSBP1-207ENST00000468267 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
SSBP1-207ENST00000468267 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 A6NJY4 79 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 AKR1D1P51857 326 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 MOBPQ13875 183 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 TPRXLQ17RH7 258 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 LINC00518Q8N0U6 118 aa9.75□□□□□ -0.85
SSBP1-207ENST00000468267 C5orf52A6NGY3 159 aa9.74□□□□□ -0.85
SSBP1-207ENST00000468267 SPINK1P00995 79 aa9.74□□□□□ -0.85
SSBP1-207ENST00000468267 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
SSBP1-207ENST00000468267 IFITM1P13164 125 aa9.71□□□□□ -0.86
SSBP1-207ENST00000468267 S100A1P23297 94 aa9.71□□□□□ -0.86
SSBP1-207ENST00000468267 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-207ENST00000468267 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
SSBP1-207ENST00000468267 COPS9Q8WXC6 57 aa9.71□□□□□ -0.86
SSBP1-207ENST00000468267 DHRS4-AS1Q9P1J3 65 aa9.71□□□□□ -0.86
SSBP1-207ENST00000468267 Q6ZVH6 145 aa9.7□□□□□ -0.86
SSBP1-207ENST00000468267 HIST3H2BBQ8N257 126 aa9.7□□□□□ -0.86
SSBP1-207ENST00000468267 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
SSBP1-207ENST00000468267 MUC17Q685J3 4493 aa9.7□□□□□ -0.86
SSBP1-207ENST00000468267 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
SSBP1-207ENST00000468267 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
SSBP1-207ENST00000468267 RPS29P62273 56 aaKnown RBP9.68□□□□□ -0.86
SSBP1-207ENST00000468267 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
SSBP1-207ENST00000468267 HIST1H2BLQ99880 126 aa9.68□□□□□ -0.86
SSBP1-207ENST00000468267 COX7BP24311 80 aa9.67□□□□□ -0.86
SSBP1-207ENST00000468267 S100A2P29034 98 aa9.67□□□□□ -0.86
SSBP1-207ENST00000468267 LCE3BQ5TA77 95 aa9.67□□□□□ -0.86
SSBP1-207ENST00000468267 MUSTN1Q8IVN3 82 aa9.67□□□□□ -0.86
SSBP1-207ENST00000468267 SPRR1BP22528 89 aa9.66□□□□□ -0.86
SSBP1-207ENST00000468267 C9orf153Q5TBE3 101 aa9.66□□□□□ -0.86
SSBP1-207ENST00000468267 TRBV7-6A0A0J9YX20 115 aa9.65□□□□□ -0.86
SSBP1-207ENST00000468267 Q8N377 158 aa9.65□□□□□ -0.86
SSBP1-207ENST00000468267 A6NDN8 102 aa9.63□□□□□ -0.87
SSBP1-207ENST00000468267 SLC25A34Q6PIV7 304 aa9.63□□□□□ -0.87
SSBP1-207ENST00000468267 SLC25A20O43772 301 aa9.62□□□□□ -0.87
SSBP1-207ENST00000468267 S100A6P06703 90 aa9.62□□□□□ -0.87
SSBP1-207ENST00000468267 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
SSBP1-207ENST00000468267 HSBP1L1C9JCN9 74 aa9.61□□□□□ -0.87
SSBP1-207ENST00000468267 A0A1B0GWB2 263 aa9.6□□□□□ -0.87
SSBP1-207ENST00000468267 LAMTOR3Q9UHA4 124 aa9.6□□□□□ -0.87
SSBP1-207ENST00000468267 TRAV13-2A0A0B4J235 113 aa9.59□□□□□ -0.87
SSBP1-207ENST00000468267 TAL2Q16559 108 aa9.59□□□□□ -0.87
SSBP1-207ENST00000468267 A0A0U1RQV1 116 aa9.58□□□□□ -0.88
SSBP1-207ENST00000468267 DEFB105AQ8NG35 78 aa9.58□□□□□ -0.88
SSBP1-207ENST00000468267 TEX49A0A1B0GTD5 131 aa9.57□□□□□ -0.88
SSBP1-207ENST00000468267 A4D1N5 150 aa9.56□□□□□ -0.88
SSBP1-207ENST00000468267 SMIM11BQ8TCY0 68 aa9.56□□□□□ -0.88
SSBP1-207ENST00000468267 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
SSBP1-207ENST00000468267 KRTAP19-1Q8IUB9 90 aa9.55□□□□□ -0.88
SSBP1-207ENST00000468267 KRTAP9-9Q9BYP9 154 aa9.55□□□□□ -0.88
SSBP1-207ENST00000468267 KRTAP9-4Q9BYQ2 154 aa9.55□□□□□ -0.88
SSBP1-207ENST00000468267 Q1RN00 199 aa9.54□□□□□ -0.88
SSBP1-207ENST00000468267 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
SSBP1-207ENST00000468267 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-207ENST00000468267 IGLV5-48A0A075B6I7 105 aa9.52□□□□□ -0.89
SSBP1-207ENST00000468267 HRCT1Q6UXD1 115 aa9.52□□□□□ -0.89
SSBP1-207ENST00000468267 SMIM29Q86T20 159 aa9.52□□□□□ -0.89
SSBP1-207ENST00000468267 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
SSBP1-207ENST00000468267 CD164Q04900 197 aa9.5□□□□□ -0.89
SSBP1-207ENST00000468267 LIMD2Q9BT23 127 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms