RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TSPAN13O95857 204 aa10.76□□□□□ -0.69
PTPRU-206ENST00000465525 UBE2BP63146 152 aa10.76□□□□□ -0.69
PTPRU-206ENST00000465525 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
PTPRU-206ENST00000465525 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
PTPRU-206ENST00000465525 APOBP04114 4563 aaKnown RBP10.74□□□□□ -0.69
PTPRU-206ENST00000465525 Q1RN00 199 aa10.73□□□□□ -0.69
PTPRU-206ENST00000465525 BIRC6Q9NR09 4857 aa10.72□□□□□ -0.69
PTPRU-206ENST00000465525 SMIM11BQ8TCY0 68 aa10.72□□□□□ -0.69
PTPRU-206ENST00000465525 TRAV23DV6A0A075B6W5 121 aa10.71□□□□□ -0.69
PTPRU-206ENST00000465525 TRBV20-1A0A075B6N2 111 aa10.69□□□□□ -0.7
PTPRU-206ENST00000465525 F8W1H4 67 aa10.69□□□□□ -0.7
PTPRU-206ENST00000465525 KCNQ1DNQ9H478 68 aa10.69□□□□□ -0.7
PTPRU-206ENST00000465525 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
PTPRU-206ENST00000465525 RYR1P21817 5038 aa10.67□□□□□ -0.7
PTPRU-206ENST00000465525 PRYO14603 147 aa10.67□□□□□ -0.7
PTPRU-206ENST00000465525 PSMB2P49721 201 aa10.67□□□□□ -0.7
PTPRU-206ENST00000465525 REG3GQ6UW15 175 aa10.67□□□□□ -0.7
PTPRU-206ENST00000465525 KIAA1109Q2LD37 5005 aa10.67□□□□□ -0.7
PTPRU-206ENST00000465525 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
PTPRU-206ENST00000465525 SCGB1C2P0DMR2 95 aa10.66□□□□□ -0.7
PTPRU-206ENST00000465525 C6orf99Q4VX62 202 aa10.66□□□□□ -0.7
PTPRU-206ENST00000465525 H3BMG7 143 aa10.66□□□□□ -0.7
PTPRU-206ENST00000465525 PSORS1C2Q9UIG4 136 aa10.66□□□□□ -0.7
PTPRU-206ENST00000465525 TRIAP1O43715 76 aa10.65□□□□□ -0.7
PTPRU-206ENST00000465525 RPL28P46779 137 aaKnown RBP10.64□□□□□ -0.71
PTPRU-206ENST00000465525 DIRC1Q969H9 104 aa10.64□□□□□ -0.71
PTPRU-206ENST00000465525 OCIAD2Q56VL3 154 aa10.63□□□□□ -0.71
PTPRU-206ENST00000465525 K7ERU9 68 aa10.62□□□□□ -0.71
PTPRU-206ENST00000465525 COX6CP09669 75 aa10.62□□□□□ -0.71
PTPRU-206ENST00000465525 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
PTPRU-206ENST00000465525 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
PTPRU-206ENST00000465525 ETDCA0A1B0GVM5 59 aa10.61□□□□□ -0.71
PTPRU-206ENST00000465525 SPRR1AP35321 89 aa10.61□□□□□ -0.71
PTPRU-206ENST00000465525 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
PTPRU-206ENST00000465525 CBY1Q9Y3M2 126 aa10.61□□□□□ -0.71
PTPRU-206ENST00000465525 HSPG2P98160 4391 aa10.61□□□□□ -0.71
PTPRU-206ENST00000465525 KRTAP4-16G5E9R7 235 aaPredicted RBP10.6□□□□□ -0.71
PTPRU-206ENST00000465525 TCL1BO95988 128 aa10.6□□□□□ -0.71
PTPRU-206ENST00000465525 PRLHP81277 87 aa10.6□□□□□ -0.71
PTPRU-206ENST00000465525 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
PTPRU-206ENST00000465525 BCE1O60756 84 aa10.59□□□□□ -0.71
PTPRU-206ENST00000465525 COX7BP24311 80 aa10.59□□□□□ -0.71
PTPRU-206ENST00000465525 PRO0461Q9UI25 63 aa10.59□□□□□ -0.71
PTPRU-206ENST00000465525 B5MCH6 92 aa10.58□□□□□ -0.72
PTPRU-206ENST00000465525 ATXN8Q156A1 80 aa10.58□□□□□ -0.72
PTPRU-206ENST00000465525 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
PTPRU-206ENST00000465525 UBE2AP49459 152 aa10.57□□□□□ -0.72
PTPRU-206ENST00000465525 ELOF1P60002 83 aaKnown RBP10.57□□□□□ -0.72
PTPRU-206ENST00000465525 RPL37AP61513 92 aaKnown RBP10.56□□□□□ -0.72
PTPRU-206ENST00000465525 Q8N1X5 172 aa10.56□□□□□ -0.72
PTPRU-206ENST00000465525 Q6ZRX8 168 aa10.55□□□□□ -0.72
PTPRU-206ENST00000465525 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
PTPRU-206ENST00000465525 TRBV7-6A0A0J9YX20 115 aa10.53□□□□□ -0.72
PTPRU-206ENST00000465525 PLA2G1BP04054 148 aaKnown RBP10.53□□□□□ -0.72
PTPRU-206ENST00000465525 Q9BRP9 147 aa10.53□□□□□ -0.72
PTPRU-206ENST00000465525 FAT1Q14517 4588 aa10.53□□□□□ -0.72
PTPRU-206ENST00000465525 J3QR89 54 aa10.53□□□□□ -0.72
PTPRU-206ENST00000465525 IGLV7-43P04211 117 aa10.53□□□□□ -0.72
PTPRU-206ENST00000465525 KRTAP17-1Q9BYP8 105 aa10.53□□□□□ -0.72
PTPRU-206ENST00000465525 Q5VSD8 79 aa10.52□□□□□ -0.73
PTPRU-206ENST00000465525 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
PTPRU-206ENST00000465525 HIGD2AQ9BW72 106 aa10.52□□□□□ -0.73
PTPRU-206ENST00000465525 H0YGX0 51 aa10.51□□□□□ -0.73
PTPRU-206ENST00000465525 ETDBQ3ZM63 59 aa10.51□□□□□ -0.73
PTPRU-206ENST00000465525 LINC00575Q6W349 94 aa10.51□□□□□ -0.73
PTPRU-206ENST00000465525 VPS13BQ7Z7G8 4022 aa10.51□□□□□ -0.73
PTPRU-206ENST00000465525 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
PTPRU-206ENST00000465525 MTURNQ8N3F0 131 aa10.5□□□□□ -0.73
PTPRU-206ENST00000465525 SMCR5Q8TEV8 140 aa10.5□□□□□ -0.73
PTPRU-206ENST00000465525 C9JAW5 83 aa10.49□□□□□ -0.73
PTPRU-206ENST00000465525 SLC25A20O43772 301 aa10.49□□□□□ -0.73
PTPRU-206ENST00000465525 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
PTPRU-206ENST00000465525 SRRM2Q9UQ35 2752 aaKnown RBP10.49□□□□□ -0.73
PTPRU-206ENST00000465525 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
PTPRU-206ENST00000465525 HERC2O95714 4834 aa10.48□□□□□ -0.73
PTPRU-206ENST00000465525 H0Y9J4 135 aa10.47□□□□□ -0.73
PTPRU-206ENST00000465525 LST1O00453 97 aa10.47□□□□□ -0.73
PTPRU-206ENST00000465525 ZNF861PO60384 105 aa10.47□□□□□ -0.73
PTPRU-206ENST00000465525 LINC01600Q96MT4 127 aa10.47□□□□□ -0.73
PTPRU-206ENST00000465525 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
PTPRU-206ENST00000465525 TEN1Q86WV5 123 aa10.47□□□□□ -0.73
PTPRU-206ENST00000465525 DHRS4-AS1Q9P1J3 65 aa10.46□□□□□ -0.74
PTPRU-206ENST00000465525 ANKRD29Q8N6D5 301 aa10.45□□□□□ -0.74
PTPRU-206ENST00000465525 ST20-AS1Q8NBB2 130 aa10.45□□□□□ -0.74
PTPRU-206ENST00000465525 VPS25Q9BRG1 176 aa10.45□□□□□ -0.74
PTPRU-206ENST00000465525 H3BT86 120 aa10.44□□□□□ -0.74
PTPRU-206ENST00000465525 INAFM2P0DMQ5 153 aa10.44□□□□□ -0.74
PTPRU-206ENST00000465525 PPDPFLQ8WWR9 84 aa10.44□□□□□ -0.74
PTPRU-206ENST00000465525 Q6ZQY7 126 aa10.42□□□□□ -0.74
PTPRU-206ENST00000465525 TRACP01848 142 aa10.41□□□□□ -0.74
PTPRU-206ENST00000465525 DEFB105AQ8NG35 78 aa10.41□□□□□ -0.74
PTPRU-206ENST00000465525 SNCGO76070 127 aa10.39□□□□□ -0.75
PTPRU-206ENST00000465525 DNAL4O96015 105 aa10.39□□□□□ -0.75
PTPRU-206ENST00000465525 SPINK6Q6UWN8 80 aa10.39□□□□□ -0.75
PTPRU-206ENST00000465525 A0A1B0GX51 115 aa10.38□□□□□ -0.75
PTPRU-206ENST00000465525 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
PTPRU-206ENST00000465525 GAGE2AQ6NT46 116 aa10.37□□□□□ -0.75
PTPRU-206ENST00000465525 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.37□□□□□ -0.75
PTPRU-206ENST00000465525 ANAPC11Q9NYG5 84 aa10.36□□□□□ -0.75
PTPRU-206ENST00000465525 SPRR4Q96PI1 79 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms