RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CHD8Q9HCK8 2581 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 MUC2Q02817 5179 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 PTPN13Q12923 2485 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 DIP2AQ14689 1571 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 NWD1Q149M9 1564 aa0.62□□□□□ -2.31
CDC42BPA-211ENST00000466538 PCLOQ9Y6V0 5065 aa0.61□□□□□ -2.31
CDC42BPA-211ENST00000466538 SPTBN2O15020 2390 aa0.61□□□□□ -2.31
CDC42BPA-211ENST00000466538 NESP48681 1621 aa0.61□□□□□ -2.31
CDC42BPA-211ENST00000466538 PRH1P02810 166 aa0.61□□□□□ -2.31
CDC42BPA-211ENST00000466538 APLNQ9ULZ1 77 aa0.61□□□□□ -2.31
CDC42BPA-211ENST00000466538 TTC28Q96AY4 2481 aa0.61□□□□□ -2.31
CDC42BPA-211ENST00000466538 RNF17Q9BXT8 1623 aaKnown RBP0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 USF3Q68DE3 2245 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 SPRR1BP22528 89 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 SPRR1AP35321 89 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 DEFB109BQ30KR1 87 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 COX6B2Q6YFQ2 88 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 DEFB105AQ8NG35 78 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 S100ZQ8WXG8 99 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 HILPDAQ9Y5L2 63 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 NEBP20929 6669 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 NCOR1O75376 2440 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 TJP1Q07157 1748 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 PTPRZ1P23471 2315 aaPredicted RBP0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 CCDC180Q9P1Z9 1646 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 C2CD3Q4AC94 2353 aa0.6□□□□□ -2.31
CDC42BPA-211ENST00000466538 BPTFQ12830 3046 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 LMTK2Q8IWU2 1503 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 ANKRD50Q9ULJ7 1429 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 NDUFA4O00483 81 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 SMR3AQ99954 134 aa0.59□□□□□ -2.31
CDC42BPA-211ENST00000466538 SRCAPQ6ZRS2 3230 aa0.59□□□□□ -2.32
CDC42BPA-211ENST00000466538 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.32
CDC42BPA-211ENST00000466538 TNRC6CQ9HCJ0 1690 aaKnown RBP0.59□□□□□ -2.32
CDC42BPA-211ENST00000466538 PIEZO1Q92508 2521 aa0.59□□□□□ -2.32
CDC42BPA-211ENST00000466538 IGF2RP11717 2491 aa0.58□□□□□ -2.32
CDC42BPA-211ENST00000466538 ANKHD1Q8IWZ3 2542 aaKnown RBP0.58□□□□□ -2.32
CDC42BPA-211ENST00000466538 A0A087WWC5 75 aa0.58□□□□□ -2.32
CDC42BPA-211ENST00000466538 MRPL33O75394 65 aaKnown RBP0.58□□□□□ -2.32
CDC42BPA-211ENST00000466538 UBL5Q9BZL1 73 aa0.58□□□□□ -2.32
CDC42BPA-211ENST00000466538 GLI2P10070 1586 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 POLQO75417 2590 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 PIEZO2Q9H5I5 2752 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 ENHOQ6UWT2 76 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 HECTD1Q9ULT8 2610 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 KIAA1109Q2LD37 5005 aa0.57□□□□□ -2.32
CDC42BPA-211ENST00000466538 ABCA6Q8N139 1617 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 ABCA12Q86UK0 2595 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 MYO18BQ8IUG5 2567 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 SPTBN1Q01082 2364 aaKnown RBP0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 CELSR2Q9HCU4 2923 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 H1FX-AS1Q4G0G2 97 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 PTPRQQ9UMZ3 2332 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 BDP1A6H8Y1 2624 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 ITPR3Q14573 2671 aa0.56□□□□□ -2.32
CDC42BPA-211ENST00000466538 HFM1A2PYH4 1435 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 EPG5Q9HCE0 2579 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 DDX60LQ5H9U9 1706 aaKnown RBP0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 RALGAPBQ86X10 1494 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 NAV2Q8IVL1 2488 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 THOC2Q8NI27 1593 aaKnown RBP0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 C3orf79P0CE67 100 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 KLK9Q2XQG4 91 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 SMIM5Q71RC9 77 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
CDC42BPA-211ENST00000466538 PKDREJQ9NTG1 2253 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 TIAM1Q13009 1591 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 APCP25054 2843 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 KIF1AQ12756 1690 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 TNRC18O15417 2968 aaPredicted RBP0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 NDUFA3O95167 84 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 LELP1Q5T871 98 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 PRO3102Q9H379 93 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 U3KQA8 63 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 C4AP0C0L4 1744 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 C4BP0C0L5 1744 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 ANKRD11Q6UB99 2663 aaPredicted RBP0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 ZNF292O60281 2723 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 CCDC168Q8NDH2 2452 aa0.54□□□□□ -2.32
CDC42BPA-211ENST00000466538 AKAP6Q13023 2319 aa0.53□□□□□ -2.32
CDC42BPA-211ENST00000466538 LINC00158P58513 81 aa0.53□□□□□ -2.32
CDC42BPA-211ENST00000466538 WFDC13Q8IUB5 93 aa0.53□□□□□ -2.32
CDC42BPA-211ENST00000466538 TNCP24821 2201 aa0.53□□□□□ -2.33
CDC42BPA-211ENST00000466538 DOPEY1Q5JWR5 2465 aa0.53□□□□□ -2.33
CDC42BPA-211ENST00000466538 SPTBN4Q9H254 2564 aa0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 FLNBO75369 2602 aaKnown RBP0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 PDZD2O15018 2839 aa0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 WDFY4Q6ZS81 3184 aa0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 LRRK2Q5S007 2527 aa0.52□□□□□ -2.33
CDC42BPA-211ENST00000466538 DEFB131BA0A096LNP1 70 aa0.52□□□□□ -2.33
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