RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ABCA4P78363 2273 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 HIVEP1P15822 2718 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 TRAV12-1A0A0B4J245 112 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 LCE6AA0A183 80 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 IGKV1-17P01599 117 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 CNBPP62633 177 aaKnown RBP3.49□□□□□ -1.85
LRCH3-212ENST00000466845 LYPD1Q8N2G4 141 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 UBALD1Q8TB05 177 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 MED13LQ71F56 2210 aa3.49□□□□□ -1.85
LRCH3-212ENST00000466845 ITPR3Q14573 2671 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 MTORP42345 2549 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 A0A1W2PPR1 153 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 DEFB108AA8MXU0 73 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 M0R3E3 92 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 FXYD3Q14802 87 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 FLNAP21333 2647 aaKnown RBP3.48□□□□□ -1.85
LRCH3-212ENST00000466845 CELSR1Q9NYQ6 3014 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 AKAP9Q99996 3911 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 CR1P17927 2039 aa3.48□□□□□ -1.85
LRCH3-212ENST00000466845 SETD2Q9BYW2 2564 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-212ENST00000466845 PRRC2AP48634 2157 aaKnown RBP3.47□□□□□ -1.85
LRCH3-212ENST00000466845 NUPR2A6NF83 97 aa3.47□□□□□ -1.85
LRCH3-212ENST00000466845 IGIPA6NJ69 53 aa3.47□□□□□ -1.85
LRCH3-212ENST00000466845 DMAC1Q96GE9 116 aa3.47□□□□□ -1.85
LRCH3-212ENST00000466845 AMELXQ99217 191 aa3.47□□□□□ -1.85
LRCH3-212ENST00000466845 RNF5Q99942 180 aa3.47□□□□□ -1.85
LRCH3-212ENST00000466845 MRPL36Q9P0J6 103 aaKnown RBP3.47□□□□□ -1.85
LRCH3-212ENST00000466845 TIMM8BQ9Y5J9 83 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-212ENST00000466845 HRNRQ86YZ3 2850 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-212ENST00000466845 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.85
LRCH3-212ENST00000466845 TRAV21A0A0B4J279 112 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 TRAV40A0A0B4J280 105 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 A0A1B0GU33 70 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 I3L3M4 83 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 M0R135 149 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 MRPL33O75394 65 aaKnown RBP3.46□□□□□ -1.86
LRCH3-212ENST00000466845 C9orf163Q8N9P6 203 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 ZCCHC13Q8WW36 166 aaKnown RBP3.46□□□□□ -1.86
LRCH3-212ENST00000466845 KLK12Q9UKR0 248 aa3.46□□□□□ -1.86
LRCH3-212ENST00000466845 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 F8VRH5 84 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
LRCH3-212ENST00000466845 Q5W150 140 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 SMR3AQ99954 134 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 UBL5Q9BZL1 73 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 TMEM14CQ9P0S9 112 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 ACANP16112 2415 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 NF1P21359 2839 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 MAP1AP78559 2803 aaPredicted RBP3.45□□□□□ -1.86
LRCH3-212ENST00000466845 NUP214P35658 2090 aaPredicted RBP3.45□□□□□ -1.86
LRCH3-212ENST00000466845 ARFGEF3Q5TH69 2177 aa3.45□□□□□ -1.86
LRCH3-212ENST00000466845 M0R1W7 72 aa3.44□□□□□ -1.86
LRCH3-212ENST00000466845 ERHP84090 104 aaKnown RBP3.44□□□□□ -1.86
LRCH3-212ENST00000466845 KRTAP21-3Q3LHN1 58 aa3.44□□□□□ -1.86
LRCH3-212ENST00000466845 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
LRCH3-212ENST00000466845 HIVEP2P31629 2446 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 ROS1P08922 2347 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 NAV3Q8IVL0 2385 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 NDUFB1O75438 58 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 IGLV7-43P04211 117 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 SPINK7P58062 85 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 WFDC9Q8NEX5 89 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 ABCA2Q9BZC7 2435 aa3.43□□□□□ -1.86
LRCH3-212ENST00000466845 NSD1Q96L73 2696 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-212ENST00000466845 USF3Q68DE3 2245 aa3.42□□□□□ -1.86
LRCH3-212ENST00000466845 A0A0J9YX75 114 aa3.42□□□□□ -1.86
LRCH3-212ENST00000466845 CTSGP08311 255 aa3.42□□□□□ -1.86
LRCH3-212ENST00000466845 CCL18P55774 89 aa3.42□□□□□ -1.86
LRCH3-212ENST00000466845 TLN2Q9Y4G6 2542 aa3.41□□□□□ -1.86
LRCH3-212ENST00000466845 NIPBLQ6KC79 2804 aaeCLIP3.41□□□□□ -1.86
LRCH3-212ENST00000466845 FREM1Q5H8C1 2179 aa3.41□□□□□ -1.86
LRCH3-212ENST00000466845 CPSF4LA6NMK7 179 aaKnown RBP3.41□□□□□ -1.86
LRCH3-212ENST00000466845 ARL14EPLP0DKL9 152 aa3.41□□□□□ -1.86
LRCH3-212ENST00000466845 CCL3L1P16619 93 aa3.4□□□□□ -1.87
LRCH3-212ENST00000466845 PRR14LQ5THK1 2151 aa3.4□□□□□ -1.87
LRCH3-212ENST00000466845 HCP5Q6MZN7 132 aa3.4□□□□□ -1.87
LRCH3-212ENST00000466845 HIGD2AQ9BW72 106 aa3.4□□□□□ -1.87
LRCH3-212ENST00000466845 JMJD1CQ15652 2540 aa3.4□□□□□ -1.87
LRCH3-212ENST00000466845 CADP27708 2225 aa3.4□□□□□ -1.87
LRCH3-212ENST00000466845 PLCE1Q9P212 2302 aa3.39□□□□□ -1.87
LRCH3-212ENST00000466845 FN1P02751 2386 aaKnown RBP3.39□□□□□ -1.87
LRCH3-212ENST00000466845 TRBV6-1A0A0K0K1D8 114 aa3.39□□□□□ -1.87
LRCH3-212ENST00000466845 NDUFA3O95167 84 aa3.39□□□□□ -1.87
LRCH3-212ENST00000466845 ZNF137PP52743 207 aa3.39□□□□□ -1.87
LRCH3-212ENST00000466845 PDE6HQ13956 83 aa3.39□□□□□ -1.87
LRCH3-212ENST00000466845 LINC00322Q6ZN03 302 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-212ENST00000466845 CSPG4Q6UVK1 2322 aa3.39□□□□□ -1.87
LRCH3-212ENST00000466845 SONP18583 2426 aaKnown RBP3.38□□□□□ -1.87
LRCH3-212ENST00000466845 IGKV3OR2-268A0A0C4DH90 116 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 H0Y9P7 68 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 IGKV3-15P01624 115 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 SPATA8Q6RVD6 105 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 ST20-AS1Q8NBB2 130 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 SPRR4Q96PI1 79 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 TMEM167BQ9NRX6 74 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms