RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 LST1O00453 97 aa4.52□□□□□ -1.69
SCAF4-204ENST00000467731 PRSS2P07478 247 aa4.52□□□□□ -1.69
SCAF4-204ENST00000467731 RBM3P98179 157 aaKnown RBP4.52□□□□□ -1.69
SCAF4-204ENST00000467731 Q6JHZ5 121 aa4.52□□□□□ -1.69
SCAF4-204ENST00000467731 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
SCAF4-204ENST00000467731 RTL8CO15255 209 aa4.52□□□□□ -1.69
SCAF4-204ENST00000467731 LGALS3P17931 250 aaKnown RBP4.52□□□□□ -1.69
SCAF4-204ENST00000467731 DNAH11Q96DT5 4516 aa4.52□□□□□ -1.69
SCAF4-204ENST00000467731 PKD1P98161 4303 aa4.51□□□□□ -1.69
SCAF4-204ENST00000467731 TOMM7Q9P0U1 55 aa4.51□□□□□ -1.69
SCAF4-204ENST00000467731 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
SCAF4-204ENST00000467731 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
SCAF4-204ENST00000467731 LRCOL1A6NCL2 159 aa4.51□□□□□ -1.69
SCAF4-204ENST00000467731 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
SCAF4-204ENST00000467731 HIGD2BQ4VC39 106 aa4.51□□□□□ -1.69
SCAF4-204ENST00000467731 INAFM2P0DMQ5 153 aa4.5□□□□□ -1.69
SCAF4-204ENST00000467731 DNAH5Q8TE73 4624 aa4.5□□□□□ -1.69
SCAF4-204ENST00000467731 GHRHP01286 108 aa4.5□□□□□ -1.69
SCAF4-204ENST00000467731 TNP2Q05952 138 aa4.5□□□□□ -1.69
SCAF4-204ENST00000467731 SPAG11BQ08648 103 aa4.5□□□□□ -1.69
SCAF4-204ENST00000467731 KIAA0087Q14695 138 aa4.5□□□□□ -1.69
SCAF4-204ENST00000467731 A0A087WTM6 91 aa4.49□□□□□ -1.69
SCAF4-204ENST00000467731 GVQW2A0A096LPI5 108 aaPredicted RBP4.49□□□□□ -1.69
SCAF4-204ENST00000467731 TSPEAR-AS2P59090 65 aa4.49□□□□□ -1.69
SCAF4-204ENST00000467731 KLKP1Q107X0 134 aa4.49□□□□□ -1.69
SCAF4-204ENST00000467731 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
SCAF4-204ENST00000467731 Q8IZM0 81 aa4.49□□□□□ -1.69
SCAF4-204ENST00000467731 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
SCAF4-204ENST00000467731 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
SCAF4-204ENST00000467731 A0A087WVE0 104 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 LEPROTO15243 131 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 NDUFC1O43677 76 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 BCE1O60756 84 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 Q8N814 137 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
SCAF4-204ENST00000467731 SLPIP03973 132 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 CLEC2BQ92478 149 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 CAMK2N2Q96S95 79 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 TRAV13-2A0A0B4J235 113 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 C8orf87E5RJ46 101 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 UNQ6190/PRO20217Q6UXQ8 127 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
SCAF4-204ENST00000467731 NDUFA1O15239 70 aa4.46□□□□□ -1.7
SCAF4-204ENST00000467731 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCAF4-204ENST00000467731 ZNF625Q96I27 306 aaPredicted RBP4.46□□□□□ -1.7
SCAF4-204ENST00000467731 S100A7L2Q5SY68 101 aa4.46□□□□□ -1.7
SCAF4-204ENST00000467731 TRAV7A0A075B6U4 112 aa4.45□□□□□ -1.7
SCAF4-204ENST00000467731 CNBPP62633 177 aaKnown RBP4.45□□□□□ -1.7
SCAF4-204ENST00000467731 SYCNQ0VAF6 134 aa4.45□□□□□ -1.7
SCAF4-204ENST00000467731 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
SCAF4-204ENST00000467731 F8WEM9 126 aa4.45□□□□□ -1.7
SCAF4-204ENST00000467731 M0R378 163 aa4.45□□□□□ -1.7
SCAF4-204ENST00000467731 C6orf48Q9UBA6 75 aa4.45□□□□□ -1.7
SCAF4-204ENST00000467731 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
SCAF4-204ENST00000467731 NDUFS5O43920 106 aa4.44□□□□□ -1.7
SCAF4-204ENST00000467731 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
SCAF4-204ENST00000467731 DNAL4O96015 105 aa4.44□□□□□ -1.7
SCAF4-204ENST00000467731 SERTAD4-AS1Q5TG53 156 aa4.44□□□□□ -1.7
SCAF4-204ENST00000467731 BAALC-AS2P0C853 105 aa4.43□□□□□ -1.7
SCAF4-204ENST00000467731 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
SCAF4-204ENST00000467731 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
SCAF4-204ENST00000467731 ADAMTSL4-AS1Q5T5F5 129 aa4.43□□□□□ -1.7
SCAF4-204ENST00000467731 ATP5EP2Q5VTU8 51 aa4.43□□□□□ -1.7
SCAF4-204ENST00000467731 C9orf163Q8N9P6 203 aa4.43□□□□□ -1.7
SCAF4-204ENST00000467731 LRP1BQ9NZR2 4599 aa4.42□□□□□ -1.7
SCAF4-204ENST00000467731 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
SCAF4-204ENST00000467731 FAM229BQ4G0N7 80 aa4.42□□□□□ -1.7
SCAF4-204ENST00000467731 TRAV23DV6A0A075B6W5 121 aa4.42□□□□□ -1.7
SCAF4-204ENST00000467731 A0A1B0GVY2 172 aa4.42□□□□□ -1.7
SCAF4-204ENST00000467731 LINC00846Q9NV44 126 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 TRBV10-3A0A0K0K1G6 114 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 LINC00158P58513 81 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 COX17Q14061 63 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 Q6ZRP5 223 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 TMEM256-PLSCR3K7ERE1 68 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 Q1T7F1 81 aa4.41□□□□□ -1.7
SCAF4-204ENST00000467731 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
SCAF4-204ENST00000467731 ZNF73O43830 326 aaPredicted RBP4.4□□□□□ -1.7
SCAF4-204ENST00000467731 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.7
SCAF4-204ENST00000467731 Q6ZVQ6 151 aa4.4□□□□□ -1.7
SCAF4-204ENST00000467731 MIR7-3HGQ8N6C7 128 aa4.4□□□□□ -1.7
SCAF4-204ENST00000467731 LITAFQ99732 161 aa4.4□□□□□ -1.7
SCAF4-204ENST00000467731 DYNC1H1Q14204 4646 aaKnown RBP4.4□□□□□ -1.71
SCAF4-204ENST00000467731 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.71
SCAF4-204ENST00000467731 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
SCAF4-204ENST00000467731 SNURFQ9Y675 71 aa4.4□□□□□ -1.71
SCAF4-204ENST00000467731 EPPK1P58107 5090 aaKnown RBP4.39□□□□□ -1.71
SCAF4-204ENST00000467731 A0A096LNI7 61 aa4.39□□□□□ -1.71
SCAF4-204ENST00000467731 XAGE1AQ9HD64 81 aa4.39□□□□□ -1.71
SCAF4-204ENST00000467731 IGKV2-24A0A0C4DH68 120 aa4.39□□□□□ -1.71
SCAF4-204ENST00000467731 UBE2BP63146 152 aa4.39□□□□□ -1.71
SCAF4-204ENST00000467731 C16orf90A8MZG2 172 aa4.38□□□□□ -1.71
SCAF4-204ENST00000467731 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
SCAF4-204ENST00000467731 SND1-IT1Q9HBX3 110 aa4.38□□□□□ -1.71
SCAF4-204ENST00000467731 PANO1I0J062 215 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms