RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 KIAA1551Q9HCM1 1747 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 UBR3Q6ZT12 1888 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 IQCF6A8MYZ5 107 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 MT1HP80294 61 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 PEA15Q15121 130 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 GAFA1Q96PS6 74 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 S4R3F8 94 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 TACC2O95359 2948 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 PDE4DIPQ5VU43 2346 aa-0.47□□□□□ -2.48
SSB-207ENST00000465871 HERC2O95714 4834 aa-0.47□□□□□ -2.49
SSB-207ENST00000465871 HTTP42858 3142 aa-0.47□□□□□ -2.49
SSB-207ENST00000465871 DNAH6Q9C0G6 4158 aa-0.47□□□□□ -2.49
SSB-207ENST00000465871 USP9YO00507 2555 aaPredicted RBP-0.48□□□□□ -2.49
SSB-207ENST00000465871 A0A1B0GUT8 65 aa-0.48□□□□□ -2.49
SSB-207ENST00000465871 H0YAA0 97 aa-0.48□□□□□ -2.49
SSB-207ENST00000465871 GYPAP02724 150 aa-0.48□□□□□ -2.49
SSB-207ENST00000465871 HMGN2P05204 90 aaKnown RBP-0.48□□□□□ -2.49
SSB-207ENST00000465871 LYSTQ99698 3801 aa-0.48□□□□□ -2.49
SSB-207ENST00000465871 PKD1P98161 4303 aa-0.48□□□□□ -2.49
SSB-207ENST00000465871 MAGI2Q86UL8 1455 aa-0.48□□□□□ -2.49
SSB-207ENST00000465871 CLTCQ00610 1675 aaKnown RBP-0.49□□□□□ -2.49
SSB-207ENST00000465871 CRYBG1Q9Y4K1 1723 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 BCORQ6W2J9 1755 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.49□□□□□ -2.49
SSB-207ENST00000465871 CYB5AP00167 134 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 C3orf79P0CE67 100 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 PKIAP61925 76 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 PLGLAQ15195 96 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 COX6B2Q6YFQ2 88 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 SNHG12Q9BXW3 62 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 MYH4Q9Y623 1939 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 TNRC18O15417 2968 aaPredicted RBP-0.49□□□□□ -2.49
SSB-207ENST00000465871 PCLOQ9Y6V0 5065 aa-0.49□□□□□ -2.49
SSB-207ENST00000465871 MYO18BQ8IUG5 2567 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 HECTD1Q9ULT8 2610 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 NDUFA3O95167 84 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 S100A8P05109 93 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 CLPSL2Q6UWE3 100 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 C20orf78Q9BR46 151 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 PRO3102Q9H379 93 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 ABCC10Q5T3U5 1492 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 PEG3Q9GZU2 1588 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 MTORP42345 2549 aa-0.5□□□□□ -2.49
SSB-207ENST00000465871 ATP10BO94823 1461 aa-0.51□□□□□ -2.49
SSB-207ENST00000465871 EPRSP07814 1512 aaKnown RBP-0.51□□□□□ -2.49
SSB-207ENST00000465871 MT1HL1P0DM35 61 aa-0.51□□□□□ -2.49
SSB-207ENST00000465871 LRRC7Q96NW7 1537 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 FANCAO15360 1455 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 LINC00158P58513 81 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 PRLHP81277 87 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 WFDC9Q8NEX5 89 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 Q9H521 79 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 MGAM2Q2M2H8 2515 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 LAMA1P25391 3075 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 ZZEF1O43149 2961 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 RGPD2P0DJD1 1756 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 PKD1L3Q7Z443 1732 aa-0.52□□□□□ -2.49
SSB-207ENST00000465871 CCDC168Q8NDH2 2452 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 CICQ96RK0 1608 aaPredicted RBP-0.53□□□□□ -2.49
SSB-207ENST00000465871 PTPN23Q9H3S7 1636 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 LRRC9Q6ZRR7 1453 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 DNAH3Q8TD57 4116 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 IFI6P09912 130 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.53□□□□□ -2.49
SSB-207ENST00000465871 UBR4Q5T4S7 5183 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 ADAMTS12P58397 1594 aa-0.53□□□□□ -2.49
SSB-207ENST00000465871 NEBP20929 6669 aa-0.54□□□□□ -2.5
SSB-207ENST00000465871 LAMA2P24043 3122 aaKnown RBP-0.54□□□□□ -2.5
SSB-207ENST00000465871 TRAV21A0A0B4J279 112 aa-0.54□□□□□ -2.5
SSB-207ENST00000465871 NEXMIFQ5QGS0 1516 aa-0.54□□□□□ -2.5
SSB-207ENST00000465871 RIF1Q5UIP0 2472 aaKnown RBP-0.55□□□□□ -2.5
SSB-207ENST00000465871 MMP24-AS1A0A0U1RRL7 71 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 MYMXA0A1B0GTQ4 84 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 TNP1P09430 55 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 MT1XP80297 61 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.55□□□□□ -2.5
SSB-207ENST00000465871 STARD9Q9P2P6 4700 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 ATP7BP35670 1465 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 QSER1Q2KHR3 1735 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 USP9XQ93008 2570 aaPredicted RBP-0.55□□□□□ -2.5
SSB-207ENST00000465871 VPS8Q8N3P4 1428 aa-0.55□□□□□ -2.5
SSB-207ENST00000465871 NIPBLQ6KC79 2804 aaeCLIP-0.56□□□□□ -2.5
SSB-207ENST00000465871 PREX1Q8TCU6 1659 aa-0.56□□□□□ -2.5
SSB-207ENST00000465871 PKD1L2Q7Z442 2459 aa-0.56□□□□□ -2.5
SSB-207ENST00000465871 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
SSB-207ENST00000465871 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
SSB-207ENST00000465871 PYY3Q5JQD4 70 aa-0.56□□□□□ -2.5
SSB-207ENST00000465871 DEFB106AQ8N104 65 aa-0.56□□□□□ -2.5
SSB-207ENST00000465871 ALKQ9UM73 1620 aa-0.56□□□□□ -2.5
SSB-207ENST00000465871 USH2AO75445 5202 aa-0.57□□□□□ -2.5
SSB-207ENST00000465871 S100A16Q96FQ6 103 aaKnown RBP-0.57□□□□□ -2.5
SSB-207ENST00000465871 CUBNO60494 3623 aa-0.57□□□□□ -2.5
SSB-207ENST00000465871 PKHD1L1Q86WI1 4243 aa-0.57□□□□□ -2.5
SSB-207ENST00000465871 RGPD8O14715 1765 aaPredicted RBP-0.57□□□□□ -2.5
SSB-207ENST00000465871 RGPD5Q99666 1765 aa-0.57□□□□□ -2.5
SSB-207ENST00000465871 DNAH9Q9NYC9 4486 aa-0.58□□□□□ -2.5
SSB-207ENST00000465871 DSPP15924 2871 aaKnown RBP-0.58□□□□□ -2.5
SSB-207ENST00000465871 ANKRD11Q6UB99 2663 aaPredicted RBP-0.58□□□□□ -2.5
SSB-207ENST00000465871 CEBPZOSA8MTT3 80 aa-0.58□□□□□ -2.5
SSB-207ENST00000465871 IFI27P40305 119 aaPredicted RBP-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms